View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10909_low_4 (Length: 377)
Name: NF10909_low_4
Description: NF10909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10909_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 6467830 - 6468048
Alignment:
| Q |
18 |
ataagagttgtgagattatttaaagtttctacggtgaaattgaaataaatgaaaataaaatcatagcaaatcaatttaggaaaataagagtttttgtagg |
117 |
Q |
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| T |
6467830 |
ataagagttgtgagattatttaaagtttctgcggtgaaattgaaataaatgaaaataaaatcatagcaaatcaatttaggaaaataagagtttttgtagg |
6467929 |
T |
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| Q |
118 |
aggccgtaaggccactagtggaagattttgatttgcaaatctttatttcttgattttgtaagtgtgaccctttaattaatattacatacaataaattttt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
6467930 |
aggccgtaaggccactagtggaagattttgatttgcaaatctttatttcttgattttgtaagtgtgaccctttaattaatattacatacaat-aattttt |
6468028 |
T |
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| Q |
218 |
attccgtagataaaatgaga |
237 |
Q |
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| T |
6468029 |
tttccgtagataaaatgaga |
6468048 |
T |
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