View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10910_high_9 (Length: 317)
Name: NF10910_high_9
Description: NF10910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10910_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 305
Target Start/End: Complemental strand, 33112524 - 33112234
Alignment:
| Q |
11 |
cacagataaccatataaatctacttttataaaatggtttaacaagattcacaaaattgggtgtggttcaatagacttctaagtttttacacaaatcatat |
110 |
Q |
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| T |
33112524 |
cacacataaccatataaatctacttttataaaatggtttaacaagattcacaaaattgggtgtggttcaatagacttctaagtttttacacaaatcatat |
33112425 |
T |
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| Q |
111 |
catattttcaaacatatgcatggtggacttggttatacttatacgtaacatggaggagattgtaaacgtcgtgctgtactctcataccattcatttataa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
33112424 |
catattttcaaacatatgcatggtggacttggttatacttatacgtaacatggaggaggttgtaaacgtcgtgctgtactctcataccattcatttataa |
33112325 |
T |
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| Q |
211 |
agtataaccaaatatgaacaaatgtatgtagaaaatgtaaatattacactacttcgcatggccatgttgcactcggataaagaataagtcataac |
305 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33112324 |
agtataaccaaatatgaacaaa----tgtagaaaatgtaaatattacactacttcgcatggccatgttgcactcggataaagaataggtcataac |
33112234 |
T |
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