View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10911_low_4 (Length: 423)

Name: NF10911_low_4
Description: NF10911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10911_low_4
NF10911_low_4
[»] chr4 (44 HSPs)
chr4 (15-327)||(32777869-32778181)
chr4 (270-330)||(28798457-28798517)
chr4 (270-386)||(19119143-19119256)
chr4 (271-330)||(45874055-45874114)
chr4 (272-346)||(40292668-40292742)
chr4 (270-330)||(12867840-12867900)
chr4 (274-330)||(22607988-22608044)
chr4 (270-330)||(53457823-53457883)
chr4 (268-386)||(18257326-18257456)
chr4 (271-327)||(19849575-19849631)
chr4 (270-386)||(1173950-1174078)
chr4 (327-386)||(12735499-12735558)
chr4 (271-330)||(22910326-22910385)
chr4 (271-330)||(22968137-22968196)
chr4 (271-330)||(23710402-23710461)
chr4 (271-330)||(34739280-34739339)
chr4 (280-323)||(37395633-37395676)
chr4 (271-330)||(54768501-54768560)
chr4 (271-330)||(55214652-55214711)
chr4 (268-330)||(11277979-11278041)
chr4 (256-349)||(31751859-31751952)
chr4 (334-386)||(26424859-26424911)
chr4 (334-386)||(34739355-34739407)
chr4 (334-386)||(43139907-43139959)
chr4 (334-386)||(45874130-45874182)
chr4 (334-386)||(53457899-53457951)
chr4 (271-330)||(2864817-2864876)
chr4 (344-386)||(23417484-23417524)
chr4 (279-330)||(23417552-23417603)
chr4 (271-330)||(26424927-26424985)
chr4 (271-314)||(32441169-32441212)
chr4 (271-330)||(43139975-43140034)
chr4 (336-386)||(12867918-12867968)
chr4 (332-386)||(55400301-55400355)
chr4 (334-386)||(238459-238511)
chr4 (270-314)||(238543-238587)
chr4 (274-330)||(2804525-2804581)
chr4 (270-314)||(12735430-12735474)
chr4 (334-386)||(28798389-28798441)
chr4 (271-319)||(37134048-37134096)
chr4 (272-328)||(41679375-41679431)
chr4 (271-327)||(51287601-51287657)
chr4 (334-386)||(54768433-54768485)
chr4 (334-386)||(55214727-55214779)
[»] chr6 (13 HSPs)
chr6 (271-386)||(35218641-35218756)
chr6 (271-330)||(24619148-24619207)
chr6 (271-323)||(4464127-4464179)
chr6 (327-386)||(16518491-16518548)
chr6 (270-386)||(28592129-28592245)
chr6 (270-330)||(33621493-33621553)
chr6 (271-330)||(33704216-33704275)
chr6 (287-327)||(5598847-5598887)
chr6 (271-329)||(21000692-21000750)
chr6 (271-332)||(7487331-7487392)
chr6 (334-386)||(21037365-21037417)
chr6 (271-323)||(28322932-28322984)
chr6 (334-386)||(33704291-33704343)
[»] chr2 (38 HSPs)
chr2 (271-386)||(42578180-42578295)
chr2 (270-386)||(34460368-34460496)
chr2 (270-330)||(11459714-11459774)
chr2 (269-329)||(11816621-11816681)
chr2 (270-386)||(19537306-19537434)
chr2 (268-330)||(10639675-10639737)
chr2 (269-330)||(39535603-39535664)
chr2 (271-330)||(26605624-26605683)
chr2 (271-330)||(33083623-33083682)
chr2 (271-330)||(40786278-40786337)
chr2 (271-329)||(23839859-23839917)
chr2 (332-386)||(45125166-45125220)
chr2 (268-325)||(6055079-6055136)
chr2 (287-332)||(8311345-8311390)
chr2 (334-386)||(10639607-10639659)
chr2 (270-330)||(11708677-11708737)
chr2 (270-330)||(19816219-19816279)
chr2 (334-386)||(23839934-23839986)
chr2 (334-386)||(29659219-29659271)
chr2 (334-386)||(33083555-33083607)
chr2 (271-319)||(34234530-34234578)
chr2 (334-386)||(37197611-37197663)
chr2 (274-330)||(38440266-38440322)
chr2 (271-330)||(15782590-15782649)
chr2 (274-333)||(34093240-34093299)
chr2 (269-326)||(7275959-7276017)
chr2 (275-329)||(25501853-25501907)
chr2 (275-329)||(42025674-42025728)
chr2 (270-328)||(45125236-45125294)
chr2 (271-316)||(9815879-9815924)
chr2 (327-384)||(11708746-11708803)
chr2 (334-386)||(21312280-21312330)
chr2 (269-314)||(29659303-29659348)
chr2 (344-384)||(43684156-43684194)
chr2 (270-310)||(13106355-13106395)
chr2 (271-323)||(19048754-19048806)
chr2 (334-386)||(26605699-26605751)
chr2 (271-327)||(45201944-45202000)
[»] chr5 (28 HSPs)
chr5 (271-386)||(32143415-32143530)
chr5 (269-329)||(11124650-11124710)
chr5 (271-386)||(17465091-17465204)
chr5 (271-330)||(13203957-13204016)
chr5 (270-329)||(40177623-40177682)
chr5 (268-330)||(27721428-27721490)
chr5 (270-327)||(1191612-1191669)
chr5 (270-330)||(2970983-2971043)
chr5 (269-325)||(3386974-3387030)
chr5 (272-332)||(4825006-4825066)
chr5 (270-322)||(35317774-35317826)
chr5 (271-330)||(21018223-21018282)
chr5 (280-330)||(3049123-3049173)
chr5 (271-329)||(21112049-21112107)
chr5 (272-309)||(9722164-9722201)
chr5 (334-386)||(13204032-13204084)
chr5 (334-386)||(21018298-21018350)
chr5 (334-386)||(29265950-29266002)
chr5 (334-386)||(31909386-31909438)
chr5 (334-386)||(35317698-35317750)
chr5 (344-386)||(12257443-12257483)
chr5 (344-386)||(23262631-23262671)
chr5 (275-329)||(8734000-8734054)
chr5 (271-327)||(2786271-2786327)
chr5 (334-386)||(2971059-2971111)
chr5 (334-386)||(4824940-4824992)
chr5 (274-330)||(6020995-6021051)
chr5 (272-328)||(17984813-17984869)
[»] chr7 (43 HSPs)
chr7 (271-377)||(34763454-34763560)
chr7 (274-330)||(8439081-8439137)
chr7 (270-331)||(25503999-25504060)
chr7 (270-330)||(44083939-44083999)
chr7 (270-329)||(28111001-28111060)
chr7 (272-322)||(23036280-23036330)
chr7 (275-329)||(43753824-43753878)
chr7 (334-386)||(7162791-7162841)
chr7 (266-322)||(11355818-11355874)
chr7 (277-329)||(27229548-27229600)
chr7 (271-327)||(29255717-29255773)
chr7 (270-329)||(25112317-25112376)
chr7 (270-325)||(27737944-27737999)
chr7 (271-330)||(40058238-40058297)
chr7 (269-332)||(43171006-43171069)
chr7 (270-332)||(32606397-32606459)
chr7 (272-330)||(47250320-47250378)
chr7 (270-323)||(3838607-3838660)
chr7 (334-386)||(42081620-42081670)
chr7 (271-328)||(46427360-46427417)
chr7 (270-330)||(2146635-2146695)
chr7 (334-386)||(4106813-4106865)
chr7 (334-386)||(4107384-4107436)
chr7 (270-330)||(23358184-23358244)
chr7 (334-386)||(23358260-23358312)
chr7 (270-330)||(25546344-25546404)
chr7 (269-329)||(27915651-27915711)
chr7 (334-386)||(31770533-31770585)
chr7 (270-330)||(31770601-31770661)
chr7 (334-386)||(38781209-38781261)
chr7 (334-386)||(40058313-40058365)
chr7 (271-330)||(4106738-4106797)
chr7 (344-386)||(19630669-19630709)
chr7 (344-386)||(47250252-47250292)
chr7 (344-386)||(47570719-47570759)
chr7 (271-333)||(7298191-7298253)
chr7 (272-322)||(42081693-42081743)
chr7 (334-384)||(44084015-44084065)
chr7 (334-386)||(2146711-2146763)
chr7 (334-386)||(8439153-8439205)
chr7 (271-319)||(18506355-18506403)
chr7 (334-386)||(25112248-25112300)
chr7 (334-386)||(41183890-41183942)
[»] chr1 (33 HSPs)
chr1 (269-330)||(45813080-45813141)
chr1 (270-330)||(41761480-41761540)
chr1 (271-386)||(192415-192542)
chr1 (272-330)||(5943682-5943740)
chr1 (271-386)||(41808202-41808329)
chr1 (271-330)||(28455874-28455933)
chr1 (274-329)||(29587255-29587310)
chr1 (271-330)||(32007074-32007133)
chr1 (271-386)||(13109770-13109897)
chr1 (266-328)||(34305708-34305770)
chr1 (287-329)||(47111473-47111515)
chr1 (293-330)||(7059489-7059526)
chr1 (270-327)||(39284289-39284346)
chr1 (334-386)||(5055789-5055841)
chr1 (271-330)||(26032798-26032860)
chr1 (334-386)||(28455949-28456001)
