View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10894_low_1 (Length: 318)
Name: NF10894_low_1
Description: NF10894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10894_low_1 |
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Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 19 - 302
Target Start/End: Original strand, 55162165 - 55162448
Alignment:
| Q |
19 |
aggtatatattaaaagatatatagaagaatctaattatagttttgtctctctgatttgacagaaaagaaagcgtgccgtcaccgttcatgtatcagaccc |
118 |
Q |
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| T |
55162165 |
aggtatatattaaaagatatatagaagaatctaattatagttttgtctctctgatttgacagaaaagaaagcgtgccgtcaccgttcatgtatcagaccc |
55162264 |
T |
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| Q |
119 |
taatggaaagaaattacaaggagcttctgtgtttgtagagcaaatatcaaaagactttcctattggctctgcgatatcaaagaccattcttggcaacata |
218 |
Q |
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| T |
55162265 |
taatggaaggaaattacaaggagcttctgtgtttgtagagcaaatatcaaaagactttcctattggctctgcgatagcaaagaccattcttggcaacata |
55162364 |
T |
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| Q |
219 |
ccatatcagaattggtttttgaaacggttcaatgctgcagtgtttgaaaacgagcttaaatggtatgccacagagcctcatgaa |
302 |
Q |
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| T |
55162365 |
ccatatcagaattggtttttgaaacggttcaatgctgcagtgtttgaaaacgagcttaaatggtatgccacagagcctcatgaa |
55162448 |
T |
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