View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10896_high_2 (Length: 387)
Name: NF10896_high_2
Description: NF10896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10896_high_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 336; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 17 - 379
Target Start/End: Original strand, 40825154 - 40825517
Alignment:
| Q |
17 |
cagtggtgtgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaacttt |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
40825154 |
cagtggtgtgagaatatgcaatgcaagagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcaggaacttt |
40825253 |
T |
|
| Q |
117 |
aaccatctgcaatttcagaaacccatcttcctttgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtc |
215 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
40825254 |
aaccatctgcaatttcaaaaacccatcttcctttgtacttgttgtcttattattgaccttttcacactgcaaaagtgtccttctaacacacccacctgtc |
40825353 |
T |
|
| Q |
216 |
cagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccac |
315 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40825354 |
cagttgtgtctattccactcctgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccac |
40825453 |
T |
|
| Q |
316 |
atataccataaacgtcacattccgattgttggctactccatataatttgtacatctttcttctc |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40825454 |
atataccataaacgtcacattccgattgttggctactccatataatttgtacatctttcttctc |
40825517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 70 - 334
Target Start/End: Original strand, 40820539 - 40820804
Alignment:
| Q |
70 |
catatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatctgcaatttcagaaacccatcttcctttgtacttgtt-tcttattat |
168 |
Q |
| |
|
||||||||||||||||| ||| || || |||||| || | ||||| |||| |||||||||| |||||||| |||||||||||| || | ||||| |
|
|
| T |
40820539 |
catatgtctggtgtaacagctacaccttctgcaaattctgaaacttcaaccgcatgcaatttcaaaaacccattttcctttgtactcgtggttttattgc |
40820638 |
T |
|
| Q |
169 |
tgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaaca |
268 |
Q |
| |
|
||| | ||||||||| |||| ||||||| |||||| ||| ||| ||||| || ||| || |||| || | |||| |||||| |||||||||| ||||| |
|
|
| T |
40820639 |
tgatcctttcacactccaaaggtgtcctcctaacacaccgacccgtccaattatgtatactccattcttctatgtttctgggtacaaatcctctaaaaca |
40820738 |
T |
|
| Q |
269 |
actgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatataccataaacgtcaca |
334 |
Q |
| |
|
|| ||||| || | ||||| |||||||||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
40820739 |
gctacatattggcgagctcaataaactacagcttgcaaatgctgcacatataccataaacatcaca |
40820804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 21 - 380
Target Start/End: Complemental strand, 20287983 - 20287620
Alignment:
| Q |
21 |
ggtgtgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaacc |
120 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||||| |
|
|
| T |
20287983 |
ggtgtgagaatatgcaatgcaagagcaattctctaagcatcggcttctacatatgtctggtgtaagtgctgaaccttgtgcaaaatcaggaactttaacc |
20287884 |
T |
|
| Q |
121 |
atctgcaatttcagaaacccatcttcctt---tgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtcc |
216 |
Q |
| |
|
|||| |||||||| ||| ||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
20287883 |
atcttcaatttcaaaaatccatcttccttctttgtacttgtggtgttattattgaccctttcacactgcaaaagtatccttctaacacacccaccagtcc |
20287784 |
T |
|
| Q |
217 |
agttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccaca |
316 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
20287783 |
agttgtgtctattccactcctgtttgttcctgggttcaaatcctctcaaacaactgcatattggtaacttcaatgaactacagcttgcgaatgccccaca |
20287684 |
T |
|
