View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10893_high_9 (Length: 233)
Name: NF10893_high_9
Description: NF10893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10893_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 785829 - 786030
Alignment:
| Q |
18 |
ctgcagcccccaccaaaacaaagagaataaaaagttagaatcattataaaacatttaacataaatttatataatagtgctaaacattgtattgagaaaga |
117 |
Q |
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| T |
785829 |
ctgcagcccccaccaaaacaaagagaataaaaagttagaatcattataaaacatttaacataaatttatataatagtgctaaacattgtattgagaaaga |
785928 |
T |
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| Q |
118 |
gcaaacatatatatcttagtgtttcattttagttgtgttgtgtctgcctttttcatagccaaacaaaggcaaaaagagcatttaacttttacatttcttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
785929 |
gcaaacatatatatcttagtgtttcattttagttgtgttgtgtctgcctttttcatagccaaacaaaggcaaaaagagcatttaacttttacatttcttt |
786028 |
T |
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| Q |
218 |
ac |
219 |
Q |
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|| |
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| T |
786029 |
ac |
786030 |
T |
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