chr1 (334-386)||(32007149-32007201)
chr1 (334-386)||(41039304-41039356)
chr1 (334-386)||(45813012-45813064)
chr1 (270-322)||(48660021-48660073)
chr1 (271-330)||(5055857-5055916)
chr1 (271-330)||(11688263-11688322)
chr1 (327-386)||(35945865-35945924)
chr1 (344-386)||(48660109-48660149)
chr1 (271-328)||(2088976-2089033)
chr1 (271-328)||(3688307-3688364)
chr1 (269-314)||(46447462-46447507)
chr1 (334-386)||(20823-20875)
chr1 (271-323)||(29994459-29994511)
chr1 (287-327)||(39111950-39111990)
chr1 (278-330)||(39276357-39276409)
chr1 (334-386)||(39276425-39276477)
chr1 (334-386)||(41761412-41761464)
[»] chr3 (35 HSPs)
chr3 (270-330)||(55018103-55018163)
chr3 (269-386)||(28844502-28844632)
chr3 (271-329)||(43247720-43247778)
chr3 (275-329)||(47770329-47770383)
chr3 (270-330)||(7824523-7824583)
chr3 (270-330)||(29689551-29689611)
chr3 (271-323)||(42392881-42392933)
chr3 (271-330)||(1778851-1778910)
chr3 (271-330)||(4601425-4601484)
chr3 (271-330)||(54151750-54151809)
chr3 (271-329)||(51665995-51666053)
chr3 (271-386)||(54158266-54158393)
chr3 (270-327)||(28458662-28458719)
chr3 (271-332)||(41377584-41377645)
chr3 (287-327)||(448947-448987)
chr3 (334-386)||(7824455-7824507)
chr3 (334-386)||(29689483-29689535)
chr3 (271-327)||(35461551-35461607)
chr3 (334-386)||(43247651-43247703)
chr3 (271-327)||(50729524-50729580)
chr3 (271-327)||(50783269-50783325)
chr3 (271-323)||(52500838-52500890)
chr3 (334-386)||(54151682-54151734)
chr3 (344-386)||(3112996-3113036)
chr3 (284-327)||(9349748-9349791)
chr3 (344-386)||(51665926-51665966)
chr3 (344-386)||(55320401-55320441)
chr3 (332-386)||(4601498-4601552)
chr3 (271-309)||(7958569-7958607)
chr3 (334-384)||(9349679-9349729)
chr3 (271-321)||(40756806-40756856)
chr3 (272-322)||(51054702-51054752)
chr3 (333-386)||(52500912-52500965)
chr3 (282-330)||(8137700-8137748)
chr3 (334-386)||(36228995-36229047)
[»] chr8 (44 HSPs)
chr8 (334-386)||(10963243-10963293)
chr8 (270-330)||(6099571-6099631)
chr8 (271-323)||(39435282-39435334)
chr8 (271-330)||(70592-70651)
chr8 (271-386)||(12534721-12534846)
chr8 (268-327)||(22979601-22979660)
chr8 (271-330)||(35779566-35779625)
chr8 (269-330)||(42192708-42192769)
chr8 (270-330)||(1409-1469)
chr8 (270-330)||(3822395-3822455)
chr8 (275-327)||(18752345-18752397)
chr8 (270-330)||(28817255-28817315)
chr8 (270-330)||(29425356-29425416)
chr8 (270-330)||(32333113-32333173)
chr8 (271-327)||(41753052-41753108)
chr8 (271-330)||(6602587-6602646)
chr8 (271-330)||(6678040-6678099)
chr8 (271-330)||(40911221-40911280)
chr8 (286-328)||(7403765-7403807)
chr8 (269-327)||(41849303-41849361)
chr8 (334-386)||(1341-1393)
chr8 (334-386)||(70524-70576)
chr8 (334-386)||(1078649-1078701)
chr8 (334-386)||(6602519-6602571)
chr8 (334-386)||(6677972-6678024)
chr8 (344-387)||(9292105-9292146)
chr8 (271-387)||(20269542-20269658)
chr8 (271-387)||(21056171-21056287)
chr8 (334-386)||(32333189-32333241)
chr8 (334-386)||(35779498-35779550)
chr8 (271-330)||(9292018-9292077)
chr8 (344-386)||(42885261-42885301)
chr8 (334-384)||(7813397-7813447)
chr8 (270-328)||(18386707-18386765)
chr8 (336-386)||(28817333-28817383)
chr8 (270-328)||(39303308-39303366)
chr8 (336-386)||(42192640-42192690)
chr8 (271-332)||(1078715-1078776)
chr8 (269-330)||(4531051-4531112)
chr8 (271-328)||(7792661-7792718)
chr8 (270-315)||(31695353-31695398)
chr8 (334-386)||(2907090-2907141)
chr8 (334-386)||(13891165-13891217)
chr8 (268-328)||(45264711-45264770)
[»] scaffold0032 (2 HSPs)
scaffold0032 (271-330)||(56481-56540)
scaffold0032 (334-386)||(56556-56608)
[»] scaffold1348 (2 HSPs)
scaffold1348 (271-330)||(931-990)
scaffold1348 (334-386)||(863-915)
[»] scaffold0044 (2 HSPs)
scaffold0044 (271-330)||(10042-10101)
scaffold0044 (344-386)||(9974-10014)
[»] scaffold0067 (1 HSPs)
scaffold0067 (275-328)||(34822-34875)
[»] scaffold0360 (1 HSPs)
scaffold0360 (271-327)||(14495-14551)
[»] scaffold0119 (4 HSPs)
scaffold0119 (334-386)||(13952-14004)
scaffold0119 (334-386)||(19632-19684)
scaffold0119 (271-327)||(14023-14079)
scaffold0119 (271-327)||(19703-19759)
[»] scaffold0053 (2 HSPs)
scaffold0053 (282-330)||(22174-22222)
scaffold0053 (334-386)||(22238-22290)
[»] scaffold0038 (1 HSPs)
scaffold0038 (271-323)||(114252-114304)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 327
Target Start/End: Original strand, 32777869 - 32778181
Alignment:
Q  15 atgaaaaatttaaagttcaaaacgtgcttaatattcatgaaactaccaattgaactacacttatatgatatatcactattactatctcataaacacataa 114  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  32777869 atgaaaaatttagagttcaaaacgtgcttaatattcatgaaactaccaattgaactacacttacatgacatatcactataactatctcataaacacataa 32777968  T
Q  115 ttaatacaacatgttttataaatataccttatcagatttaacatag-nnnnnnnacaaaacatagttggaacttaaacaaattactaagaaaaatcataa 213  Q
    |||||||| |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  32777969 ttaatacagcatgttttataaatataccttatcagatttaacatagttttttttacaaaacatagttggaacttaaacaaattactaagaaaaatcataa 32778068  T
Q  214 atagnnnnnnnnnaaagaaaaaatcgtaaacaatgaatagtaaaaaagtatcataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaag 313  Q
    ||||         ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||  ||||||||||||    
T  32778069 atag-ttttttttaaagaaaaaatcgtaaataatgaatagtaaaaaagtatcataatgtctagaaatcatagatcaactgacaaataccaaaattgcaag 32778167  T
Q  314 gtcggacgtcgtga 327  Q
    ||||||||||||||    
T  32778168 gtcggacgtcgtga 32778181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 28798517 - 28798457
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| |||||||||||||||    
T  28798517 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgaccc 28798457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 270 - 386
Target Start/End: Original strand, 19119143 - 19119256
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt-tgtgtgagtttattttcacagtgga 368  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||| |||||||| ||| ||   |||||||||| |||||||||||| |||  ||||||     
T  19119143 tgtctagaagtcttagttcaactgataaatgtcaaaattacaaggccggacgtcatgatcc--gacctcacagtgtgtgtgagtttaattt--cagtggt 19119238  T
Q  369 ttaccacttcatctaaga 386  Q
    |||| ||| |||||||||    
T  19119239 ttactactccatctaaga 19119256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 45874055 - 45874114
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||    
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgaccc 45874114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 40292742 - 40292668
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttgt 346  Q
    ||||||||| |||  |||||||| |||||||||||||| ||||||||||||||| ||| ||||||||| ||||||    
T  40292742 tctagaagttctaactcaactgataaatgtcaaaattgtaaggtcggacgtcgtaacctagaacctcatagttgt 40292668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 12867840 - 12867900
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||| |||| ||||||| |||||| | |||||||||||||||||||||||||||    
