View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10901_high_25 (Length: 211)
Name: NF10901_high_25
Description: NF10901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10901_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 32335312 - 32335372
Alignment:
| Q |
14 |
agagagagtaccggaacggtgagttcggtagttggtaatgaaacaaactggttgttgagta |
74 |
Q |
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| T |
32335312 |
agagagagtaccggaacggtgagttcggtagttggtaatgaaacaaactggttgttgagta |
32335372 |
T |
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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 32335456 - 32335498
Alignment:
| Q |
152 |
tgttcatgttcttgttcttcgtttgaaaagttaaggaaatcat |
194 |
Q |
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| T |
32335456 |
tgttcatgttcttgttcttcgtttgaaaagttaaggaaatcat |
32335498 |
T |
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