View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10888_low_3 (Length: 225)

Name: NF10888_low_3
Description: NF10888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10888_low_3
NF10888_low_3
[»] chr1 (42 HSPs)
chr1 (130-206)||(18438427-18438503)
chr1 (130-206)||(18449285-18449361)
chr1 (130-206)||(18454378-18454454)
chr1 (19-114)||(5845503-5845599)
chr1 (18-128)||(11828201-11828310)
chr1 (19-125)||(41459215-41459322)
chr1 (19-125)||(13147457-13147565)
chr1 (19-112)||(23603455-23603549)
chr1 (19-128)||(26606760-26606870)
chr1 (19-77)||(36183858-36183916)
chr1 (59-128)||(3941151-3941221)
chr1 (87-128)||(45943727-45943768)
chr1 (19-111)||(50269122-50269215)
chr1 (19-76)||(50513930-50513987)
chr1 (26-109)||(23604252-23604336)
chr1 (19-51)||(38878535-38878567)
chr1 (89-128)||(13633902-13633941)
chr1 (17-128)||(16270026-16270137)
chr1 (91-126)||(23276111-23276146)
chr1 (59-125)||(41804037-41804104)
chr1 (91-126)||(42572762-42572797)
chr1 (59-124)||(1167564-1167630)
chr1 (91-137)||(3944009-3944055)
chr1 (91-137)||(3993835-3993881)
chr1 (78-128)||(6562868-6562918)
chr1 (91-128)||(3728770-3728807)
chr1 (91-128)||(8548670-8548707)
chr1 (91-128)||(13636123-13636160)
chr1 (91-128)||(15051349-15051386)
chr1 (91-128)||(22524161-22524198)
chr1 (91-128)||(23359350-23359387)
chr1 (91-128)||(24364726-24364763)
chr1 (91-128)||(26633562-26633599)
chr1 (91-128)||(29424415-29424452)
chr1 (91-128)||(29425337-29425374)
chr1 (91-128)||(29438021-29438058)
chr1 (91-128)||(36072404-36072441)
chr1 (91-128)||(44336284-44336321)
chr1 (91-128)||(46217319-46217356)
chr1 (91-128)||(52802165-52802202)
chr1 (19-51)||(5844638-5844670)
chr1 (91-127)||(26879297-26879333)
[»] chr8 (22 HSPs)
chr8 (18-128)||(40039685-40039796)
chr8 (18-128)||(40039087-40039198)
chr8 (19-77)||(5680469-5680527)
chr8 (87-128)||(26451511-26451552)
chr8 (91-128)||(32383206-32383243)
chr8 (91-128)||(32437161-32437198)
chr8 (19-64)||(33482725-33482770)
chr8 (19-51)||(27411633-27411665)
chr8 (85-128)||(40077251-40077294)
chr8 (91-137)||(8419439-8419485)
chr8 (59-128)||(21406269-21406339)
chr8 (59-128)||(21800761-21800831)
chr8 (91-137)||(32375686-32375732)
chr8 (86-128)||(41016444-41016486)
chr8 (91-128)||(184553-184590)
chr8 (91-128)||(22550866-22550903)
chr8 (91-128)||(26663034-26663071)
chr8 (91-128)||(34366946-34366983)
chr8 (91-128)||(42602495-42602532)
chr8 (21-49)||(21175745-21175773)
chr8 (91-127)||(36677931-36677967)
chr8 (96-128)||(38134405-38134437)
[»] chr7 (19 HSPs)
chr7 (19-128)||(20353931-20354040)
chr7 (91-137)||(30791000-30791046)
chr7 (95-128)||(17838689-17838722)
chr7 (18-83)||(20353330-20353395)
chr7 (87-128)||(47060957-47060998)
chr7 (80-124)||(31324811-31324855)
chr7 (85-128)||(17840891-17840934)
chr7 (20-114)||(36805500-36805595)
chr7 (85-128)||(42499438-42499481)
chr7 (91-137)||(45767853-45767899)
chr7 (80-125)||(8522140-8522185)
chr7 (91-128)||(9367725-9367762)
chr7 (91-128)||(15070390-15070427)
chr7 (91-128)||(18105408-18105445)
chr7 (91-128)||(30355240-30355277)
chr7 (91-128)||(35606824-35606861)
chr7 (19-51)||(7953836-7953868)
chr7 (80-128)||(36781450-36781498)
chr7 (88-128)||(41047809-41047849)
[»] chr5 (22 HSPs)
chr5 (22-128)||(27532618-27532725)
chr5 (19-110)||(30966053-30966144)
chr5 (131-180)||(31609846-31609895)
chr5 (87-128)||(18307285-18307326)
chr5 (91-128)||(38968130-38968167)
chr5 (91-127)||(35926397-35926433)
chr5 (81-128)||(3603149-3603196)
chr5 (85-128)||(25890023-25890066)
chr5 (74-124)||(42099087-42099137)
chr5 (91-128)||(1035219-1035256)
chr5 (91-128)||(7757360-7757397)
chr5 (91-128)||(13837759-13837796)
chr5 (91-128)||(13838425-13838462)
chr5 (85-126)||(17966889-17966930)
chr5 (91-128)||(19037471-19037508)
chr5 (91-128)||(28238174-28238211)
chr5 (91-128)||(28388520-28388557)
chr5 (91-128)||(30708874-30708911)
chr5 (92-128)||(27659976-27660012)
chr5 (89-129)||(30705167-30705207)
chr5 (91-127)||(38855713-38855749)
chr5 (59-114)||(42098305-42098361)
[»] chr4 (37 HSPs)
chr4 (18-128)||(26791609-26791721)
chr4 (19-110)||(40335155-40335247)
chr4 (19-128)||(41933623-41933733)
chr4 (22-113)||(48578172-48578264)
chr4 (19-109)||(35075927-35076018)
chr4 (17-113)||(14297106-14297202)
chr4 (17-113)||(14315355-14315451)
chr4 (26-128)||(11084008-11084111)
chr4 (17-105)||(72529-72618)
chr4 (91-128)||(16984162-16984199)
chr4 (18-51)||(31242830-31242863)
chr4 (91-126)||(9013874-9013909)
chr4 (69-128)||(11494556-11494615)
chr4 (89-128)||(26932617-26932656)
chr4 (19-77)||(36003608-36003666)
chr4 (92-126)||(49422171-49422205)
chr4 (91-128)||(958595-958632)
chr4 (91-128)||(6178111-6178148)
chr4 (91-128)||(9890029-9890066)
chr4 (91-128)||(15995757-15995794)
chr4 (91-128)||(19069222-19069259)
chr4 (91-128)||(21022889-21022926)
chr4 (79-128)||(21470926-21470975)
chr4 (91-128)||(30726742-30726779)
chr4 (91-128)||(31425319-31425356)
chr4 (79-128)||(33383828-33383877)
chr4 (91-128)||(37022062-37022099)
chr4 (91-128)||(37563281-37563318)
chr4 (91-128)||(39590569-39590606)
chr4 (91-128)||(39773439-39773476)
chr4 (91-128)||(40358281-40358318)
chr4 (91-128)||(41795357-41795394)
chr4 (91-128)||(44561331-44561368)
chr4 (91-128)||(49094119-49094156)
chr4 (91-128)||(54634016-54634053)
chr4 (19-82)||(30836652-30836716)
chr4 (96-128)||(31242786-31242818)
[»] chr6 (18 HSPs)
chr6 (19-124)||(31496196-31496302)
chr6 (19-124)||(31501582-31501688)
chr6 (24-124)||(32555593-32555693)
chr6 (62-124)||(3380775-3380838)
chr6 (22-76)||(32555064-32555118)
chr6 (19-125)||(33052499-33052605)
chr6 (91-126)||(28362734-28362769)
chr6 (23-124)||(31480328-31480430)
chr6 (19-77)||(31516943-31517001)
chr6 (91-128)||(6204862-6204899)
chr6 (91-128)||(9048110-9048147)
chr6 (91-128)||(9049085-9049122)
chr6 (91-128)||(11691829-11691866)
chr6 (91-128)||(13382664-13382701)
chr6 (91-128)||(18351644-18351681)
chr6 (91-128)||(22305143-22305180)
chr6 (91-128)||(26712083-26712120)
chr6 (91-128)||(28249920-28249957)
[»] chr3 (44 HSPs)
chr3 (19-124)||(45507402-45507508)
chr3 (19-77)||(45506605-45506663)
chr3 (19-128)||(2830990-2831100)
chr3 (26-128)||(31890243-31890345)
chr3 (87-129)||(42760209-42760251)
chr3 (58-126)||(30256006-30256075)
chr3 (79-128)||(52570567-52570616)
chr3 (21-124)||(51325944-51326048)
chr3 (93-128)||(29929463-29929498)
chr3 (93-128)||(29978617-29978652)
chr3 (89-128)||(48566375-48566414)
chr3 (90-124)||(16861190-16861224)
chr3 (91-137)||(30943224-30943270)
chr3 (152-194)||(38992365-38992407)
chr3 (91-125)||(49196453-49196487)
chr3 (19-128)||(50604421-50604531)
chr3 (91-128)||(2647700-2647737)
chr3 (91-128)||(9429850-9429887)
chr3 (91-128)||(19341079-19341116)
chr3 (91-128)||(19440291-19440328)
chr3 (91-128)||(20918012-20918049)
chr3 (91-128)||(20926974-20927011)
chr3 (91-128)||(29918342-29918379)
chr3 (91-128)||(29967495-29967532)
chr3 (91-128)||(32593113-32593150)
chr3 (91-128)||(34049115-34049152)
chr3 (91-128)||(35743583-35743620)
chr3 (91-128)||(36812872-36812909)
chr3 (91-128)||(41579725-41579762)
chr3 (91-128)||(41803033-41803070)
chr3 (91-128)||(41844365-41844402)
chr3 (91-128)||(42756194-42756231)
chr3 (91-128)||(43476227-43476264)
chr3 (91-128)||(44227147-44227184)
chr3 (91-128)||(46697746-46697783)
chr3 (89-126)||(48566401-48566438)
chr3 (91-128)||(50477215-50477252)
chr3 (19-48)||(51326726-51326755)
chr3 (91-128)||(54389830-54389867)
chr3 (80-128)||(1294078-1294126)
chr3 (91-127)||(3501897-3501933)
chr3 (90-126)||(16861162-16861198)
chr3 (23-51)||(40872040-40872068)
chr3 (88-128)||(51402399-51402439)
[»] chr2 (26 HSPs)
chr2 (18-112)||(40055338-40055433)
chr2 (159-209)||(31320110-31320160)
chr2 (19-77)||(37893423-37893481)
chr2 (91-128)||(41183225-41183262)
chr2 (89-137)||(5351724-5351772)
chr2 (22-109)||(19848140-19848228)
chr2 (19-124)||(25515813-25515920)
chr2 (91-130)||(2983435-2983474)
chr2 (19-77)||(37893148-37893206)
chr2 (95-128)||(435381-435414)
chr2 (19-48)||(7780416-7780445)
chr2 (91-128)||(12908430-12908467)
chr2 (91-128)||(17424167-17424204)
chr2 (91-128)||(22003402-22003439)
chr2 (91-128)||(23347329-23347366)
chr2 (79-128)||(24601662-24601711)
chr2 (79-128)||(24612403-24612452)
chr2 (91-128)||(25184831-25184868)
chr2 (91-128)||(26543990-26544027)
chr2 (91-128)||(28468676-28468713)
chr2 (91-128)||(40221131-40221168)
chr2 (91-128)||(41565353-41565390)
chr2 (91-128)||(43536137-43536174)
chr2 (91-128)||(43982234-43982271)
chr2 (19-126)||(17911135-17911243)
chr2 (91-127)||(28477069-28477105)
[»] scaffold0794 (1 HSPs)
scaffold0794 (91-128)||(5306-5343)
[»] scaffold0494 (3 HSPs)
scaffold0494 (87-128)||(862-903)
scaffold0494 (89-128)||(890-929)
scaffold0494 (91-128)||(5366-5403)
[»] scaffold0143 (1 HSPs)
scaffold0143 (19-64)||(3906-3951)
[»] scaffold0050 (1 HSPs)
scaffold0050 (152-199)||(67649-67696)
[»] scaffold0341 (1 HSPs)
scaffold0341 (78-128)||(18058-18108)
[»] scaffold0744 (1 HSPs)
scaffold0744 (91-128)||(424-461)
[»] scaffold0634 (1 HSPs)
scaffold0634 (91-128)||(7453-7490)