T  12867840 tgtctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgaccc 12867900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 22607988 - 22608044
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||    
T  22607988 tagaagtcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgaccc 22608044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 53457823 - 53457883
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||||    
T  53457823 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc 53457883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 18257326 - 18257456
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga------------cccagaacctcacagttgt--gtgagtt 353  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||            ||| | |||||||||||||  |||||||    
T  18257326 aatgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtt 18257425  T
Q  354 tattttcacagtggattaccacttcatctaaga 386  Q
    ||||||  |||||||||||||||||||||||||    
T  18257426 tatttt--cagtggattaccacttcatctaaga 18257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 19849631 - 19849575
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||    
T  19849631 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtga 19849575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 386
Target Start/End: Original strand, 1173950 - 1174078
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc------------cagaacctcacagttgtgtg--agttta 355  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||||            | | ||||||||||||||||  ||||||    
T  1173950 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagttta 1174049  T
Q  356 ttttcacagtggattaccacttcatctaaga 386  Q
    ||||||  |||||||||||||||||||||||    
T  1174050 ttttca--gtggattaccacttcatctaaga 1174078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 12735499 - 12735558
Alignment:
Q  327 acccagaacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||| ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  12735499 acccaggacctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 12735558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 22910385 - 22910326
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||   | |||||||||||| ||| |||||||||||||||||||||||||||    
T  22910385 gtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgaccc 22910326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 22968137 - 22968196
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||   | |||||||||||| ||| |||||||||||||||||||||||||||    
T  22968137 gtctagaagtctccgctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgaccc 22968196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 23710461 - 23710402
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||| ||| |||||||  ||||||| ||||||||||| |||||||||||||||    
T  23710461 gtctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgaccc 23710402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 34739280 - 34739339
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  34739280 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 34739339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 37395633 - 37395676
Alignment:
Q  280 tcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  37395633 tcctagttcaacggacaaatttcaaaattgcaaggtcggacgtc 37395676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 54768560 - 54768501
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 54768501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 55214652 - 55214711
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||| ||  ||||||| |||||| ||||||||||||| |||||||||||||||    
T  55214652 gtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgaccc 55214711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 11277979 - 11278041
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| ||||| || ||||||    
T  11277979 aatgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgaccc 11278041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 31751952 - 31751859
Alignment:
Q  256 aaaaagtatcataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttgtgtg 349  Q
    |||||| | |||| ||| |||||||| |||||||||||| |||||   ||||| |||||  ||||||| ||| |||| ||||||||||||||||    
T  31751952 aaaaagaagcatattgtttagaagtcatagttcaactgataaatgctgaaattacaaggctggacgtcttgatccaggacctcacagttgtgtg 31751859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 26424911 - 26424859
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  26424911 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 26424859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 34739355 - 34739407
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  34739355 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 34739407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 43139959 - 43139907
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  43139959 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 43139907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 45874130 - 45874182
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  45874130 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 45874182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 53457899 - 53457951
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  53457899 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 53457951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 2864876 - 2864817
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||  ||||||| |||||| | |||||||||||  ||||||||||||||    
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgaccc 2864817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 23417524 - 23417484
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  23417524 tgtgtgagtttattttca--gtggattaccacttcatctaaga 23417484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 23417603 - 23417552
Alignment:
Q  279 gtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  23417603 gtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 23417552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 26424985 - 26424927
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  26424985 gtctagaagtcctagctcaactggcaaatgccgaaattgcaagg-cggacgtcatgaccc 26424927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 32441212 - 32441169
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 314  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  32441212 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaagg 32441169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 43140034 - 43139975
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 43139975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 12867918 - 12867968
Alignment:
