View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10895_low_6 (Length: 242)

Name: NF10895_low_6
Description: NF10895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10895_low_6
NF10895_low_6
[»] chr8 (8 HSPs)
chr8 (1-92)||(19430733-19430823)
chr8 (1-92)||(19436175-19436265)
chr8 (1-92)||(19566882-19566972)
chr8 (1-92)||(19572324-19572414)
chr8 (1-92)||(31031256-31031346)
chr8 (147-224)||(34741975-34742056)
chr8 (1-92)||(33616067-33616157)
chr8 (1-92)||(13584870-13584965)
[»] chr3 (5 HSPs)
chr3 (1-92)||(13022749-13022839)
chr3 (1-92)||(33088619-33088709)
chr3 (1-92)||(53120221-53120311)
chr3 (1-92)||(38436273-38436363)
chr3 (27-92)||(20811112-20811177)
[»] chr1 (9 HSPs)
chr1 (1-89)||(38734829-38734916)
chr1 (1-92)||(13891505-13891595)
chr1 (1-92)||(14582448-14582538)
chr1 (1-92)||(26650431-26650521)
chr1 (1-92)||(5602173-5602263)
chr1 (1-85)||(39746677-39746760)
chr1 (1-92)||(31289455-31289544)
chr1 (1-92)||(12179406-12179491)
chr1 (55-92)||(10106741-10106778)
[»] scaffold0132 (2 HSPs)
scaffold0132 (1-92)||(2424-2514)
scaffold0132 (1-92)||(10384-10474)
[»] chr7 (7 HSPs)
chr7 (1-89)||(28291845-28291932)
chr7 (1-92)||(9973969-9974059)
chr7 (1-92)||(24529090-24529180)
chr7 (1-92)||(33227019-33227110)
chr7 (1-89)||(7358037-7358124)
chr7 (1-57)||(10437398-10437453)
chr7 (1-57)||(10451108-10451163)
[»] chr6 (4 HSPs)
chr6 (1-92)||(19478838-19478928)
chr6 (29-92)||(14450626-14450689)
chr6 (1-92)||(10485799-10485887)
chr6 (1-92)||(17289610-17289697)
[»] chr2 (2 HSPs)
chr2 (1-92)||(42915263-42915353)
chr2 (4-92)||(5089778-5089866)
[»] chr4 (3 HSPs)
chr4 (1-92)||(10119809-10119899)
chr4 (1-89)||(24490797-24490879)
chr4 (1-92)||(653688-653779)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-92)||(2326-2417)
scaffold0011 (1-92)||(7580-7671)
[»] chr5 (3 HSPs)
chr5 (1-92)||(13581984-13582075)
chr5 (52-92)||(14374824-14374864)
chr5 (55-92)||(7805773-7805810)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-92)||(33308-33392)


Alignment Details
Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19430823 - 19430733
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19430823 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 19430733  T

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Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19436265 - 19436175
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19436265 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 19436175  T

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Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19566972 - 19566882
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19566972 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 19566882  T

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Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19572414 - 19572324
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19572414 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 19572324  T

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Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31031346 - 31031256
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  31031346 tggaacactagttaaatctaatgagaaaa-ttggataagaaaaacacattataagaactagtgtgagtgtgtgacttaaaaatgtctcacat 31031256  T

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Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 34741975 - 34742056
Alignment:
Q  147 ttggacagatacctgcaagtattgagctgcta----ggcttttctaatttcaaccctattgccatcggcaacacactttact 224  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34741975 ttggacagatacctgcaagtattgagctgctagctaggcttttctaatttcaaccctattgccatcggcaacacactttact 34742056  T

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Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33616067 - 33616157
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||    
T  33616067 tggaacattagttaaatctagtgagaaaa-ttggataagaaaaatacaatataagaactagtgtgagtatgtggcttaaaaatgtctcacat 33616157  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13584965 - 13584870
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaa-----cacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||     ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  13584965 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaaaaaaacacaatataagaattagtgtgagcgtgtgatttaaaaatgtcccacat 13584870  T

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Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13022839 - 13022749
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13022839 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 13022749  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33088619 - 33088709
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  33088619 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacataatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 33088709  T

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Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53120311 - 53120221
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  53120311 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacgatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 53120221  T

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Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38436273 - 38436363
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||| ||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  38436273 tggagcaccagttaaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagcgtgtgacttaaaaatgtcccacat 38436363  T

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Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 20811177 - 20811112
Alignment:
Q  27 aaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20811177 aaaattggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 20811112  T

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Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38734916 - 38734829
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtccca 89  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38734916 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtccca 38734829  T

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Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13891595 - 13891505
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13891595 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtaagtgtgtgacttaaaaatgtcccacat 13891505  T

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Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14582538 - 14582448
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14582538 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 14582448  T

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Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26650431 - 26650521
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26650431 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 26650521  T

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Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5602173 - 5602263
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| ||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5602173 tggaacactagttgaatttagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 5602263  T

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Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39746677 - 39746760
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgt 85  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39746677 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgt 39746760  T

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Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31289544 - 31289455
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31289544 tggaacactagttgaatctagtgagaaaa-ttggataagaaaa-cacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 31289455  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12179491 - 12179406
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||| |||||||| |||| | | |||||||||||| |||||||||||| |||||||||||    ||||||||||||||||| ||| ||||    
T  12179491 tggaaccctagttaattctagtaa-aaaaattggata-gaaaaacacaatgtaagaactagt----gtgtgtgacttaaaaatatcctacat 12179406  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 10106778 - 10106741
Alignment:
Q  55 gaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||  |||||||||||||||||||||||||    
T  10106778 gaactagtgtggttgtgtgacttaaaaatgtcccacat 10106741  T

