View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10906_low_1 (Length: 532)
Name: NF10906_low_1
Description: NF10906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10906_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 470; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 40 - 525
Target Start/End: Original strand, 32489633 - 32490118
Alignment:
| Q |
40 |
ctaaattctaaaatatctagctcgtttgatcttgatacaaacgctatttgatataatgattgagtgaatgcggaaaatttatgagtacattgaattgaag |
139 |
Q |
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| T |
32489633 |
ctaaactctaaaatatctagctcgtttgatcttgatacaaacgctatttgatataatgattgagtgaatgcggaaaatttatgagtacattgaattgaag |
32489732 |
T |
|
| Q |
140 |
tcttgactatgaaaccctacaatgataagagttgtttgtaaagcaaaagtagaggtagaagtagagaacattattagggcatgttggtgaaaagggtgca |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32489733 |
tcttgactatgaaaccctacaatgataagagttgtttgtaaagcaaaagtagaggtagaagtagagaacattattagggcatgttggtgaaaaggatgca |
32489832 |
T |
|
| Q |
240 |
tggtggtttattcatagtcggctaataaaccaagaagttgagtgtccaaataaataagcaagcatagaccataattatttgtacgttggcataattgtat |
339 |
Q |
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| T |
32489833 |
tggtggtttattcatagtcggctaataaaccaagaagttgagtgtacaaataaataagtaagcatagaccataattatttgtacgttggcataattgtat |
32489932 |
T |
|
| Q |
340 |
gtggtcccaactcaattagagtagcgtgtggtgattggagatgataacatggatcgatagggtttgtttctacctttagctcagagagtgtaggaaaggc |
439 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32489933 |
gtggtcccaactcaattagagtagcgtgtggtgattggagatgataacatggatcgatagggtttgtttctacctttagctcagagagtgtaggaaaggc |
32490032 |
T |
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| Q |
440 |
agtgtccgtgtctgtttatgtctatctttgagggtgcaatccaaagtgcgtgatcgacaggttggggtttctagttacttcatctc |
525 |
Q |
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| T |
32490033 |
agtgtccgtgtctgtttatgtctatctttgagggtgcaatccaaagtgcgtgatcgacaggttggggtttctagttacttcatctc |
32490118 |
T |
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