| Q |
317 |
tataccataaacgtcacattccgattgttggctactccatataatttgtacatctttcttctca |
380 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| || ||||||||||| |||||||||||| |
|
|
| T |
20287683 |
tataccataaatgtcacattccgatagttggctagtctgtataatttgtaattctttcttctca |
20287620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 25 - 334
Target Start/End: Complemental strand, 20293347 - 20293037
Alignment:
| Q |
25 |
tgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatct |
124 |
Q |
| |
|
|||||||| |||||||| |||||||| | | ||| |||| | ||||| ||||||||||| ||| || || ||||||||| |||||||||||||||| |
|
|
| T |
20293347 |
tgagaatacgcaatgcaggagcaattatgcaaacataagcttctgcatatttctggtgtaacagctacaccttctgcaaaatctggaactttaaccatct |
20293248 |
T |
|
| Q |
125 |
gcaatttcagaaacccatcttcctttgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtg |
223 |
Q |
| |
|
|||||||| ||||||||||||||||||||| || | ||||| |||||| ||||||||| |||| ||||||| |||||| ||||||| ||||| || || |
|
|
| T |
20293247 |
tcaatttcaaaaacccatcttcctttgtactggtggttttattgttgaccctttcacactccaaaggtgtcctcctaacacacccaccggtccaattatg |
20293148 |
T |
|
| Q |
224 |
tctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatatacca |
323 |
Q |
| |
|
| || |||| || | |||| |||||| |||||||||||||||| || ||||| ||| | |||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
20293147 |
tttactccattcttctatgtttctgggtacaaatcctctcaaacagctacatattggtgagctcaatgaactacagcttgcaaaggccccacatatacca |
20293048 |
T |
|
| Q |
324 |
taaacgtcaca |
334 |
Q |
| |
|
||||| ||||| |
|
|
| T |
20293047 |
taaacatcaca |
20293037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 25 - 318
Target Start/End: Original strand, 20169398 - 20169692
Alignment:
| Q |
25 |
tgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatct |
124 |
Q |
| |
|
||||||||||||| ||| ||||||||||| | |||| ||||| | |||||||||| |||||| | ||| || |||||||| |||||||||| ||| | |
|
|
| T |
20169398 |
tgagaatatgcaaggcaagagcaattctccaagcataggcttctgcatatgtctgatgtaacagtcaaaccttcagcaaaatctggaactttaatcattt |
20169497 |
T |
|
| Q |
125 |
gcaatttcagaaacccatcttcctttgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtg |
223 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||| | ||||| |||||| |||||||||||||| ||||||||| |||| ||||||| |||||||| || |
|
|
| T |
20169498 |
gtagtttcaaaaacccatcttcctttgtacttgtggttttattgttgaccctttcacactgcaaaggtgtccttcgaacacacccaccggtccagttatg |
20169597 |
T |
|
| Q |
224 |
tctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacata |
318 |
Q |
| |
|
| ||||||| | | |||| ||||||||||| ||||||||||| || ||| | ||| | |||||||| |||| |||| |||||||||||||| |
|
|
| T |
20169598 |
tatattccattgttctatgtttctgggttcaaaccctctcaaacagctacatgttggtgagctcaatgaattacaacttgcaaatgccccacata |
20169692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 342
Target Start/End: Complemental strand, 20302543 - 20302231
Alignment:
| Q |
31 |
tatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatctgcaatt |
130 |
Q |
| |
|
|||||| |||| ||||||||||| | |||| |||| | ||||| ||||||||||| ||| || || |||||||||||||||||||||||||||||||| |
|
|
| T |
20302543 |
tatgcagtgcaagagcaattctccaagcataagcttctgcatatatctggtgtaacagctacaccttctgcaaaatcgggaactttaaccatctgcaatt |
20302444 |
T |
|
| Q |
131 |
tcagaaacccatcttcctttgtacttgt-ttcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtgtctatt |
229 |
Q |
| |
|
||| |||||||||||| ||||||||||| | ||||| |||||| |||||||||||||| | | || |||||| |||||| ||||| |||| |||||| |
|
|
| T |
20302443 |
tcaaaaacccatcttcttttgtacttgtggttttattgttgaccctttcacactgcaaagatcttctcctaacacacccactagtccaattgtttctatt |
20302344 |
T |
|
| Q |
230 |
ccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatataccataaacg |
329 |
Q |
| |
|
||| ||| || |||| | || ||||| ||| ||||||| ||||| || || |||||||| |||| ||| ||||||||| || ||||||||||| |
|
|
| T |
20302343 |
ccattcctgtatgttgattggatcaaaccctttcaaacagctgcaaattggcgtgctcaatgaattacaaattgcaaatgccccgcaaataccataaaca |
20302244 |
T |
|
| Q |
330 |
tcacattccgatt |
342 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
20302243 |
tcacactccgatt |
20302231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 99 - 380
Target Start/End: Original strand, 20063946 - 20064213
Alignment:
| Q |
99 |
tgcaaaatcgggaactttaaccatctgcaatttcagaaacccatcttcctttgtacttgtttcttattattgaccttttcacactgcaaaagtgtccttc |
198 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||| || ||||||| | ||| |||||| | |
|
|
| T |
20063946 |
tgcaaaatcaggaactttaaccatcttcaatttcaaaaacccatcttcttttgtactttttg--------------tttcacatttcaatgatgtcctcc |
20064031 |
T |
|
| Q |
199 |
taacatacccacctgtccagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactaca |
298 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||| ||| || || |||| |||||||||||| ||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
20064032 |
taacacacccacctgtccagttgtttctattccattcctgtatgctcctaggttcaaatcctttcaaacagctgcatattggtgtgttcaatgaactaca |
20064131 |
T |
|
| Q |
299 |
gcttgaaaatgccccacatataccataaacgtcacattccgattgttggctactccatataatttgtacatctttcttctca |
380 |
Q |
| |
|
||||| ||||||||||||| ||||||| || ||||| || |||| | ||||| ||||| ||| ||| || ||||||| |||| |
|
|
| T |
20064132 |
gcttgcaaatgccccacatgtaccatatacatcacactctgattttcggctagtccatgtaacttgcacttctttctcctca |
20064213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 25 - 334
Target Start/End: Complemental strand, 20272540 - 20272230
Alignment:
| Q |
25 |
tgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatct |
124 |
Q |
| |
|
||||||||||||| ||| ||||||||||| | |||| ||||| | |||||||| |||||||| | ||| || |||||||| |||||||||| | ||| |
|
|
| T |
20272540 |
tgagaatatgcaaggcaagagcaattctccaagcataggcttctgcatatgtcaggtgtaacgattaaaccttcagcaaaatctggaactttaatcgtct |
20272441 |
T |
|
| Q |
125 |
gcaatttcagaaacccatcttcctttgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtg |
223 |
Q |
| |
|
| | ||||| || ||||||||||||||||||||| | ||||| | |||| |||| ||||||||| ||||| | |||||| ||||||| | |||||||| |
|
|
| T |
20272440 |
gtagtttcaaaatcccatcttcctttgtacttgtggttttattgtggaccctttcgcactgcaaaggtgtcttcctaacacacccaccagaccagttgtt |
20272341 |
T |
|
| Q |
224 |
tctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatatacca |
323 |
Q |
| |
|
| | ||||| || ||| | || | |||||||||||| ||| ||| |||||||| ||| | || ||||||||||| ||| |||||| |||||||||||| |
|
|
| T |
20272340 |
tattttccattcacgtatatttttaggttcaaatcctttcagacagctgcatattggtgaggtcgatgaactacagattgcaaatgcgccacatatacca |
20272241 |
T |
|
| Q |
324 |
taaacgtcaca |
334 |
Q |
| |
|
||||| ||||| |
|
|
| T |
20272240 |
taaacatcaca |
20272230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 337
Target Start/End: Complemental strand, 20242338 - 20242025
Alignment:
| Q |
25 |
tgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatct |
124 |
Q |
| |
|
|||||||| |||| || ||||||||||||| ||| | || | ||| |||| |||||||||||| ||| || |||||||| |||||||||||||||| |
|
|
| T |
20242338 |
tgagaatacgcaacacaagagcaattctctaaacataagattctgcatgtgtcaggtgtaactgctaaaccttcagcaaaatctggaactttaaccatct |
20242239 |
T |
|
| Q |
125 |
gcaatttcagaaacccatcttcctttgtacttgt-ttcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtg |
223 |
Q |
| |
|
| | |||||||||||||||||||||| ||||||| | ||||| ||||| ||| |||| ||||| || || |||||| |||| || |||||||||| |
