View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10905_high_7 (Length: 346)
Name: NF10905_high_7
Description: NF10905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10905_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 14 - 331
Target Start/End: Original strand, 48720902 - 48721231
Alignment:
| Q |
14 |
agatcaagtagtatatatgctcggatacgtaaaatttaaatatcatatatcagctacattttttgtttgactcatcataccagctacatagaaattttcc |
113 |
Q |
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| T |
48720902 |
agatcaagcagtatatatgctcggatacgtaaaatttaaatatcatatatcagctacattttctgtttgactcatcataccagctacatagaaattttcc |
48721001 |
T |
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| Q |
114 |
aagttatataatatgaacgcttatgtaacatgtatgtcacggttattattttttattcaac--tgtgtttgaaacttggaaatgacgagaactaatatta |
211 |
Q |
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| T |
48721002 |
aagttatataatatgaacgcttatgtaacatgtatgtcacggttattattttttattcaactgtgtgtttgaaacttggaaatgacgagaactaatatta |
48721101 |
T |
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| Q |
212 |
ttcttttaaagggaaatgttatgagcattttatctaacattcactctcttattagatgaaacatatacgaatc----------ttgtgagattaactttc |
301 |
Q |
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| T |
48721102 |
ttcttttaaagggaaatgttatgagcattttatctaacattcactctcttattagatgaaacatatgcgaatcctattattttatgtgagattaactttc |
48721201 |
T |
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| Q |
302 |
aaagtacgcgagattgaggaggttggtggt |
331 |
Q |
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| T |
48721202 |
aaagtacgcgagattgaggaggttggtggt |
48721231 |
T |
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