Q  336 ctcacagttgtg--tgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  12867918 ctcacagttgtgagtgagtttattttca--gtggattaccacttcatctaaga 12867968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 55400301 - 55400355
Alignment:
Q  332 gaacctcacagttgt--gtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||| ||||||  |||||||||||||||  |||||||||||||||||||||||    
T  55400301 gaacctcatagttgtatgtgagtttattttca--gtggattaccacttcatctaaga 55400355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 238511 - 238459
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||| ||||    
T  238511 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatcgaaga 238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 238587 - 238543
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 314  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||    
T  238587 tgtctagaagtcctagctcaactgtcaaatgccgaaattgcaagg 238543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 2804525 - 2804581
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||| || | |||||||||||||  ||||||| |||||||||||| |||||||    
T  2804525 tagaagtcttaatccaactgacaaatgctaaaattgtaaggtcggacgttgtgaccc 2804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 12735430 - 12735474
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 314  Q
    ||||||||||| |||| |||||||||||||| |||||||| ||||    
T  12735430 tgtctagaagtactagctcaactgacaaatgccaaaattgtaagg 12735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 28798441 - 28798389
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    |||| |||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28798441 accttacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 28798389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 37134048 - 37134096
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcgga 319  Q
    ||||||||||||||||||||||| ||||||   ||||| ||||||||||    
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcgga 37134096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 41679375 - 41679431
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||| |||| |||| ||||||||||||||   ||||| |||||||||||||||||||    
T  41679375 tctaaaagttctagctcaactgacaaatgctgaaattacaaggtcggacgtcgtgac 41679431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 51287601 - 51287657
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||  || ||| |||||||||| |||||||| |||||| ||||||||||    
T  51287601 gtctagaagtcacagctcagctgacaaatgccaaaattgtaaggtcagacgtcgtga 51287657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 54768485 - 54768433
Alignment:
Q  334 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||| |  | ||||  |||||||||||||||||||||||||    
T  54768485 acctcacagttgtgtgcgagttttttttcagtggattaccacttcatctaaga 54768433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 55214727 - 55214779
Alignment:
Q  334 acctcacagttgtgt--gagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||  |||||||||||||  |||||||||||||| ||||||||    
T  55214727 acctcacagttgtgtatgagtttattttca--gtggattaccactttatctaaga 55214779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 386
Target Start/End: Complemental strand, 35218756 - 35218641
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttg--tgtgagtttattttcacagtgga 368  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||||| | ||||||||||||  ||||||||||||||  |||||||    
T  35218756 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggacctcacagttgtgtgtgagtttatttt--cagtgga 35218659  T
Q  369 ttaccacttcatctaaga 386  Q
    ||||||||||||||||||    
T  35218658 ttaccacttcatctaaga 35218641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 24619207 - 24619148
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||  ||||||||||||||||||||||| |||| || ||||||||||||    
T  24619207 gtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgaccc 24619148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 4464127 - 4464179
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||    
T  4464127 gtctagaagttctagttcaactgacaaatgccgaaattgcaaggccggacgtc 4464179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 16518491 - 16518548
Alignment:
Q  327 acccagaacctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||| | ||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  16518491 acccaggagctcacagttgtgtgagtttatttt--cagtggattaccatttcatctaaga 16518548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 386
Target Start/End: Complemental strand, 28592245 - 28592129
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttg--tgtgagtttattttcacagtgg 367  Q
    |||||||||||||||| | ||||| |||||| | |||||  ||||  |||||| ||||||||  ||||||||||||  ||||||||||||||  || |||    
T  28592245 tgtctagaagtcctagcttaactggcaaatgccgaaattataaggctggacgttgtgacccaagacctcacagttgtgtgtgagtttatttt--caatgg 28592148  T
Q  368 attaccacttcatctaaga 386  Q
    ||||||| || ||||||||    
T  28592147 attaccaatttatctaaga 28592129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 33621493 - 33621553
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  33621493 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 33621553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 33704216 - 33704275
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 33704275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 5598887 - 5598847
Alignment:
Q  287 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  5598887 tcaactgacaaatgtcaaaattgcaaggccagacgtcgtga 5598847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 21000692 - 21000750
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| || ||||| |||||    
T  21000692 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacc 21000750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 7487392 - 7487331
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    ||||||||||||||| ||||| | |||||||| ||||| |||| |||| |||||||| ||||    
T  7487392 gtctagaagtcctagatcaaccggcaaatgtcgaaattacaagatcgggcgtcgtgagccag 7487331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 21037365 - 21037417
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  ||| |||||||||||||||||||    
T  21037365 acctcacagttgtgtgtgagtttattttca--gtgaattaccacttcatctaaga 21037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 28322932 - 28322984
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||||    
T  28322932 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtc 28322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 33704291 - 33704343
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  ||||||||||||||||| |||||    
T  33704291 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatttaaga 33704343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 42578180 - 42578295
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 368  Q
    ||||||||||||||| ||||||| |||||| | |||||||||||||||||||| |||||| | ||||||||||  ||||||||||||||||  |||||||    
