View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10906_high_3 (Length: 405)

Name: NF10906_high_3
Description: NF10906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10906_high_3
NF10906_high_3
[»] chr2 (12 HSPs)
chr2 (18-68)||(944814-944864)
chr2 (18-87)||(38935361-38935430)
chr2 (18-78)||(11386352-11386412)
chr2 (24-70)||(1862670-1862716)
chr2 (23-68)||(16564424-16564469)
chr2 (18-71)||(24037598-24037651)
chr2 (18-68)||(7932786-7932836)
chr2 (17-78)||(4445871-4445932)
chr2 (18-71)||(10459309-10459362)
chr2 (18-71)||(16180449-16180502)
chr2 (24-57)||(33615300-33615333)
chr2 (18-78)||(31469114-31469174)
[»] chr6 (4 HSPs)
chr6 (18-76)||(2282441-2282499)
chr6 (18-50)||(33822331-33822363)
chr6 (18-71)||(30531221-30531274)
chr6 (18-71)||(31323857-31323910)
[»] chr5 (6 HSPs)
chr5 (24-78)||(30293425-30293479)
chr5 (24-93)||(12619668-12619737)
chr5 (18-78)||(39030606-39030666)
chr5 (23-84)||(17555945-17556006)
chr5 (18-50)||(968317-968349)
chr5 (18-78)||(2424445-2424505)
[»] chr3 (3 HSPs)
chr3 (26-84)||(11256576-11256634)
chr3 (18-71)||(26104261-26104314)
chr3 (18-78)||(47783121-47783181)
[»] chr7 (5 HSPs)
chr7 (18-78)||(23971192-23971252)
chr7 (18-78)||(27147604-27147664)
chr7 (18-68)||(3769770-3769820)
chr7 (23-84)||(14773519-14773580)
chr7 (23-84)||(15223971-15224032)
[»] scaffold0034 (1 HSPs)
scaffold0034 (23-68)||(94994-95039)
[»] chr8 (5 HSPs)
chr8 (18-59)||(33557801-33557842)
chr8 (18-68)||(9548066-9548116)
chr8 (18-60)||(13210007-13210049)
chr8 (25-78)||(35901042-35901095)
chr8 (24-68)||(37627927-37627971)
[»] chr1 (3 HSPs)
chr1 (24-61)||(5056318-5056355)
chr1 (18-71)||(31784778-31784831)
chr1 (18-71)||(37918928-37918981)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-60)||(51246-51288)


Alignment Details
Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 944814 - 944864
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  944814 atttagttcaaaatttgtaccaaatacatcaacttatgttgactaattttt 944864  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 38935430 - 38935361
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatatttagagacaga 87  Q
    |||| ||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||| | ||||||    
T  38935430 attttgttcaaaatctgtatcaaatacatcaacttatgttgactcatttttgcttatattttgggacaga 38935361  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11386352 - 11386412
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    ||||| ||||||||||||||||||||||||||| ||||||||  || ||||||| ||||||    
T  11386352 atttaattcaaaatttgtatcaaatacatcaacttatgttgatcaaattttgcttatattt 11386412  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 1862716 - 1862670
Alignment:
Q  24 ttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgc 70  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||    
T  1862716 ttcaaaatttgtgtcaaatacatcaacttatgttgactcatttttgc 1862670  T

