View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10891_high_7 (Length: 348)
Name: NF10891_high_7
Description: NF10891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10891_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 7 - 340
Target Start/End: Original strand, 16352624 - 16352957
Alignment:
| Q |
7 |
ctttgtgtatgtctttaaaattaaatctgcttgaagatatacacaaagactaattagccataaacttattcatatatgcatcaatagtcaattccatatt |
106 |
Q |
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| T |
16352624 |
ctttgtgtatgtctttaaaattaaatctgcttgaagatatacacaaagactaattagccataaacttattcatatatgcatcaatagtcaattccatatt |
16352723 |
T |
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| Q |
107 |
accaatttgctattgtatattcactaatattattaatatatgcatattgaactatataaaagtgctacactttgatccttctccatcaataacattcaaa |
206 |
Q |
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| T |
16352724 |
accaatttgctattgtatattcactaatattattaatatatgcatattgaactatataaaagtgctacactttgatccttctccatcaataacattcaaa |
16352823 |
T |
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| Q |
207 |
gaagtagcttcctgcaggatccactgagattcaacccttgtcgcttagactggttttattcaaaaagcgaagatgggagggtgtttttcttcaagatcat |
306 |
Q |
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| T |
16352824 |
gaagtagcttcctgcaggatccactgagattcaacccttgtcgcttagactggttttattcaaaaagcgaagatgggagggtgtttttcttcaagatcat |
16352923 |
T |
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| Q |
307 |
catgcacatcaaagaaaatccgtttggttcatct |
340 |
Q |
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| T |
16352924 |
catgcacatcaaagaaaatccgtttggttcatct |
16352957 |
T |
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