[»] scaffold0038 (1 HSPs)
scaffold0038 (91-128)||(50082-50119)


Alignment Details
Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 18438427 - 18438503
Alignment:
Q  130 gcaaattttggggagatgagatggacactgatgctactgatagcacattgggccctgaaactgactctgaagctcat 206  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  18438427 gcaaattttggggagatgagatggacactgatgcttctgatggcacattggaccctgaaactgactctgaagctcat 18438503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 18449285 - 18449361
Alignment:
Q  130 gcaaattttggggagatgagatggacactgatgctactgatagcacattgggccctgaaactgactctgaagctcat 206  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  18449285 gcaaattttggggagatgagatggacactgatgcttctgatggcacattggaccctgaaactgactctgaagctcat 18449361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 18454378 - 18454454
Alignment:
Q  130 gcaaattttggggagatgagatggacactgatgctactgatagcacattgggccctgaaactgactctgaagctcat 206  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  18454378 gcaaattttggggagatgagatggacactgatgcttctgatggcacattggaccctgaaactgactctgaagctcat 18454454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 5845599 - 5845503
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacctcg 114  Q
    |||| ||||||||||||||||||||||||||||  | ||||||||| |||||||| |||| ||||| | ||| ||||||||||||||||||||||||    
T  5845599 ggctaagaaacacatgtaaaagacgaaaatacctctcgatagttaactgccgaggaaaaataaaaccggctgcagttaactaccgaggaaaacctcg 5845503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 11828310 - 11828201
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    ||||||| |||||||| |||||||| |||||||| || ||||||||| ||||||| |||| | ||| || ||||||||||||||||| ||||| |||  |    
T  11828310 aggctgaaaaacacatataaaagacaaaaatacccttcgatagttaactgccgagaaaaatagaaccga-tgtagttaactaccgagaaaaacttcggca 11828212  T
Q  118 gttaactgccg 128  Q
    |||||||||||    
T  11828211 gttaactgccg 11828201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 41459322 - 41459215
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    ||||||||||||||||||||| || ||||||||  | || |||||| |||||||| |||| |||||   ||| ||||||||||||||||||||||||  |    
T  41459322 ggctgagaaacacatgtaaaataccaaaatacccctcgacagttaactgccgaggaaaaataaaaccagctgcagttaactaccgaggaaaacctcggca 41459223  T
Q  118 gttaactg 125  Q
    ||||||||    
T  41459222 gttaactg 41459215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 13147457 - 13147565
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaa--actgactgtagttaactaccgaggaaaacctcgat 116  Q
    |||||| ||||||| |||||||||| ||||| || | | ||||||| ||| |||||||| | |  || ||||| |||||||||||||||||||||||||     
T  13147457 ggctgaaaaacacaagtaaaagacggaaatatcactcggtagttaactgctgaggaaaaaatagaaccgactgcagttaactaccgaggaaaacctcgac 13147556  T
Q  117 agttaactg 125  Q
    |||||||||    
T  13147557 agttaactg 13147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 23603455 - 23603549
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacct 112  Q
    ||||||||||||||| |||||||||||||||||  |   ||||||| ||||| || |||| ||||| ||||| ||||||||| ||||||||||||    
T  23603455 ggctgagaaacacatataaaagacgaaaatacccctcagtagttaactgccggggaaaaataaaacagactgcagttaactatcgaggaaaacct 23603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 26606760 - 26606870
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaa-acaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    |||||||||||||  |||||| || ||||||||  | | || |||| ||||||||||| || |||||||||  |||||||||||||||||||| |||  |    
T  26606760 ggctgagaaacacgagtaaaataccaaaatacccctcggtaattaactgccgaggaaatacgaaactgactacagttaactaccgaggaaaacttcggca 26606859  T
Q  118 gttaactgccg 128  Q
    |||||||||||    
T  26606860 gttaactgccg 26606870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 36183858 - 36183916
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    ||||||||||||||||||||| ||||||||||| || | ||||||||| ||||||||||    
T  36183858 ggctgagaaacacatgtaaaaaacgaaaatacctttcggtagttaagtaccgaggaaaa 36183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 3941221 - 3941151
Alignment:
Q  59 agttaagtgccgaggaaaaca-aaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| ||||||||||  || |||||| ||| |||||||||||||||||||| ||| |||||||||||||    
T  3941221 agttaactgccgaggaattcataaactggctgcagttaactaccgaggaaaacttcggtagttaactgccg 3941151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 45943768 - 45943727
Alignment:
Q  87 ctgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  45943768 ctgtagttaactaccgaggaaaacttcggtagttaactgccg 45943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 50269215 - 50269122
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacc 111  Q
    |||||||||||||  |||||||| |||||||||  | | |||||||||| ||||| |||| ||||| ||||| |||||||| ||||| ||||||    
T  50269215 ggctgagaaacacgagtaaaagatgaaaatacccctcggtagttaagtgtcgaggaaaaagaaaaccgactgcagttaactgccgagaaaaacc 50269122  T

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Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 50513930 - 50513987
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaa 76  Q
    |||||| |||||||| |||||||||||||||||||| | ||||||| || ||||||||    
T  50513930 ggctgacaaacacatataaaagacgaaaataccattcggtagttaactggcgaggaaa 50513987  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 23604336 - 23604252
Alignment:
Q  26 aaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaa 109  Q
    |||||||||||||||||||||||||   |  |||||||| |||||||| |||| ||||| |  || |||||||||||||||||||    
T  23604336 aaacacatgtaaaagacgaaaatactcctcaatagttaactgccgaggaaaaataaaaccggttgcagttaactaccgaggaaaa 23604252  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 38878535 - 38878567
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaatacc 51  Q
    |||||||||||||||||||||||||||||||||    
T  38878535 ggctgagaaacacatgtaaaagacgaaaatacc 38878567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 13633902 - 13633941
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  13633902 gtagttaactgccgaggaaaacctcggtagttaactgccg 13633941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 16270137 - 16270026
Alignment:
Q  17 taggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgat 116  Q
    |||||||| ||||| | |||||| || |||||||| || ||| ||||| | |||||||||| | ||  | ||| |||||||| |||| ||||||||||      
T  16270137 taggctgaaaaacataagtaaaataccaaaatacccttcgatggttaactaccgaggaaaatagaaacggctgcagttaactgccgaagaaaacctcggc 16270038  T
Q  117 agttaactgccg 128  Q
    ||||||||||||    
T  16270037 agttaactgccg 16270026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 23276146 - 23276111
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgc 126  Q
    |||||||| |||||||||||||||||||||||||||    
T  23276146 agttaactgccgaggaaaacctcgatagttaactgc 23276111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 41804104 - 41804037
Alignment:
Q  59 agttaagtgccgaggaaaacaaaa-ctgactgtagttaactaccgaggaaaacctcgatagttaactg 125  Q
    |||||| ||||||||||  ||||| | ||||| |||||||| ||||||||||||||| ||||||||||    
T  41804104 agttaactgccgaggaattcaaaaaccgactgcagttaactgccgaggaaaacctcggtagttaactg 41804037  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 42572762 - 42572797
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgc 126  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42572762 agttaactaccgaggaaaacctcgacagttaactgc 42572797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 1167564 - 1167630
Alignment:
Q  59 agttaagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacctcgatagttaact 124  Q
    |||||| ||||||||||||  ||||| ||||| ||||||||| ||||||||||||||  ||||||||    
T  1167564 agttaactgccgaggaaaagtaaaaccgactgcagttaactatcgaggaaaacctcggcagttaact 1167630  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 3944009 - 3944055
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  3944009 agttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 3944055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 3993881 - 3993835
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  3993881 agttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 3993835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 6562918 - 6562868
Alignment:
Q  78 caaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| | ||| ||||||||||||| ||||||||||| ||||||||||||    
T  6562918 caaaaccggctgcagttaactaccgaagaaaacctcgacagttaactgccg 6562868  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 3728770 - 3728807
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  3728770 agttaactgccgaggaaaacctcggtagttaactgccg 3728807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 8548707 - 8548670
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  8548707 agttaactgccgaggaaaacctcggtagttaactgccg 8548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 13636160 - 13636123
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  13636160 agttaactgccgaggaaaacctcggtagttaactgccg 13636123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 15051386 - 15051349