|
|
| T |
20242238 |
gtagtttcagaaacccatcttcctttctacttgtggttttattggtgacccttttacacagcaaaggtctctgcctaacacacccgccagtccagttgtt |
20242139 |
T |
|
| Q |
224 |
tctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatatacca |
323 |
Q |
| |
|
|||| |||| || || | || ||||||||||||||| ||||||||||||| | ||| | |||||||| ||||||||| ||| | ||||||| |||| |
|
|
| T |
20242138 |
tctactccattcacgagtatttctgggttcaaatcctttcaaacaactgcaaactggtgagctcaatgaattacagcttgtaaaatctccacatagacca |
20242039 |
T |
|
| Q |
324 |
taaacgtcacattc |
337 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
20242038 |
taaacatcacattc |
20242025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 326
Target Start/End: Complemental strand, 20300476 - 20300174
Alignment:
| Q |
25 |
tgagaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatct |
124 |
Q |
| |
|
||||||| |||| ||| |||||||||| | |||| |||| | ||||||||||||| ||| ||| || || |||||| || |||||||||||||||| |
|
|
| T |
20300476 |
tgagaattcgcaacgcatgagcaattctacaagcataagcttctgcatatgtctggtgcaacagctacaccttctgcaaattcaggaactttaaccatct |
20300377 |
T |
|
| Q |
125 |
gcaatttcagaaacccatcttcctttgtacttgt-ttcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtg |
223 |
Q |
| |
|
||||| ||| ||| ||||||||||||||||| || | ||||| |||||| ||| |||||| ||| |||||| || ||| ||||||| ||||| |||| |
|
|
| T |
20300376 |
gcaatatcaaaaatccatcttcctttgtactggtggttttattgttgaccctttaacactgaaaagctgtcctcctgacacacccaccagtccaattgtt |
20300277 |
T |
|
| Q |
224 |
tctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggt-aacttcaatgaactacagcttgaaaatgccccacatatacc |
322 |
Q |
| |
|
||||||||| || || | | ||||||||||| || ||||||| |||| || ||| ||||| | |||||||||||||| |||| |||| |||||||| |
|
|
| T |
20300276 |
tctattccattcttgtatcgacttgggttcaaattctttcaaacaggtgcaaattggtgaactt-agtgaactacagcttgcaaataccccgcatatacc |
20300178 |
T |
|
| Q |
323 |
ataa |
326 |
Q |
| |
|
|||| |
|
|
| T |
20300177 |
ataa |
20300174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 337
Target Start/End: Complemental strand, 20262820 - 20262658
Alignment:
| Q |
175 |
tttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgca |
274 |
Q |
| |
|
|||||||||||||| || ||| |||||| |||| || |||||||||| |||| |||| || || | || ||||||||||||||| ||||||||||||| |
|
|
| T |
20262820 |
tttcacactgcaaaggtctccgcctaacacacccgccagtccagttgtttctactccattcacgagtatttctgggttcaaatcctttcaaacaactgca |
20262721 |
T |
|
| Q |
275 |
tatcggtaacttcaatgaactacagcttgaaaatgccccacatataccataaacgtcacattc |
337 |
Q |
| |
|
|| |||| | |||||||| ||||||||| |||| | ||||| | ||||||||| |||||||| |
|
|
| T |
20262720 |
taccggtgagctcaatgaattacagcttgtaaattctccacagagaccataaacatcacattc |
20262658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 334
Target Start/End: Complemental strand, 20278281 - 20277974
Alignment:
| Q |
28 |
gaatatgcaatgcacgagcaattctctatgcattggcttttacatatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatctgca |
127 |
Q |
| |
|
|||||||||| ||| || |||||||| | |||| ||||| | || |||||||||||||| ||| || || |||||| | || ||||| ||| |||| | |
|
|
| T |
20278281 |
gaatatgcaaggcaagaacaattctccaagcataggcttctgcaaatgtctggtgtaacagctaaagcttcagcaaaagctggtactttcaccgtctgta |
20278182 |
T |
|
| Q |
128 |
atttcagaaacccatcttcctttgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttctaacatacccacctgtccagttgtgtct |
226 |
Q |
| |
|
|||||| |||| ||||||||||| | | ||| | ||||| || || | |||||||||| || || |||||| ||||||| |||||||| |||| |
|
|
| T |
20278181 |
atttcaaaaacgcatcttcctttctccgtgtggttttattgttatccctactacactgcaaagtggttctcctaacacacccaccggtccagttatgtcc |
20278082 |
T |
|
| Q |
227 |
attccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatataccataa |
326 |
Q |
| |
|
|||||| || || |||| || |||||||||||||||| ||| | ||||| ||| | ||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
20278081 |
attccattcttgtatgtttctaggttcaaatcctctcagacagatacatattggtgagaacaatgaactacagcttgcaaatgccccacatataccgtaa |
20277982 |
T |
|
| Q |
327 |
acgtcaca |
334 |
Q |
| |
|
|| ||||| |
|
|
| T |
20277981 |
acatcaca |
20277974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 334
Target Start/End: Complemental strand, 20230313 - 20230078
Alignment:
| Q |
100 |
gcaaaatcgggaactttaaccatctgcaatttcagaaacccatcttcctttgtacttgtt-tcttattattgaccttttcacactgcaaaagtgtccttc |
198 |
Q |
| |
|
|||||||| ||||||||||||||||| | ||||| |||||| ||||||||| ||| ||| | ||||| || | ||| ||||||||| || ||| | |
|
|
| T |
20230313 |
gcaaaatctggaactttaaccatctgtagtttcaaaaacccgtcttcctttctacctgtggttttattgccgatccttttacactgcaatggtttccgcc |
20230214 |
T |
|
| Q |
199 |
taacatacccacctgtccagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactaca |
298 |
Q |
| |
|
||||| |||| || |||||||||| ||||||||| ||| || ||||| || ||||| ||| ||||||| ||||| || || |||||||| |||| |
|
|
| T |
20230213 |
taacacacccgccagtccagttgtttctattccattcctgtatgttcaccggatcaaaccctttcaaacagctgcaaattggcgtgctcaatgaattaca |
20230114 |
T |
|
| Q |
299 |
gcttgaaaatgccccacatataccataaacgtcaca |
334 |
Q |
| |
|
||||| |||||||||||||| ||||||||| ||||| |
|
|
| T |
20230113 |
gcttgtaaatgccccacatagaccataaacatcaca |
20230078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 20090451 - 20090539
Alignment:
| Q |
70 |
catatgtctggtgtaactgctgaactttgtgcaaaatcgggaactttaaccatctgcaatttcagaaacccatcttcctttgtacttgt |
158 |
Q |
| |
|
||||| ||||||| ||| ||| || || ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
20090451 |
catatttctggtgcaacagctacaccttctgcaaaatctggaactttaaccatcttcaatttcaaaaacccatcttcctttgtatttgt |
20090539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 356
Target Start/End: Complemental strand, 20282710 - 20282530
Alignment:
| Q |
178 |
cacactgcaaaagtgtccttctaacatacccacctgtccagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaacaac--tgcat |
275 |
Q |
| |
|
||||||||||| | || || |||||| ||||||| |||||||| ||| ||||||| || || |||| || |||||||||||||||| ||| | ||| |
|
|
| T |
20282710 |
cacactgcaaaggggttctcctaacacacccaccggtccagttatgtatattccattcttgtatgtttctaggttcaaatcctctcagacagagatacat |
20282611 |
T |
|
| Q |
276 |
atcggtaacttcaatgaactacagcttgaaaatgccccacatataccataaacgtcacattccgattgttggctactccat |
356 |
Q |
| |
|
|| ||| | ||||||| ||||||||| |||||||||||||||||||||| | ||||| || || | |||||| |||||| |
|
|
| T |
20282610 |
attggtgagaccaatgaattacagcttgcaaatgccccacatataccataagcatcacactctgagtcttggcttctccat |
20282530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 20090582 - 20090659
Alignment:
| Q |
249 |
ggttcaaatcctctcaaacaactgcatatcggtaacttcaatgaactacagcttgaaaatgccccacatataccataa |
326 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| | |||||| || |||| ||| |||||||||||| || |||||| |
|
|
| T |
20090582 |
ggttcaaatcctctcaaacaaatgcatatcggtgagttcaattaattacacgttgcaaatgccccacaaatgccataa |
20090659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 47602088 - 47602164
Alignment:
| Q |
190 |
gtgtccttctaacatacccacctgtccagttgtgtctattccactcccgtttgttcctgggttcaaatcctctcaaa |
266 |
Q |
| |
|
||||||| |||||| ||||||| ||||| || ||||||||||| | | ||||||||| |||||||| ||| ||||| |
|
|
| T |
47602088 |
gtgtcctcctaacacacccaccagtccatttttgtctattccatttctctttgttccttggttcaaaccctttcaaa |
47602164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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