T  42578180 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccggtacctcacagttgtgtgtgagtttatttt--cagtgga 42578277  T
Q  369 ttaccacttcatctaaga 386  Q
    ||||||||||||||||||    
T  42578278 ttaccacttcatctaaga 42578295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 386
Target Start/End: Original strand, 34460368 - 34460496
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagttta 355  Q
    |||||||||||||||| |||||||||||||| | ||||||||||| ||||||| |||            |||||||||||||||||  ||||||||||||    
T  34460368 tgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagttta 34460467  T
Q  356 ttttcacagtggattaccacttcatctaaga 386  Q
    ||||  |||||||||||||||||||||||||    
T  34460468 tttt--cagtggattaccacttcatctaaga 34460496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 11459714 - 11459774
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||||    
T  11459714 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc 11459774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 11816681 - 11816621
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||| ||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||    
T  11816681 atgtccagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacc 11816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 386
Target Start/End: Original strand, 19537306 - 19537434
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagttgtgtgagtttatt 357  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||            |||| |||||||||||||||||| || | |     
T  19537306 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgttta 19537405  T
Q  358 ttcacagtggattaccacttcatctaaga 386  Q
    ||  |||||||||||||||||||||||||    
T  19537406 ttttcagtggattaccacttcatctaaga 19537434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 10639737 - 10639675
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  10639737 aatgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 10639675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 39535664 - 39535603
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||    
T  39535664 atgtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgaccc 39535603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 26605624 - 26605683
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 26605683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 33083682 - 33083623
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 33083623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 40786337 - 40786278
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||| ||  |||||||||||||| | ||||||||||| |||||||||||||||    
T  40786337 gtctagaagtcataactcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccc 40786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 23839859 - 23839917
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||  ||||||| |||||| ||||||||||||| ||||||| ||||||    
T  23839859 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 23839917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 45125220 - 45125166
Alignment:
Q  332 gaacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  45125220 gaacctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 45125166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 6055136 - 6055079
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgt 325  Q
    |||| ||||| ||||||| |||| ||||||||| |||||||||||||||| |||||||    
T  6055136 aatggctagatgtcctagctcaattgacaaatgccaaaattgcaaggtcgaacgtcgt 6055079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 8311345 - 8311390
Alignment:
Q  287 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||    
T  8311345 tcaactgacaaatgtcaaaattgcaagatcggacatcatgacccag 8311390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 10639659 - 10639607
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  10639659 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 10639607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 11708677 - 11708737
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | |||||| |||| ||||||| |||||||    
T  11708677 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgaccc 11708737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 19816219 - 19816279
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||  | ||||||||||| ||||||| |||||||    
T  19816219 tgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgaccc 19816279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 23839934 - 23839986
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  23839934 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 23839986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 29659271 - 29659219
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  29659271 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 29659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 33083607 - 33083555
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  33083607 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 33083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 34234530 - 34234578
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcgga 319  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||    
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcgga 34234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 37197663 - 37197611
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  37197663 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 37197611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 38440322 - 38440266
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||| | || |||||||||||||| | ||||||||||| |||||||||||||||    
T  38440322 tagaagttccagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccc 38440266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 15782590 - 15782649
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||| ||||||||| |||| ||||||||| | |||||| ||||||||||||| ||||||    
T  15782590 gtctaaaagtcctagctcaattgacaaatgccgaaattgtaaggtcggacgtcatgaccc 15782649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 34093240 - 34093299
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccaga 333  Q
    |||||||  ||| ||||||||||||||||||||||  |||||||||||| |||| |||||    
T  34093240 tagaagttatagctcaactgacaaatgtcaaaattttaaggtcggacgttgtgatccaga 34093299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 7276017 - 7275959
Alignment:
Q  269 atgtctagaagtcctagttcaactgac-aaatgtcaaaattgcaaggtcggacgtcgtg 326  Q
    ||||||||||||||||  ||||||||| ||||| | |||||||||||||||| ||||||    
T  7276017 atgtctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtg 7275959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 25501907 - 25501853
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||| ||||||| ||||||   ||||||||||| ||||||||||||||    
T  25501907 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacc 25501853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 42025674 - 42025728