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  15051386 agttaactgccgaggaaaacctcggtagttaactgccg 15051349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 22524161 - 22524198
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  22524161 agttaactcccgaggaaaacctcggtagttaactgccg 22524198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 23359387 - 23359350
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  23359387 agttaactaccgaggaaaacctcggtagtaaactgccg 23359350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 24364763 - 24364726
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  24364763 agttaactactgaggaaaacctcgacagttaactgccg 24364726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 26633562 - 26633599
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  26633562 agttaactgccgaggaaaacctcggtagttaactgccg 26633599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 29424415 - 29424452
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  29424415 agttaactaccgaggaaaacttcggtagttaactgccg 29424452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 29425374 - 29425337
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  29425374 agttaactaccgaggaaaacttcggtagttaactgccg 29425337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 29438058 - 29438021
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| || ||||||||||    
T  29438058 agttaactaccgaggaaaacctcggtaattaactgccg 29438021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 36072404 - 36072441
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  36072404 agttaactgccgaggaaaacctcggtagttaactgccg 36072441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 44336284 - 44336321
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  44336284 agttaactgccgaggaaaacctcggtagttaactgccg 44336321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 46217356 - 46217319
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  46217356 agttaactaccgaggaaaacttcggtagttaactgccg 46217319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 52802165 - 52802202
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  52802165 agttaactgccgaggaaaacctcggtagttaactgccg 52802202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 5844638 - 5844670
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaatacc 51  Q
    |||||||||||||||||||||| ||||||||||    
T  5844638 ggctgagaaacacatgtaaaagtcgaaaatacc 5844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 26879333 - 26879297
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgcc 127  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  26879333 agttaactgccgaggaaaacctcggtagttaactgcc 26879297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 9e-26; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 40039796 - 40039685
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaact-gactgtagttaactaccgaggaaaacctcgat 116  Q
    ||||||| ||||||||||||||||| |||||||| || ||||||||| || |||||||  | ||| | ||||| ||||||||||||||||||||||||||    
T  40039796 aggctgataaacacatgtaaaagacaaaaatacccttcgatagttaactgtcgaggaagtccaaaatcgactgcagttaactaccgaggaaaacctcgat 40039697  T
Q  117 agttaactgccg 128  Q
    ||||||||||||    
T  40039696 agttaactgccg 40039685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 40039087 - 40039198
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactga-ctgtagttaactaccgaggaaaacctcgat 116  Q
    ||||||| ||||||||||||||||||||||||||  |  |||||||| | ||||||||  | ||| | | ||| ||||||||||||||||||||||||      
T  40039087 aggctgaaaaacacatgtaaaagacgaaaatacccctcaatagttaattaccgaggaagtccaaaatcagctgcagttaactaccgaggaaaacctcgga 40039186  T
Q  117 agttaactgccg 128  Q
    ||||||||||||    
T  40039187 agttaactgccg 40039198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 5680527 - 5680469
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||| |||||||||    
T  5680527 ggctgagaaacacatgtaaaagacaaaaatacccttcgatagttaagtgtcgaggaaaa 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 26451511 - 26451552
Alignment:
Q  87 ctgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  26451511 ctgtagttaactgccgaggaaaacctcggtagttaactgccg 26451552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 32383243 - 32383206
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32383243 agttaactaccgaggaaaacctcggtagttaactgccg 32383206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 32437198 - 32437161
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32437198 agttaactaccgaggaaaacctcggtagttaactgccg 32437161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 33482725 - 33482770
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaa 64  Q
    ||||||||||||||||||||||||||||||||| || | |||||||    
T  33482725 ggctgagaaacacatgtaaaagacgaaaatacctttcggtagttaa 33482770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 27411633 - 27411665
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaatacc 51  Q
    |||||||||||||||||||||||||||||||||    
T  27411633 ggctgagaaacacatgtaaaagacgaaaatacc 27411665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 40077294 - 40077251
Alignment:
Q  85 gactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||    
T  40077294 gactgcagttaactgccgaggaaaacctcggtagttaactgccg 40077251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 8419439 - 8419485
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  8419439 agttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 8419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 21406269 - 21406339
Alignment:
Q  59 agttaagtgccgaggaaaaca-aaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| ||||||||||  || |||| | ||| |||||||||||||||||||| ||| |||||||||||||    
T  21406269 agttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccg 21406339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 21800761 - 21800831
Alignment:
Q  59 agttaagtgccgaggaaaaca-aaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| ||||||||||  || |||| | ||| |||||||||||||||||||| ||| |||||||||||||    
T  21800761 agttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccg 21800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 32375686 - 32375732
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  32375686 agttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 32375732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 41016444 - 41016486
Alignment:
Q  86 actgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||| |||||||| ||||||||||||||| |||||||||||||    
T  41016444 actgcagttaactgccgaggaaaacctcggtagttaactgccg 41016486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 184590 - 184553
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  184590 agttaactgccgaggaaaacctcggtagttaactgccg 184553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 22550903 - 22550866
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  22550903 agttaactgccgaggaaaacctcggtagttaactgccg 22550866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 26663071 - 26663034
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  26663071 agttaactgccgaggaaaacctcggtagttaactgccg 26663034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 34366946 - 34366983
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  34366946 agttaacttccgaggaaaacctcggtagttaactgccg 34366983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 42602495 - 42602532
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  42602495 agttaactgccgaggaaaacctcggtagttaactgccg 42602532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 49
Target Start/End: Original strand, 21175745 - 21175773
Alignment:
Q  21 ctgagaaacacatgtaaaagacgaaaata 49  Q
    |||||||||||||||||||||||||||||    
T  21175745 ctgagaaacacatgtaaaagacgaaaata 21175773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 36677967 - 36677931
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgcc 127  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  36677967 agttaactgccgaggaaaacctcggtagttaactgcc 36677931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 38134405 - 38134437
Alignment:
Q  96 actaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||| |||||||||||||||||    
T  38134405 actaccgaggaaaacttcgatagttaactgccg 38134437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 20354040 - 20353931
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgatag 118  Q
    ||||||||||||||||||||||||||||||| | ||   ||||||||||| |||||||||||||   |||| ||||||||| |||||||||||||  |||    
T  20354040 ggctgagaaacacatgtaaaagacgaaaatatccttccgtagttaagtgctgaggaaaacaaaatcaactgcagttaactatcgaggaaaacctcagtag 20353941  T
Q  119 ttaactgccg 128  Q
    ||||||||||    
T  20353940 ttaactgccg 20353931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 30791046 - 30791000
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||    
T  30791046 agttaactaccgaggaaaacctcggtagttaactgccgaggaaattt 30791000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 17838689 - 17838722
