View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10891_low_15 (Length: 254)
Name: NF10891_low_15
Description: NF10891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10891_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 23030632 - 23030860
Alignment:
| Q |
1 |
tcaaccattttgcatttcacacgatttataaggaaagcgaaatatatgtgatacacttggcttttaatctaaaaatgttgtgattatatgatgaaaattg |
100 |
Q |
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| T |
23030632 |
tcaaccattttgcatttcacacgatttataac--------aatatatgtgataaacttggcttttaatctaaaaatgttgtgattatatgatgaaaattg |
23030723 |
T |
|
| Q |
101 |
caacaaaatttgcactacatataaagtgatacgtaataattatggtgattgtgnnnnnnngtttataggttgtgtgcaaatgggagcaggtggtagagcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
23030724 |
caacaaaatttgcactacatataaagtgatacgtaataattattgtgattgtgtttttttctttataggttgtgtgcaaatgggagcaggtggtagagcc |
23030823 |
T |
|
| Q |
201 |
tctaatcctccatcacaaaggaaaatagagaatgatg |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
23030824 |
tctaatcctccatcacaaaggaaaatagagaatgatg |
23030860 |
T |
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