View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10902_high_2 (Length: 269)
Name: NF10902_high_2
Description: NF10902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10902_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 25025632 - 25025396
Alignment:
| Q |
14 |
cagagaatgaaaagtaaaataaaaatcaaagtaacttggatccaaacactgattggtatgtcagtcatacaatttctagttattctaattataacatcaa |
113 |
Q |
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| T |
25025632 |
cagagaatgaaaaataaaataaaaatcaaagtaacttggatccaaacactgattggtatgtcagtcatacaatttctagttattctaattataacatcaa |
25025533 |
T |
|
| Q |
114 |
attccatgcttagatgaacgcaatgcaacagnnnnnnngttccctaagagattaaattgaacgcacgcattcgattaatttattcatcttttctataatc |
213 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
25025532 |
attccatgcttagatgaacgcaatgcaacagtttttttgttccctaagagattaaattgaacgcacgcattcgattaatttattcattttttctataatc |
25025433 |
T |
|
| Q |
214 |
tataaacttgtttgtcttattaacctcatgcatgctc |
250 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
25025432 |
tataaacttgtttgtcttattaacctcatgcatgctc |
25025396 |
T |
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