Alignment:
Q  95 aactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||||||||||||||||||    
T  17838689 aactaccgaggaaaacctcgatagttaactgccg 17838722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 20353330 - 20353395
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaac 83  Q
    |||||||||||||| ||||||||||||||||||  ||   || |||||||||||| ||||||||||    
T  20353330 aggctgagaaacacttgtaaaagacgaaaatactcttcagtaattaagtgccgagaaaaacaaaac 20353395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 47060957 - 47060998
Alignment:
Q  87 ctgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  47060957 ctgtagttaactgccgaggaaaacctcggtagttaactgccg 47060998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 31324855 - 31324811
Alignment:
Q  80 aaactgactgtagttaactaccgaggaaaacctcgatagttaact 124  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||    
T  31324855 aaaccgactgtagttaactaccgaggaaaacctcggcagttaact 31324811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 17840934 - 17840891
Alignment:
Q  85 gactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||    
T  17840934 gactgcagttaactgccgaggaaaacctcggtagttaactgccg 17840891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 36805500 - 36805595
Alignment:
Q  20 gctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgag-gaaaacaaaactgactgtagttaactaccgaggaaaacctcg 114  Q
    ||||||||||| |||||||||||||||||| |  ||||||||||| || ||||  |||| ||||| |  || ||||| ||||||||||||| ||||    
T  36805500 gctgagaaacatatgtaaaagacgaaaatatcccttgatagttaactgtcgagaaaaaataaaaccgcttgcagttagctaccgaggaaaatctcg 36805595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 42499438 - 42499481
Alignment:
Q  85 gactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||    
T  42499438 gactgcagttaactgccgaggaaaacctcggtagttaactgccg 42499481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 45767899 - 45767853
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  45767899 agttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 45767853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 8522185 - 8522140
Alignment:
Q  80 aaactgactgtagttaactaccgaggaaaacctcgatagttaactg 125  Q
    |||||| |||||||||||| |||||||||||||||  |||||||||    
T  8522185 aaactggctgtagttaactcccgaggaaaacctcggcagttaactg 8522140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 9367762 - 9367725
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  9367762 agttaactgccgaggaaaacctcggtagttaactgccg 9367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 15070390 - 15070427
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  15070390 agttaactgccgaggaaaacctcggtagttaactgccg 15070427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 18105408 - 18105445
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  18105408 agttaactgccgaggaaaacctcggtagttaactgccg 18105445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 30355277 - 30355240
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  30355277 agttaactgccgaggaaaacctcggtagttaactgccg 30355240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 35606824 - 35606861
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  35606824 agttaactgccgaggaaaacctcggtagttaactgccg 35606861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 7953868 - 7953836
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaatacc 51  Q
    |||||| ||||||||||||||||||||||||||    
T  7953868 ggctgataaacacatgtaaaagacgaaaatacc 7953836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 36781498 - 36781450
Alignment:
Q  80 aaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||| ||||| |||||||| |||||||||||||||  ||||||||||||    
T  36781498 aaacagactgcagttaactcccgaggaaaacctcggcagttaactgccg 36781450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 41047809 - 41047849
Alignment:
Q  88 tgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||| ||||||||||| ||| |||||||||||||    
T  41047809 tgtagttaactgccgaggaaaacttcggtagttaactgccg 41047849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 27532725 - 27532618
Alignment:
Q  22 tgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacctcgatagtt 120  Q
    |||||||||||||||||| || ||||||||  | || |||||| ||||||||||||  ||||||||||| ||||||||| ||||||||||||||  ||||    
T  27532725 tgagaaacacatgtaaaataccaaaatacccctcgacagttaactgccgaggaaaaataaaactgactgcagttaactatcgaggaaaacctcggcagtt 27532626  T
Q  121 aactgccg 128  Q
    ||||||||    
T  27532625 aactgccg 27532618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 30966053 - 30966144
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccattt-gatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaac 110  Q
    |||||||||||||| ||||||||| |||||||| ||| | ||||||| |||||||||||| | ||| | |||||||||||| |||||||||||    
T  30966053 ggctgagaaacaca-gtaaaagaccaaaataccctttcggtagttaactgccgaggaaaatataaccggctgtagttaactcccgaggaaaac 30966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 31609846 - 31609895
Alignment:
Q  131 caaattttggggagatgagatggacactgatgctactgatagcacattgg 180  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||||    
T  31609846 caaattttgagaagatgagatgaacactgatgctactgatagcacattgg 31609895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 18307285 - 18307326
Alignment:
Q  87 ctgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  18307285 ctgtagttaactgccgaggaaaacctcggtagttaactgccg 18307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 38968130 - 38968167
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| |||||||||||||||||||||||||||||    
T  38968130 agttaactgccgaggaaaacctcgatagttaactgccg 38968167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 35926397 - 35926433
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgcc 127  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35926397 agttaactaccgaggaaaacctcggtagttaactgcc 35926433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 3603196 - 3603149
Alignment:
Q  81 aactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| ||| |||||||| ||||||||||||||| |||||||||||||    
T  3603196 aactggctgcagttaacttccgaggaaaacctcggtagttaactgccg 3603149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 25890023 - 25890066
Alignment:
Q  85 gactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| |||||||||||||||||||||||| |||| ||||||||    
T  25890023 gactgcagttaactaccgaggaaaacctcggtagtaaactgccg 25890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 42099137 - 42099087
Alignment:
Q  74 aaaacaaaactgactgtagttaactaccgaggaaaacctcgatagttaact 124  Q
    |||| ||||||| ||||||||||||| ||||||||||||||  ||||||||    
T  42099137 aaaataaaactggctgtagttaactatcgaggaaaacctcggcagttaact 42099087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 1035219 - 1035256
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  1035219 agttaattaccgaggaaatcctcgatagttaactgccg 1035256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 7757360 - 7757397
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  7757360 agttaactgccgaggaaaacctcgctagttaactgccg 7757397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 13837759 - 13837796
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  13837759 agttaactgccgaggaaaacctcggtagttaactgccg 13837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 13838462 - 13838425
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  13838462 agttaactaccgaggaaaacctcggcagttaactgccg 13838425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 17966930 - 17966889
Alignment:
Q  85 gactgtagttaactaccgaggaaaacctcgatagttaactgc 126  Q
    ||||| ||||||||||||||||||| |||| |||||||||||    
T  17966930 gactgcagttaactaccgaggaaaatctcggtagttaactgc 17966889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 19037508 - 19037471
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  19037508 agttaactgccgaggaaaacctcggtagttaactgccg 19037471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 28238174 - 28238211
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  28238174 agttaactgccgaggaaaacctcggtagttaactgccg 28238211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 28388557 - 28388520
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  28388557 agttaactgccgaggaaaacctcggtagttaactgccg 28388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 30708911 - 30708874
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  30708911 agttaactgccgaagaaaacctcgatagttaactgccg 30708874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 27659976 - 27660012
Alignment:
Q  92 gttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  27659976 gttaactgccgaggaaaacctcggtagttaactgccg 27660012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 30705207 - 30705167
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgccgc 129  Q
    |||||||||| ||||||||| ||||| ||||||||||||||    
T  30705207 gtagttaactgccgaggaaatcctcggtagttaactgccgc 30705167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 38855749 - 38855713
