View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10896_low_16 (Length: 242)
Name: NF10896_low_16
Description: NF10896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10896_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37797040 - 37797263
Alignment:
| Q |
1 |
catttcttttatcatttacttcttcctcgtatggtgtttcactatagggtgttgtcacctggtttatccattatctgcaaattcttgcactagctttgcc |
100 |
Q |
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| T |
37797040 |
catttcttttatcatttacttcttcctcgtatggtgtttcactatagggtgttgtcacctggtttatccattatctgcaaattcttgcactagtttttcc |
37797139 |
T |
|
| Q |
101 |
ttttcattgccaagctctttgtcaataaaccttacatgaattgattcttccaccattaaggtttcttcgttatatactctttatactctaggtcgttcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37797140 |
ttttcattgccaagctctttgtcaataaaccttacatgaattgattcttccaccattaaggtttcttcgttatatactctttatactctaggtcgttcaa |
37797239 |
T |
|
| Q |
201 |
aatatcctcaaaacacatacattt |
224 |
Q |
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||||| || ||||||||||||||| |
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| T |
37797240 |
aatattctaaaaacacatacattt |
37797263 |
T |
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