View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10904_low_9 (Length: 241)
Name: NF10904_low_9
Description: NF10904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10904_low_9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 241
Target Start/End: Complemental strand, 32551881 - 32551655
Alignment:
| Q |
15 |
gggtaaactagtaagaactataactaactgtgtcaccgcagttaggtgttgctgtagatagcctttcctagtctttcatgtaactaactttctattgata |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32551881 |
gggtaaactagtaagaactataactaactgtgtcaccgcagttaggtgttgctgtagatagcctttcctagtctttcatgtaactaactttctattgata |
32551782 |
T |
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| Q |
115 |
acaaatctcaacaaatttcagagatgaatacacaatctctcaagtttctatagctttatcgcttttctgttatggtatatagagctttctagttccattt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32551781 |
acaaatctcaacaaatttcagagatgaatacacaatctctcaagtttctatagctttatcgcttttctgttatggtatatagagctttctagttccattt |
32551682 |
T |
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| Q |
215 |
ctacggcttccgagtctgattcttctc |
241 |
Q |
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||||||||||||||||||||||||||| |
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| T |
32551681 |
ctacggcttccgagtctgattcttctc |
32551655 |
T |
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