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgcc 127  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  38855749 agttaactgccgaggaaaacctcggtagttaactgcc 38855713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 42098305 - 42098361
Alignment:
Q  59 agttaagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacctcg 114  Q
    |||||| ||||||||||||  ||||||| ||| |||||||| |||||||||||||||    
T  42098305 agttaactgccgaggaaaaataaaactggctgcagttaactgccgaggaaaacctcg 42098361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 26791609 - 26791721
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa--caaaactgactgtagttaactaccgaggaaaacctcga 115  Q
    |||||||||||||||||||||||||||||||||| || | ||||||| |||||| |||||    |||| | ||| |||||||||||||| |||||||||     
T  26791609 aggctgagaaacacatgtaaaagacgaaaatacccttcggtagttaactgccgaagaaaaagggaaaccggctgcagttaactaccgagaaaaacctcgg 26791708  T
Q  116 tagttaactgccg 128  Q
     ||||||||||||    
T  26791709 cagttaactgccg 26791721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 40335247 - 40335155
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaac 110  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||| ||| |||| |||| ||||| | |||||||||||| |||||||||||    
T  40335247 ggctgagaaacacatgtaaaagacgaaaatacccttcaatagttaactgctgaggaaaaataaaaccggctgtagttaactgccgaggaaaac 40335155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 41933733 - 41933623
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    |||||||||||||  |||||| |||| ||||||  | |||||||||||||||||| ||||  |||| | ||| |||||||||||||| ||||||||| ||    
T  41933733 ggctgagaaacacgagtaaaaaacgacaatacccctcgatagttaagtgccgaggaaaaatgaaaccggctgcagttaactaccgagaaaaacctcggta 41933634  T
Q  118 gttaactgccg 128  Q
    |||||||||||    
T  41933633 gttaactgccg 41933623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 48578264 - 48578172
Alignment:
Q  22 tgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgag-gaaaacaaaactgactgtagttaactaccgaggaaaacctc 113  Q
    ||||||||||||||||||||||||||||||  | | |||||||||||||||  |||| ||||| | ||| ||||||||||||| |||||||||    
T  48578264 tgagaaacacatgtaaaagacgaaaatacctctcggtagttaagtgccgagaaaaaataaaaccggctgcagttaactaccgaagaaaacctc 48578172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 35075927 - 35076018
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccg-aggaaaacaaaactgactgtagttaactaccgaggaaaa 109  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||| || || |||| |||||   ||| |||||||||||||||||||    
T  35075927 ggctgagaaacacatgtaaaagacgaaaatacccctcgatagttaagtgtcgaagaaaaataaaaccagctgcagttaactaccgaggaaaa 35076018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 14297106 - 14297202
Alignment:
Q  17 taggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctc 113  Q
    |||||| ||||||||| |||||||||| |||| |   | | ||||||||||||||| ||||  |||||| ||| |||||||||||||||||||||||    
T  14297106 taggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaagtgccgagaaaaatgaaactggctgcagttaactaccgaggaaaacctc 14297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 14315355 - 14315451
Alignment:
Q  17 taggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctc 113  Q
    |||||| ||||||||| |||||||||| |||| |   | | ||||||||||||||| ||||  |||||| ||| |||||||||||||||||||||||    
T  14315355 taggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaagtgccgagaaaaatgaaactggctgcagttaactaccgaggaaaacctc 14315451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 11084111 - 11084008
Alignment:
Q  26 aaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactg-actgtagttaactaccgaggaaaacctcgatagttaact 124  Q
    |||||||| |||||||||||||||||  | | ||| ||||||||||||||||  ||| |  || | |||||||| |||||||||||||||  ||||||||    
T  11084111 aaacacatttaaaagacgaaaatacccctcggtaggtaagtgccgaggaaaaataaaatccacggcagttaactcccgaggaaaacctcggcagttaact 11084012  T
Q  125 gccg 128  Q
    ||||    
T  11084011 gccg 11084008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 72618 - 72529
Alignment:
Q  17 taggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaa-acaaaactgactgtagttaactaccgagg 105  Q
    |||||||||||||||  |||||| || ||||||||||| | ||||||| ||||||||||| |  |||| | ||| |||||||||||||||    
T  72618 taggctgagaaacacgagtaaaataccaaaataccattcggtagttaactgccgaggaaatatgaaaccgtctgcagttaactaccgagg 72529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 16984199 - 16984162
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16984199 agttaactgccgaggaaaacctcgatagttaactgccg 16984162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 31242863 - 31242830
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaatacc 51  Q
    ||||||||||||||||||||||||||||||||||    
T  31242863 aggctgagaaacacatgtaaaagacgaaaatacc 31242830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 9013874 - 9013909
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgc 126  Q
    |||||||| |||||||||||||||||||||||||||    
T  9013874 agttaactgccgaggaaaacctcgatagttaactgc 9013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 11494556 - 11494615
Alignment:
Q  69 cgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||  |||||| | ||| |||||||| ||||||||||||||| |||||||||||||    
T  11494556 cgaggaattcaaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccg 11494615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 26932617 - 26932656
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  26932617 gtagttaactgccgaggaaaacctcggtagttaactgccg 26932656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 36003608 - 36003666
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    |||||| |||||||||||||||||||||||||   | |||||||||||| |||| ||||    
T  36003608 ggctgaaaaacacatgtaaaagacgaaaatactcctcgatagttaagtgtcgagaaaaa 36003666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 49422205 - 49422171
Alignment:
Q  92 gttaactaccgaggaaaacctcgatagttaactgc 126  Q
    |||||||||||||||||||||||| ||||||||||    
T  49422205 gttaactaccgaggaaaacctcgacagttaactgc 49422171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 958632 - 958595
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  958632 agttaactgccgaggaaaacctcggtagttaactgccg 958595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 6178148 - 6178111
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  6178148 agttaactgccgaggaaaacctcggtagttaactgccg 6178111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 9890029 - 9890066
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  9890029 agttaactgccgaggaaaacctcggtagttaactgccg 9890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 15995757 - 15995794
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  15995757 agttaactgccgaggaaaacctcggtagttaactgccg 15995794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 19069222 - 19069259
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  19069222 agttaactgccgaggaaaacctcggtagttaactgccg 19069259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 21022926 - 21022889
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  21022926 agttaactgccgaggaaaacctcggtagttaactgccg 21022889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 21470926 - 21470975
Alignment:
Q  79 aaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||| |||||||  | ||||||||||||| |||||||||||||    
T  21470926 aaaactgactgcagttaaccgcagaggaaaacctcggtagttaactgccg 21470975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 30726779 - 30726742
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  30726779 agttaactgccgaggaaaacctcggtagttaactgccg 30726742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 31425356 - 31425319
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  31425356 agttaactgccgaggaaaacctcggtagttaactgccg 31425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 33383828 - 33383877
Alignment:
Q  79 aaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| ||||| |||||||| |||||||||||||||  ||||||||||||    
T  33383828 aaaaccgactgcagttaactgccgaggaaaacctcggaagttaactgccg 33383877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 37022099 - 37022062
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  37022099 agttaactaccgaggaaaacctcggcagttaactgccg 37022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 37563318 - 37563281
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  37563318 agttaactgccgaggaaaacctcggtagttaactgccg 37563281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 39590606 - 39590569
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  39590606 agttaactgccgaggaaaacctcggtagttaactgccg 39590569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 39773439 - 39773476
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  39773439 agttaactgccgaggaaaacctcggtagttaactgccg 39773476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 40358318 - 40358281