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Target: scaffold0132 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2424 - 2514
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2424 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 2514  T

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Target: scaffold0132; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10384 - 10474
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10384 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 10474  T

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Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28291845 - 28291932
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtccca 89  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28291845 tggaacactagttaaatctaattagaaaa-ttggataagaaaaacacaatataagaactagtgtgagcgtgtgacttaaaaatgtccca 28291932  T

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Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9974059 - 9973969
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9974059 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactaatgtgagtgtgtgacttaaaaatgtcccacat 9973969  T

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Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24529180 - 24529090
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  24529180 tggaacactagttaaatctagtgagaaaa-ttggataagaaaaacataatataagaactagtgtgagtgtgtgacttaaaaatatcctacat 24529090  T

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Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33227110 - 33227019
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataag-aaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  33227110 tggaacactagttaaatctagtgagaaaa-ttggataaggaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgttccacat 33227019  T

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Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7358124 - 7358037
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtccca 89  Q
    ||||||||||||| |||||  |||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  7358124 tggaacactagttgaatcttttgagaaaa-ttggataagaaaaacacaatgcaagaactagtgtgagcgtgtgacttaaaaatgtccca 7358037  T

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Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10437453 - 10437398
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaa 57  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  10437453 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaa 10437398  T

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Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10451163 - 10451108
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaa 57  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  10451163 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaa 10451108  T

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Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19478928 - 19478838
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19478928 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 19478838  T

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Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 14450626 - 14450689
Alignment:
Q  29 aattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14450626 aattggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 14450689  T

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Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10485887 - 10485799
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||  ||||| ||||||||||||| ||||||    
T  10485887 tggaatactagttaaatctagtgagaaaaattggat-agaaaaacacaatgtaagaactagtgt--gtgtgagacttaaaaatgttccacat 10485799  T

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Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17289610 - 17289697
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| ||||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  17289610 tggaacactagttgaatctagtgagaaaa-ttggata-gaaaaacacaatgtaagaactagtgt--gtgtgtgacttaaaaatgtcccacat 17289697  T

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Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42915353 - 42915263
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42915353 tggaacactagttgaatctagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 42915263  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 5089866 - 5089778
Alignment:
Q  4 aacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgactt-aaaaatgtcccacat 92  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||    
T  5089866 aacactagttgaatttagtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgcgggacttaaaaaatgtcccacat 5089778  T

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Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10119809 - 10119899
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||  |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10119809 tggaacactagttgaatctcgtgagaaaa-ttggataagaaaaacacaatgtaagaactagtgtgagtgtgtgacttaaaaatgtcccacat 10119899  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24490879 - 24490797
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtccca 89  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||    |||||| ||||||||||||||||    
T  24490879 tggaacactagttaaatctagtgag-aaaattggat-agaaaaacacaatgtaagaactagt----gtgtgtaacttaaaaatgtccca 24490797  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 653779 - 653688
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaa-cacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| |||||| |||| || ||| | |||||||||||||||  | |||||||||||||||||||||||    
T  653779 tggaacactagtttaatctagtgagaaaa-ttggatgagaataatcactacataagaactagtgtggttatgtgacttaaaaatgtcccacat 653688  T

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Target: scaffold0011 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2417 - 2326
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgactta-aaaatgtcccacat 92  Q
    ||||||||||||| || ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  2417 tggaacactagttgaacctagtgagaaaa-ttggataagaaaaacacaatgaaagaactagtgtgagtgtgtgacttaaaaaatgtcccacat 2326  T

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Target: scaffold0011; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7671 - 7580
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgactta-aaaatgtcccacat 92  Q
    ||||||||||||| || ||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  7671 tggaacactagttgaacctagtgagaaaa-ttggataagaaaaacacaatgaaagaactagtgtgagtgtgtgacttaaaaaatgtcccacat 7580  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13581984 - 13582075
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaa-cacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||| |||||| |||||||| |||||| |||| || ||| | |||||||||||||||  | |||||||||||||||||||||||    
T  13581984 tggaacactagttcaatctagtgagaaaa-ttggatgagaataatcactacataagaactagtgtggttatgtgacttaaaaatgtcccacat 13582075  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 14374864 - 14374824
Alignment:
Q  52 taagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  14374864 taagaactagtgtggttgtgtgacttaaaaatgtcccacat 14374824  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 7805810 - 7805773
Alignment:
Q  55 gaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    |||||||||||  |||||||||||||||||||||||||    
T  7805810 gaactagtgtggttgtgtgacttaaaaatgtcccacat 7805773  T

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Target: scaffold0067 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33308 - 33392
Alignment:
Q  1 tggaacactagttaaatctaatgagaaaaattggataagaaaaacacaatataagaactagtgtgagtgtgtgacttaaaaatgtcccacat 92  Q
    ||||| ||||||||| |||| |||  ||||||||||| |||||||||||| ||||||||||||||    |||||||||||||||||||||||    
T  33308 tggaatactagttaattctagtga--aaaattggata-gaaaaacacaatgtaagaactagtgtg----tgtgacttaaaaatgtcccacat 33392  T

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