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Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 16564424 - 16564469
Alignment:
Q  23 gttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  16564424 gttcaaaatttgtaccaaatacatcaacttatgttgactcattttt 16564469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 24037651 - 24037598
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| |||||||||||||| |||||| |||||| |||||||||| |||||||||    
T  24037651 attttgttcaaaatttgtaccaaatatatcaacttatgttgactcatttttgct 24037598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7932786 - 7932836
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    |||| ||||||||||| ||||| |||||||||| |||||||||| ||||||    
T  7932786 atttggttcaaaatttatatcagatacatcaacttatgttgactcattttt 7932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 4445932 - 4445871
Alignment:
Q  17 catttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    ||||| |||||||||||||| ||||||||||||  ||| || ||| ||||||||| ||||||    
T  4445932 cattttgttcaaaatttgtaccaaatacatcaatttatattaacttatttttgcttatattt 4445871  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 10459309 - 10459362
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| ||||||||||||||||| || ||||||| ||||||||| ||| ||||||    
T  10459309 atttggttcaaaatttgtatcagatgcatcaacttatgttgaccaatctttgct 10459362  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 16180502 - 16180449
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| ||||||||||| |||  ||||||||||  ||||||||||||||||||||    
T  16180502 atttggttcaaaatttatatttaatacatcaatttatgttgactaatttttgct 16180449  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 33615300 - 33615333
Alignment:
Q  24 ttcaaaatttgtatcaaatacatcaacatatgtt 57  Q
    ||||||||||||||||||||||||||| ||||||    
T  33615300 ttcaaaatttgtatcaaatacatcaacttatgtt 33615333  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 31469114 - 31469174
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    |||| ||| |||||||||||||||||||| ||| |  |||||| |||||||||| ||||||    
T  31469114 atttggttaaaaatttgtatcaaatacattaactttcgttgaccaatttttgcttatattt 31469174  T

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Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 2282441 - 2282499
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatat 76  Q
    ||||||||||||| ||||||||||||||||||  |||||| ||||||||||||| ||||    
T  2282441 atttagttcaaaaattgtatcaaatacatcaatttatgttaactaatttttgcttatat 2282499  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 33822331 - 33822363
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaac 50  Q
    |||||||||||||||||||||||||||||||||    
T  33822331 atttagttcaaaatttgtatcaaatacatcaac 33822363  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 30531221 - 30531274
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| ||||||| |||||| ||||||||||||| |||||||| | |||||||||    
T  30531221 atttggttcaaagtttgtaccaaatacatcaacttatgttgagtcatttttgct 30531274  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 31323857 - 31323910
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| |||||||||||||| || |||||||||| |||||||||  |||||||||    
T  31323857 attttgttcaaaatttgtaccagatacatcaacttatgttgacctatttttgct 31323910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 30293425 - 30293479
Alignment:
Q  24 ttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| || ||||||    
T  30293425 ttcaaaatttatatcaaatacatcaacatatgttgactcatttttacttatattt 30293479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 12619668 - 12619737
Alignment:
Q  24 ttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatatttagagacagatgaaat 93  Q
    |||||||||| |||||||||||||||| ||||||||   ||||||||| |||||| |||||  |||||||    
T  12619668 ttcaaaatttatatcaaatacatcaacttatgttgatccatttttgcttatattttgagacgaatgaaat 12619737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 39030606 - 39030666
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    |||| ||| |||||||||| ||||||||| ||| | |||||||||||||||||| ||||||    
T  39030606 atttggttaaaaatttgtaccaaatacattaacttttgttgactaatttttgcttatattt 39030666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 17556006 - 17555945
Alignment:
Q  23 gttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatatttagagac 84  Q
    ||||||||||| ||||||||| |||||| || ||||||| |||||| || |||||| |||||    
T  17556006 gttcaaaatttatatcaaatatatcaacttacgttgactcatttttacttatattttgagac 17555945  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 968349 - 968317
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaac 50  Q
    ||||||||||||||||||| |||||||||||||    
T  968349 atttagttcaaaatttgtaccaaatacatcaac 968317  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2424505 - 2424445
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    |||| |||||||||||||| || |||||||| | |||||| || |||||||||| ||||||    
T  2424505 atttggttcaaaatttgtaccatatacatcagcttatgttaacaaatttttgcttatattt 2424445  T

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Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 11256576 - 11256634
Alignment:
Q  26 caaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatatttagagac 84  Q
    |||||||||||||||||||||||||||||||| | | ||||||||| |||||| |||||    
T  11256576 caaaatttgtatcaaatacatcaacatatgttaattcatttttgcttatattttgagac 11256634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 26104261 - 26104314
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||||||||||||||||||||||| | |||||  |||||||||| |||||||||    
T  26104261 atttagttcaaaatttgtatcaaacaaatcaatttatgttgactcatttttgct 26104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 47783121 - 47783181
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    |||| ||||||||||||||||| |||||||  | |||||||||| ||||||||| ||||||    
T  47783121 atttggttcaaaatttgtatcagatacatcggcttatgttgactcatttttgcttatattt 47783181  T