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  40358318 agttaactgccgaggaaaacctcggtagttaactgccg 40358281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 41795394 - 41795357
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  41795394 agttaactgccgaggaaaacctcgttagttaactgccg 41795357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 44561368 - 44561331
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  44561368 agttaactaccgaggaaaatctcggtagttaactgccg 44561331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 49094119 - 49094156
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  49094119 agttaactgccgaggaaaacctcggtagttaactgccg 49094156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 54634053 - 54634016
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  54634053 agttaactgccgaggaaaacctcggtagttaactgccg 54634016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 30836652 - 30836716
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccattt-gatagttaagtgccgaggaaaacaaaa 82  Q
    |||||| |||||||||||||||||||||||  ||||| || |||||| |||||| ||||| ||||    
T  30836652 ggctgaaaaacacatgtaaaagacgaaaatgtcatttcgacagttaactgccgacgaaaaaaaaa 30836716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 128
Target Start/End: Complemental strand, 31242818 - 31242786
Alignment:
Q  96 actaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||| |||||||||||||    
T  31242818 actaccgaggaaaacctcggtagttaactgccg 31242786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 31496196 - 31496302
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    |||||||||||||||||||||||| |||||||| || | ||||||| || ||||| |||| ||||| | ||| ||||| ||||||||||||||||||  |    
T  31496196 ggctgagaaacacatgtaaaagacaaaaatacccttcggtagttaactgtcgaggaaaaataaaaccggctgcagttatctaccgaggaaaacctcggca 31496295  T
Q  118 gttaact 124  Q
    |||||||    
T  31496296 gttaact 31496302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 31501582 - 31501688
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa-caaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    |||||||||||||||||||||||| |||||||| || | ||||||| || |||||||||  ||||| | ||| ||||| ||||||||||||||||||  |    
T  31501582 ggctgagaaacacatgtaaaagacaaaaatacccttcggtagttaactgtcgaggaaaattaaaaccggctgcagttatctaccgaggaaaacctcggca 31501681  T
Q  118 gttaact 124  Q
    |||||||    
T  31501682 gttaact 31501688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 32555693 - 32555593
Alignment:
Q  24 agaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgatagttaac 123  Q
    |||||||| ||||||||| |||||||    | | ||||||||||  |||||||||||||| |||||||||||| |||  |||||||||||| ||||||||    
T  32555693 agaaacacttgtaaaagaagaaaatattcctcggtagttaagtgttgaggaaaacaaaaccgactgtagttaattactaaggaaaacctcggtagttaac 32555594  T
Q  124 t 124  Q
    |    
T  32555593 t 32555593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 3380775 - 3380838
Alignment:
Q  62 taagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacctcgatagttaact 124  Q
    ||||||||||||||||  |||| |||| | ||||||||||||||||||||||||| ||||||||    
T  3380775 taagtgccgaggaaaaataaaattgacggcagttaactaccgaggaaaacctcgacagttaact 3380838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 32555064 - 32555118
Alignment:
Q  22 tgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaa 76  Q
    |||||||||||||||||||||||||||| |||| | ||||||| |||||| ||||    
T  32555064 tgagaaacacatgtaaaagacgaaaatatcattcggtagttaactgccgatgaaa 32555118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 33052499 - 33052605
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgatag 118  Q
    ||||||||||||||||||||| ||||||||     | |  |||||| || ||||||||| ||||| | ||| |||||||||||||| |||| ||||| ||    
T  33052499 ggctgagaaacacatgtaaaaaacgaaaatgtttctcggcagttaactgtcgaggaaaataaaaccgtctgcagttaactaccgagaaaaatctcgacag 33052598  T
Q  119 ttaactg 125  Q
    |||||||    
T  33052599 ttaactg 33052605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 28362769 - 28362734
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgc 126  Q
    |||||||| |||||||||||||||||||||||||||    
T  28362769 agttaactgccgaggaaaacctcgatagttaactgc 28362734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 31480328 - 31480430
Alignment:
Q  23 gagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacctcgatagtta 121  Q
    |||||||||||||||||| | |||||||| || | ||||||| || ||||| |||| |||||   ||| ||||| ||||| ||||||||||||  |||||    
T  31480328 gagaaacacatgtaaaagtcaaaaatacccttcggtagttaactgtcgaggaaaaataaaaccagctgcagttatctacccaggaaaacctcgggagtta 31480427  T
Q  122 act 124  Q
    |||    
T  31480428 act 31480430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 31517001 - 31516943
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    |||| |||||||||||||||||| |||||||||  | | ||||||| ||||||||||||    
T  31517001 ggctaagaaacacatgtaaaagatgaaaatacccctcggtagttaactgccgaggaaaa 31516943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 6204862 - 6204899
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  6204862 agttaactgccgaggaaaacctcggtagttaactgccg 6204899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 9048110 - 9048147
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  9048110 agttaactaccgaggaaaacttcggtagttaactgccg 9048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 9049122 - 9049085
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  9049122 agttaactaccgaggaaaacttcggtagttaactgccg 9049085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 11691829 - 11691866
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  11691829 agttaactgccgaggaaaacctcggtagttaactgccg 11691866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 13382664 - 13382701
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  13382664 agttaactgccgaggaaaacctcggtagttaactgccg 13382701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 18351681 - 18351644
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  18351681 agttaactgccgaggaaaacctcggtagttaactgccg 18351644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 22305143 - 22305180
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  22305143 agttaactgccgaggaaaacctcggtagttaactgccg 22305180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 26712083 - 26712120
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  26712083 agttaactgccgaggaaaacctcggtagttaactgccg 26712120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 28249920 - 28249957
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  28249920 agttaactgccgaggaaaacctcggtagttaactgccg 28249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 45507508 - 45507402
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    ||||||||||||||| ||||||||||||||| |  | ||||||||| |||||||| |||| ||||  | ||| ||||||||||||||||||||||||  |    
T  45507508 ggctgagaaacacatataaaagacgaaaatatccctcgatagttaactgccgaggaaaaataaaatcggctgcagttaactaccgaggaaaacctcggca 45507409  T
Q  118 gttaact 124  Q
    |||||||    
T  45507408 gttaact 45507402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 45506605 - 45506663
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||    
T  45506605 ggctgagaaacacatgtaaaagacaaaaatacctcttgatagttaactgccgaggaaaa 45506663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 2831100 - 2830990
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    |||||||||||| |||||||||||||||||| |  |  ||| |||| |||||| |||||  ||||| ||||  |||||||||| ||| |||||||||| |    
T  2831100 ggctgagaaacatatgtaaaagacgaaaatatccctcaataattaactgccgatgaaaaataaaaccgactacagttaactactgagaaaaacctcgaca 2831001  T
Q  118 gttaactgccg 128  Q
    |||||||||||    
T  2831000 gttaactgccg 2830990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 31890345 - 31890243
Alignment:
Q  26 aaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactgactgtagttaactaccgaggaaaacctcgatagttaactg 125  Q
    |||||||| ||||||||||||||| || ||| ||||||| |||||| ||||| | ||| | ||| |||||  ||| ||||||||| |||  |||||||||    
T  31890345 aaacacatataaaagacgaaaatatcacttggtagttaactgccgatgaaaaaagaaccggctgcagttagttacagaggaaaacttcggcagttaactg 31890246  T
Q  126 ccg 128  Q
    |||    
T  31890245 ccg 31890243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 42760251 - 42760209
Alignment:
Q  87 ctgtagttaactaccgaggaaaacctcgatagttaactgccgc 129  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  42760251 ctgtagttaactgccgaggaaaacctcggtagttaactgccgc 42760209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Complemental strand, 30256075 - 30256006
Alignment:
Q  58 tagttaagtgccgaggaaa-acaaaactgactgtagttaactaccgaggaaaacctcgatagttaactgc 126  Q
    ||||||| ||||||||||  | ||||| | ||| |||||||| |||||||||||||||||||||||||||    
T  30256075 tagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgatagttaactgc 30256006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 52570616 - 52570567
Alignment:
Q  79 aaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||| ||||| |||||||||||||| ||||||||| |||||||||||||    