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||| |||||||||||||||| |||||  |||| |||| |||||||||    
T  42025674 agaagtcctagctcaactgacaaatgtcgaaattttaaggccggatgtcgtgacc 42025728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 328
Target Start/End: Complemental strand, 45125294 - 45125236
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||||||||||||||| ||||||| |||||| | |||||| |||| ||||||| |||||    
T  45125294 tgtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgac 45125236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 9815924 - 9815879
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtc 316  Q
    |||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  9815924 gtctagaagttctagctcaactgacaaatatcaaaattgtaaggtc 9815879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 11708746 - 11708803
Alignment:
Q  327 acccagaacctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaa 384  Q
    |||||| |||||||||||||||| |  ||||||||||  |||||||||||||||||||||    
T  11708746 acccaggacctcacagttgtgtgtgggtttattttca--gtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 21312280 - 21312330
Alignment:
Q  334 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||| |||||||||||||||||   |||| |||||||||||||||||||    
T  21312280 acctcacaattgtgtgagtttatttt--tagtgaattaccacttcatctaaga 21312330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 29659348 - 29659303
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 314  Q
    ||||||||||||||||| ||||||| |||||| |||||||| ||||    
T  29659348 atgtctagaagtcctagctcaactggcaaatgccaaaattgtaagg 29659303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 43684156 - 43684194
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaa 384  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  43684156 tgtgtgagtttattttcac--tggattaccacttcatctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 13106355 - 13106395
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgc 310  Q
    |||||||||||||||| |||||||  |||||||||||||||    
T  13106355 tgtctagaagtcctagctcaactggtaaatgtcaaaattgc 13106395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 19048754 - 19048806
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||||    
T  19048754 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtc 19048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 26605699 - 26605751
Alignment:
Q  334 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  26605699 acctcacagttgtgtgtgaatttattttca--gtggattaccacttcatctaaga 26605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 45202000 - 45201944
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||||||||||||  |||| || |||||||| |||||| |||||||| ||||||||    
T  45202000 gtctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtga 45201944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 8e-28; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 271 - 386
Target Start/End: Complemental strand, 32143530 - 32143415
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttg--tgtgagtttattttcacagtgga 368  Q
    ||||||||||| ||| ||||||| |||||| ||||||||||||| ||||||| ||||||| | ||||||||||||  ||||||||||||||  |||||||    
T  32143530 gtctagaagtcatagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggacctcacagttgtgtgtgagtttatttt--cagtgga 32143433  T
Q  369 ttaccacttcatctaaga 386  Q
    ||||||||||||||||||    
T  32143432 ttaccacttcatctaaga 32143415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 11124650 - 11124710
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  11124650 atgtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacc 11124710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 17465091 - 17465204
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagttgtgtgagtttattttcacagtggatt 370  Q
    ||||| ||||||||| ||| ||  |||||| | |||||||||||  ||||||| |||||| | |||||||| || ||| |||||| |||  |||||||||    
T  17465091 gtctaaaagtcctagctcagctagcaaatgccgaaattgcaaggctggacgtcatgacccgggacctcacaattttgtaagtttaattt--cagtggatt 17465188  T
Q  371 accacttcatctaaga 386  Q
    ||||||||||||||||    
T  17465189 accacttcatctaaga 17465204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 13203957 - 13204016
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||||||||    
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgaccc 13204016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 40177623 - 40177682
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    |||||||||||||||| | |||||||||||||| ||||||||||| ||||||| ||||||    
T  40177623 tgtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacc 40177682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 27721428 - 27721490
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||| |||||||  ||||| | ||||||||| |||||||||||||||||    
T  27721428 aatgtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgaccc 27721490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 1191669 - 1191612
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||    
T  1191669 tgtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtga 1191612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 2970983 - 2971043
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| |||||||| ||||||| |||||| |||||| ||||| |||||||    
T  2970983 tgtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgaccc 2971043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 3387030 - 3386974
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgt 325  Q
    ||||||| ||||||||||||||||| |||||| | ||||||||||| ||||||||||    
T  3387030 atgtctaaaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgt 3386974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 332
Target Start/End: Complemental strand, 4825066 - 4825006
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    |||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||||    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccag 4825006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 322
Target Start/End: Complemental strand, 35317826 - 35317774
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 322  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||||||||    
T  35317826 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgt 35317774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 21018223 - 21018282
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| ||||||||| ||| ||||||| |||||||    
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgaccc 21018282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 3049173 - 3049123
Alignment:
Q  280 tcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| ||||||||    
T  3049173 tcctagttcaactcacaaatgccaaaattgcaaggccggacgccgtgaccc 3049123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 21112049 - 21112107
