View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1090_low_9 (Length: 426)
Name: NF1090_low_9
Description: NF1090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1090_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 90 - 398
Target Start/End: Original strand, 48167482 - 48167790
Alignment:
| Q |
90 |
catcatcatatagagggttgtgttgtccatagagatatcaaggtaagtgtgatgaagttaatctggaatggattctgcacttaattgggaatgattagaa |
189 |
Q |
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| T |
48167482 |
catcatcatatagagggttgtgttgtccatagagatatcaaggtaagtgtgatgaagttaatctggaatggattctgcacttaattgggaatgattagaa |
48167581 |
T |
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| Q |
190 |
aatgttttcttaatgccttgtattgattttattgtttagcttacaaacattcttttgactgagaaatatgaagccaaactgtcggattttggattgtcaa |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167582 |
aatgttttcttaatgccttgtattgattttattgtttagcttacaaacattcttttgactgagaaatatgaagccaaactgtcggattttggattgtcaa |
48167681 |
T |
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| Q |
290 |
ggatgatgggcatggaagagagcaaggtttttactgatgttagaggaactataggttacatggatccagagtacatgagtaatgccaagttaacttgtgc |
389 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167682 |
ggatgatgggcatggaagagagcaaggtttttactgatgttagaggaactataggttacatggatccagagtacatgagtaatgccaagttaacttgtgc |
48167781 |
T |
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| Q |
390 |
cagtgatgt |
398 |
Q |
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||||||||| |
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| T |
48167782 |
cagtgatgt |
48167790 |
T |
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