T  52570616 aaaaccgactgcagttaactaccgagaaaaacctcggtagttaactgccg 52570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 51325944 - 51326048
Alignment:
Q  21 ctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacctcgatagt 119  Q
    |||||||| |||||||||||| ||||||| |  |  |||||||| || |||||||||  ||||| | ||| ||||||||||| || |||||||||| |||    
T  51325944 ctgagaaagacatgtaaaagatgaaaatatccctcaatagttaactgtcgaggaaaaataaaaccggctgcagttaactaccaagaaaaacctcgacagt 51326043  T
Q  120 taact 124  Q
    |||||    
T  51326044 taact 51326048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 29929463 - 29929498
Alignment:
Q  93 ttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| |||||||||||||||||||||||||||||    
T  29929463 ttaactgccgaggaaaacctcgatagttaactgccg 29929498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 29978617 - 29978652
Alignment:
Q  93 ttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| |||||||||||||||||||||||||||||    
T  29978617 ttaactgccgaggaaaacctcgatagttaactgccg 29978652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 48566375 - 48566414
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  48566375 gtagttaactaccgaggaaaacttcggtagttaactgccg 48566414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 16861224 - 16861190
Alignment:
Q  90 tagttaactaccgaggaaaacctcgatagttaact 124  Q
    ||||||||||||||||||| |||||||||||||||    
T  16861224 tagttaactaccgaggaaatcctcgatagttaact 16861190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 30943224 - 30943270
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  30943224 agttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 30943270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 38992365 - 38992407
Alignment:
Q  152 ggacactgatgctactgatagcacattgggccctgaaactgac 194  Q
    |||||||||||||||||||||||||||||  ||||| ||||||    
T  38992365 ggacactgatgctactgatagcacattggaacctgatactgac 38992407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 125
Target Start/End: Complemental strand, 49196487 - 49196453
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactg 125  Q
    ||||||||||||||||||||| |||||||||||||    
T  49196487 agttaactaccgaggaaaaccgcgatagttaactg 49196453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 50604531 - 50604421
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaacaaaactga-ctgtagttaactaccgaggaaaacctcgata 117  Q
    |||||| |||||||||||||| || |||||||| ||    |||||| ||| ||||||  | ||| | | ||| ||||||||||||||||||||||||  |    
T  50604531 ggctgaaaaacacatgtaaaatactaaaatacccttcagcagttaattgctgaggaagtccaaaatcagctgcagttaactaccgaggaaaacctcggca 50604432  T
Q  118 gttaactgccg 128  Q
    |||||||||||    
T  50604431 gttaactgccg 50604421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 2647737 - 2647700
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  2647737 agttaactgccgaggaaaacctcggtagttaactgccg 2647700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 9429887 - 9429850
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  9429887 agttaagtaccgaggaaaacctcggtagttaactgccg 9429850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 19341079 - 19341116
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  19341079 agttaactaccgaggaaaacttcgacagttaactgccg 19341116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 19440291 - 19440328
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  19440291 agttaactgccgaggaaaacctcggtagttaactgccg 19440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 20918049 - 20918012
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  20918049 agttaactgccgaggaaaacctcggtagttaactgccg 20918012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 20927011 - 20926974
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  20927011 agttaactgccgaggaaaacctcggtagttaactgccg 20926974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 29918379 - 29918342
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  29918379 agttaactgccgaggaaaacctcgttagttaactgccg 29918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 29967532 - 29967495
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  29967532 agttaactgccgaggaaaacctcgttagttaactgccg 29967495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 32593150 - 32593113
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  32593150 agttaacttccgaggaaaacttcgatagttaactgccg 32593113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 34049115 - 34049152
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  34049115 agttaactgccgaggaaaacctcggtagttaactgccg 34049152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 35743620 - 35743583
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  35743620 agttaactgccgaggaaaacctcggtagttaactgccg 35743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 36812872 - 36812909
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  36812872 agttaactaccgaggaaaacctcggtagtaaactgccg 36812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 41579762 - 41579725
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  41579762 agttaactgccgaggaaaacctcggtagttaactgccg 41579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 41803033 - 41803070
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  41803033 agttaactgccgaggaaaacctcggtagttaactgccg 41803070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 41844402 - 41844365
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  41844402 agttaactgccgaggaaaacctcggtagttaactgccg 41844365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 42756194 - 42756231
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  42756194 agttaactgccgaggaaaacctcgagagttaactgccg 42756231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 43476227 - 43476264
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  43476227 agttaactgccgaggaaaacctcggtagttaactgccg 43476264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 44227147 - 44227184
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  44227147 agttaactgccgaggaaaacctcggtagttaactgccg 44227184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 46697746 - 46697783
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  46697746 agttaactgccgaggaaaacctcggtagttaactgccg 46697783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 48566401 - 48566438
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgc 126  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  48566401 gtagttaactgccgaggaaaacctcggtagttaactgc 48566438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 50477215 - 50477252
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  50477215 agttaactgccgaggaaaacctcggtagttaactgccg 50477252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 51326755 - 51326726
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaat 48  Q
    ||||||||||||||||||||||||||||||    
T  51326755 ggctgagaaacacatgtaaaagacgaaaat 51326726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 54389830 - 54389867
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  54389830 agttaactgccgaggaaaacctcggtagttaactgccg 54389867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 1294126 - 1294078
Alignment:
Q  80 aaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||| ||||| |||||||| |||||||||||||||  ||||||||||||    
T  1294126 aaaccgactgcagttaacttccgaggaaaacctcggcagttaactgccg 1294078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 3501933 - 3501897
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgcc 127  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  3501933 agttaactgccgaggaaaacctcggtagttaactgcc 3501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 16861198 - 16861162
Alignment:
Q  90 tagttaactaccgaggaaaacctcgatagttaactgc 126  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  16861198 tagttaactaccgaggaaatcctcggtagttaactgc 16861162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 40872040 - 40872068
Alignment:
Q  23 gagaaacacatgtaaaagacgaaaatacc 51  Q
    |||||||||||||||||||||||||||||    
T  40872040 gagaaacacatgtaaaagacgaaaatacc 40872068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 51402439 - 51402399
Alignment:
Q  88 tgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||  |||||||||||||| |||||||||||||    
T  51402439 tgtagttaactgtcgaggaaaacctcggtagttaactgccg 51402399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 40055338 - 40055433
Alignment:
Q  18 aggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaac-aaaactgactgtagttaactaccgaggaaaacct 112  Q
    ||||||| ||||||||||||||||||||| ||||  | || |||||| |  |||||||||| ||||| | ||| ||||||||||||||||||||||    
T  40055338 aggctgataaacacatgtaaaagacgaaattacccctcgacagttaactatcgaggaaaactaaaaccggctgcagttaactaccgaggaaaacct 40055433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 31320110 - 31320160
Alignment:
Q  159 gatgctactgatagcacattgggccctgaaactgactctgaagctcataac 209  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||||||||    
