View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10899_low_11 (Length: 277)
Name: NF10899_low_11
Description: NF10899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10899_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 47117026 - 47116765
Alignment:
| Q |
1 |
taatcgttaaaaggtgatcgatcgagtcattgatacgttgatattgcttaccttgctttgtgatttgatcgttaaaaggtatgaatatttatctccttga |
100 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117026 |
taatcgttaaaaggtgatcga----gtcattgatacgttgatattgcttaccttgctttgtgatttgatcgttaaaaggtatgaatatttatctccttga |
47116931 |
T |
|
| Q |
101 |
attgaaactaaagatataaaagaaattggttattgaatatctttgataaaatataactattgtaattacctgagaagcgatgaaacaaaacaatgtcagn |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47116930 |
attgaaactaaagatataaaagaaattggttattgaatatctttgataaaatataactattgtaattacctgagaagcgatgaaacaaaacaatgtcaga |
47116831 |
T |
|
| Q |
201 |
nnnnnngagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtgatgtccatct |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
47116830 |
aaaaaagagatatcataaggaaatgaaataacaagggtatgaggaagcttggagtggtgtccatct |
47116765 |
T |
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