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| |  |||||||||||    
T  21112049 gtctagaagtcctagctcagctgacaaatgtcgaaattgcaaggacatacgtcgtgacc 21112107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 9722201 - 9722164
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattg 309  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9722201 tctagaagtcctagttcaactgacaaatgccaaaattg 9722164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 13204032 - 13204084
Alignment:
Q  334 acctcacagtt--gtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||  |||||||||||||||||  |||||||||||||||||||||||    
T  13204032 acctcacagttatgtgtgagtttattttca--gtggattaccacttcatctaaga 13204084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 21018298 - 21018350
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  21018298 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 21018350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 29265950 - 29266002
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  29265950 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 29266002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 31909438 - 31909386
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  31909438 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 31909386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 35317750 - 35317698
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  35317750 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 35317698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Original strand, 12257443 - 12257483
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  12257443 tgtgtgagtttattttca--gtggattaccacttcatctaaga 12257483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Original strand, 23262631 - 23262671
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  23262631 tgtgtgagtttattttca--gtggattaccacttcatctaaga 23262671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 8734000 - 8734054
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||| ||||||| ||||||   ||||||||||| ||||||||||||||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacc 8734054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 2786271 - 2786327
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||| ||||| || |||||| | |||||| ||||||||||| |||||    
T  2786271 gtctagaagtcctaattcaattggcaaatgccgaaattgtaaggtcggacgccgtga 2786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 2971059 - 2971111
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  |||||||||||   |||||||||||||||||||||||    
T  2971059 acctcacagttgtgtgtgagtttattttcg--gtggattaccacttcatctaaga 2971111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 4824992 - 4824940
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||   ||||||||||||||||||||||    
T  4824992 acctcacagttgtgtgtgagtttattttcaa--tggattaccacttcatctaaga 4824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 6020995 - 6021051
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||  |||| || |||||||||||||||||||| | ||||| |||||||    
T  6020995 tagaagtcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgaccc 6021051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 17984869 - 17984813
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||||||||||||| |||||||| ||| ||| |||||||||| | ||||||| ||||    
T  17984869 tctagaagtcctagctcaactgaaaaaggtcgaaattgcaagattggacgtcctgac 17984813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 377
Target Start/End: Original strand, 34763454 - 34763560
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 368  Q
    ||||||||||||||| |||||||  ||||||| ||||||||||| ||||||||||||||| | ||||||||||  |||||||||||| |||  |||||||    
T  34763454 gtctagaagtcctagctcaactggaaaatgtcgaaattgcaagggcggacgtcgtgacccgggacctcacagttgtgtgtgagtttaattt--cagtgga 34763551  T
Q  369 ttaccactt 377  Q
    |||||||||    
T  34763552 ttaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 8439081 - 8439137
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgaccc 8439137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 25504060 - 25503999
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccca 331  Q
    |||||||||||  |||||||||||||||||||||||||||||| | |||||||||| |||||    
T  25504060 tgtctagaagttttagttcaactgacaaatgtcaaaattgcaaagccggacgtcgtaaccca 25503999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 44083939 - 44083999
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  44083939 tgtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 44083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 28111060 - 28111001
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    |||||||||||| ||  |||||||||||||||| |||||||||| |||||||||||||||    
T  28111060 tgtctagaagtcttaactcaactgacaaatgtcgaaattgcaagatcggacgtcgtgacc 28111001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 23036330 - 23036280
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 322  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  23036330 tctaaaagtcctagttcaactgacaaatgtcaaaattataaggtcggacgt 23036280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 43753878 - 43753824
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacc 43753824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 7162841 - 7162791
Alignment:
Q  334 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  7162841 acctcacaattgtgtgagtttattttca--gtggattaccacttcatctaaga 7162791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 11355818 - 11355874
Alignment:
Q  266 ataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 322  Q
    |||| |||||||||| ||||||||||| ||||||| | |||||||||||||||||||    
T  11355818 ataaagtctagaagttctagttcaactaacaaatgccgaaattgcaaggtcggacgt 11355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 329
Target Start/End: Complemental strand, 27229600 - 27229548
Alignment:
Q  277 aagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||||||||||||    
T  27229600 aagtcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacc 27229548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 29255717 - 29255773
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||| |||| ||||||| |||||| |||||||||||||| |||||||||||    
T  29255717 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtga 29255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 25112376 - 25112317
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    |||||||||||||||| ||||||| |||||  | |||||||||||||||||||| |||||    
T  25112376 tgtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacc 25112317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 27737999 - 27737944
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgt 325  Q
    |||||| ||||||||  ||||||||||||| |||||||||||||||||||| ||||    
T  27737999 tgtctataagtcctaactcaactgacaaatatcaaaattgcaaggtcggacatcgt 27737944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 40058238 - 40058297