T  31320110 gatgctactgatagcatattggaccctgaaactgacttcgaagctcataac 31320160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 37893481 - 37893423
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    |||| |||||||||||||||||| |||||||||| | | ||||||| ||||||||||||    
T  37893481 ggctaagaaacacatgtaaaagatgaaaataccactcggtagttaactgccgaggaaaa 37893423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 41183262 - 41183225
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41183262 agttaactaccgaggaaaacctcggtagttaactgccg 41183225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 5351772 - 5351724
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgccgcgcaaattt 137  Q
    |||||||||| ||||||||||||||| ||||||||||||| | ||||||    
T  5351772 gtagttaactgccgaggaaaacctcggtagttaactgccgaggaaattt 5351724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 19848228 - 19848140
Alignment:
Q  22 tgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgagg-aaaacaaaactgactgtagttaactaccgaggaaaa 109  Q
    ||||||||||||||||||||| ||||||   || ||||||||| |||||||| |||| ||||| |  || |||||||||||||| ||||    
T  19848228 tgagaaacacatgtaaaagacaaaaatattcttcgatagttaactgccgaggaaaaataaaaccggttgcagttaactaccgagaaaaa 19848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 25515920 - 25515813
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa--caaaactgactgtagttaactaccgaggaaaacctcgat 116  Q
    ||||||||||||   ||||||||||| ||||||  | | |||||||||| | |||||||  || ||| ||||| ||||||||||||||||| || ||| |    
T  25515920 ggctgagaaacatgagtaaaagacgacaatacccctcggtagttaagtgacaaggaaaaaacagaaccgactgcagttaactaccgaggaagacttcggt 25515821  T
Q  117 agttaact 124  Q
    ||||||||    
T  25515820 agttaact 25515813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 2983435 - 2983474
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccgcg 130  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  2983435 agttaactaccgaggaaaacctcggcagttaactgccgcg 2983474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 37893148 - 37893206
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaaaa 77  Q
    |||| ||||||||||||||| ||||||||||||  | | ||||||| ||||||||||||    
T  37893148 ggctaagaaacacatgtaaatgacgaaaatacccctcggtagttaactgccgaggaaaa 37893206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 435381 - 435414
Alignment:
Q  95 aactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||||| |||||||    
T  435381 aactaccgaggaaaacctcgatagttgactgccg 435414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 7780445 - 7780416
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaat 48  Q
    ||||||||||||||||||||||||||||||    
T  7780445 ggctgagaaacacatgtaaaagacgaaaat 7780416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 12908467 - 12908430
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  12908467 agttaactgccgaggaaaaccttgatagttaactgccg 12908430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 17424167 - 17424204
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  17424167 agttaactgccgaggaaaacctcggtagttaactgccg 17424204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 22003439 - 22003402
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  22003439 agttaactgccgaggaaaacctcggtagttaactgccg 22003402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 23347366 - 23347329
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  23347366 agttaactaccgaggaaaacctcggtagctaactgccg 23347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 24601662 - 24601711
Alignment:
Q  79 aaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||| ||| |||||||||||||||||| | ||| |||||||||||||    
T  24601662 aaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccg 24601711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 24612452 - 24612403
Alignment:
Q  79 aaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||| ||| |||||||||||||||||| | ||| |||||||||||||    
T  24612452 aaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccg 24612403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 25184868 - 25184831
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  25184868 agttaactgccgaggaaaacctcggtagttaactgccg 25184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 26544027 - 26543990
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  26544027 agttaactactgaggaaaacctcggtagttaactgccg 26543990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 28468676 - 28468713
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  28468676 agttaactgccgaggaaaacctcggtagttaactgccg 28468713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 40221168 - 40221131
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  40221168 agttaactaccgaggaaaacctcggcagttaactgccg 40221131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 41565353 - 41565390
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  41565353 agttaactaccgaggaaaacctcggcagttaactgccg 41565390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 43536137 - 43536174
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  43536137 agttaactgccgaggaaaacctcggtagttaactgccg 43536174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 43982234 - 43982271
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  43982234 agttaactgccgaggaaaacctcggtagttaactgccg 43982271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 17911135 - 17911243
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaagtgccgaggaa-aacaaaactgactgtagttaactaccgaggaaaacctcgata 117  Q
    |||||| |||||||||||||| || |||||  | || || |||||| ||||||||||   |||||| | ||| |||||| ||||||||||||||||   |    
T  17911135 ggctgaaaaacacatgtaaaatactaaaatgtccttcgacagttaactgccgaggaagtccaaaaccggctgcagttaattaccgaggaaaacctcagca 17911234  T
Q  118 gttaactgc 126  Q
    |||||||||    
T  17911235 gttaactgc 17911243  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 28477105 - 28477069
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgcc 127  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  28477105 agttaactgccgaggaaaacctcggtagttaactgcc 28477069  T

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Target: scaffold0794 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 5306 - 5343
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||||||||||||||| |||||||||||||    
T  5306 agttaactaccgaggaaaacctcggtagttaactgccg 5343  T

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Target: scaffold0494 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 862 - 903
Alignment:
Q  87 ctgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  862 ctgtagttaactgccgaggaaaacctcggtagttaactgccg 903  T

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Target: scaffold0494; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 890 - 929
Alignment:
Q  89 gtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  890 gtagttaactgccgaggaaaacctcggtagttaactgccg 929  T

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Target: scaffold0494; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 5366 - 5403
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  5366 agttaactgccgaggaaaacctcggtagttaactgccg 5403  T

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Target: scaffold0143 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 3951 - 3906
Alignment:
Q  19 ggctgagaaacacatgtaaaagacgaaaataccatttgatagttaa 64  Q
    ||||||||||||||||||||||||||||||||| || | |||||||    
T  3951 ggctgagaaacacatgtaaaagacgaaaatacctttcggtagttaa 3906  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 67649 - 67696
Alignment:
Q  152 ggacactgatgctactgatagcacattgggccctgaaactgactctga 199  Q
    ||||||||||||||||||||||||| |||  |||||||| ||||||||    
T  67649 ggacactgatgctactgatagcacagtggatcctgaaaccgactctga 67696  T

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Target: scaffold0341 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 18108 - 18058
Alignment:
Q  78 caaaactgactgtagttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||| | ||| ||||||||||||| ||||||||||| ||||||||||||    
T  18108 caaaaccggctgcagttaactaccgaagaaaacctcgacagttaactgccg 18058  T

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Target: scaffold0744 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 461 - 424
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  461 agttaactgccgaggaaaacctcggtagttaactgccg 424  T

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Target: scaffold0634 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 7453 - 7490
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  7453 agttgactaccgaggaaaacctcggtagttaactgccg 7490  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 50082 - 50119
Alignment:
Q  91 agttaactaccgaggaaaacctcgatagttaactgccg 128  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  50082 agttaactgccgaggaaaacctcggtagttaactgccg 50119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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