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Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 23971252 - 23971192
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    ||||||||||||||||||| ||||||||||||| ||| |||| | ||||||||| ||||||    
T  23971252 atttagttcaaaatttgtaccaaatacatcaacttatattgatttatttttgcttatattt 23971192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 27147664 - 27147604
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    |||||||| |||||||||||||||||||| ||| | ||||||||||||||| || ||||||    
T  27147664 atttagtttaaaatttgtatcaaatacattaacttttgttgactaatttttacttatattt 27147604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3769820 - 3769770
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    |||||||| ||||||||||| |||||||||||| | |||||||| ||||||    
T  3769820 atttagtttaaaatttgtattaaatacatcaacttgtgttgactcattttt 3769770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 14773519 - 14773580
Alignment:
Q  23 gttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatatttagagac 84  Q
    ||||||||||| ||||| |||||||||| || ||||||| |||||| || |||||| |||||    
T  14773519 gttcaaaatttatatcagatacatcaacttacgttgactcatttttacttatattttgagac 14773580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 15223971 - 15224032
Alignment:
Q  23 gttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatatttagagac 84  Q
    ||||||||||| ||||| |||||||||| || ||||||| |||||| || |||||| |||||    
T  15223971 gttcaaaatttatatcagatacatcaacttacgttgactcatttttacttatattttgagac 15224032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 94994 - 95039
Alignment:
Q  23 gttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  94994 gttcaaaatttgtaccaaatacatcaacttatgttgaccaattttt 95039  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 33557842 - 33557801
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttga 59  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  33557842 atttagttcaaaatttgtatcaaatacataaacttatgttga 33557801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 9548116 - 9548066
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    |||| ||||||||||||||  |||||||||||| |||||||||| ||||||    
T  9548116 atttggttcaaaatttgtactaaatacatcaacttatgttgactcattttt 9548066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 13210007 - 13210049
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgac 60  Q
    |||| ||||||||||||||||| |||||||||| |||||||||    
T  13210007 atttggttcaaaatttgtatcagatacatcaacttatgttgac 13210049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 35901095 - 35901042
Alignment:
Q  25 tcaaaatttgtatcaaatacatcaacatatgttgactaatttttgctcatattt 78  Q
    ||||||||||||  || ||||||||| |||||||||| ||||||||| ||||||    
T  35901095 tcaaaatttgtactaattacatcaacttatgttgactcatttttgcttatattt 35901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 37627971 - 37627927
Alignment:
Q  24 ttcaaaatttgtatcaaatacatcaacatatgttgactaattttt 68  Q
    ||||||||||||||||||||||||||| ||| || ||| ||||||    
T  37627971 ttcaaaatttgtatcaaatacatcaacttatattaacttattttt 37627927  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 5056355 - 5056318
Alignment:
Q  24 ttcaaaatttgtatcaaatacatcaacatatgttgact 61  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5056355 ttcaaaatttgtatcaaatacatcaacttatgttgact 5056318  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 31784778 - 31784831
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| ||||||||||||||| | |||||||||| ||||||||| ||||||||||    
T  31784778 attttgttcaaaatttgtattagatacatcaacttatgttgacaaatttttgct 31784831  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 37918981 - 37918928
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgactaatttttgct 71  Q
    |||| ||| ||||||| |||||||||||||||| |||||||| | |||||||||    
T  37918981 atttggtttaaaatttatatcaaatacatcaacttatgttgattcatttttgct 37918928  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 51288 - 51246
Alignment:
Q  18 atttagttcaaaatttgtatcaaatacatcaacatatgttgac 60  Q
    |||||||||||||||| || ||||||||||||| |||||||||    
T  51288 atttagttcaaaatttataccaaatacatcaacttatgttgac 51246  T

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