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||  ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  40058238 gtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 40058297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 43171069 - 43171006
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    ||||||| ||||||||  |||||||||||||| | ||||||||||| |||||||||| ||||||    
T  43171069 atgtctataagtcctaactcaactgacaaatgccgaaattgcaaggccggacgtcgtaacccag 43171006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 32606459 - 32606397
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    ||||||||||| |||  |||||||||||||  | ||||||||||| |||||||||||||||||    
T  32606459 tgtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccag 32606397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 47250378 - 47250320
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 47250320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 3838607 - 3838660
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    |||||| ||||  ||||| ||||||||||||||||||||||||||||| |||||    
T  3838607 tgtctataagtattagtttaactgacaaatgtcaaaattgcaaggtcgaacgtc 3838660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 42081670 - 42081620
Alignment:
Q  334 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  42081670 acctcacagttgtgtgagtttatttt--cagtgaattaccactttatctaaga 42081620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 46427360 - 46427417
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    ||||| |||| |||| ||||||||||||| ||||||||||||||| ||||||| ||||    
T  46427360 gtctaaaagttctagctcaactgacaaatatcaaaattgcaaggttggacgtcatgac 46427417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 2146635 - 2146695
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| |||||||  ||||| | ||||||||||| ||||||| |||||||    
T  2146635 tgtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgaccc 2146695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 4106813 - 4106865
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  4106813 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 4106865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 4107384 - 4107436
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  4107384 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 4107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 23358184 - 23358244
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||  | ||||||||||| |||||||||| ||||    
T  23358184 tgtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaaccc 23358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 23358260 - 23358312
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  23358260 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 23358312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 25546404 - 25546344
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| |||||||  ||||| | ||||||||||| |||||||| ||||||    
T  25546404 tgtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgaccc 25546344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 27915711 - 27915651
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||||  |||||||  |||||   ||||||||||||||||||||||||||    
T  27915711 atgtctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgacc 27915651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 31770585 - 31770533
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  31770585 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 31770533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 31770661 - 31770601
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||| ||| ||||||    
T  31770661 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgaccc 31770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 38781261 - 38781209
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  38781261 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 38781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 40058313 - 40058365
Alignment:
Q  334 acctcacagttgtgt--gagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  40058313 acctcacagttgtgtatgagtttattttca--gtggattaccacttcatctaaga 40058365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 4106738 - 4106797
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||  |||||| |||||| | ||||||||||| |||||||| ||||||    
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 4106797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 19630709 - 19630669
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  19630709 tgtgtgagtttattttca--gtggattaccacttcatctaaga 19630669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 47250292 - 47250252
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  47250292 tgtgtgagtttattttca--gtggattaccacttcatctaaga 47250252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 47570759 - 47570719
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  47570759 tgtgtgagtttattttca--gtggattaccacttcatctaaga 47570719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 7298253 - 7298191
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccaga 333  Q
    ||||||||||  ||| |||||||| ||||| |||||||  ||||||||| |||||||||||||    
T  7298253 gtctagaagttatagctcaactgataaatgccaaaattataaggtcggatgtcgtgacccaga 7298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 42081743 - 42081693
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 322  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| ||| ||||    
T  42081743 tctagaagtcctagctcagctggcaaatgtcaaaattgcaagatcgaacgt 42081693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 44084015 - 44084065
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaa 384  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  44084015 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 2146711 - 2146763
Alignment:
Q  334 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  2146711 acctcacagttgtgtgtgggtttattttca--gtggattaccacttcatctaaga 2146763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 8439153 - 8439205
Alignment:
Q  334 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  8439153 acctcacagttgtgtgtgaatttattttca--gtggattaccacttcatctaaga 8439205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 18506403 - 18506355
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcgga 319  Q
    |||||||||||||||  ||||| | |||||| |||||||||||||||||    
T  18506403 gtctagaagtcctagcacaactaaaaaatgttaaaattgcaaggtcgga 18506355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 25112300 - 25112248
Alignment:
Q  334 acctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  25112300 acctcacagttgtgtgtgggtttattttca--gtggattaccacttcatctaaga 25112248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 41183890 - 41183942
Alignment:
Q  334 acctcacagtt--gtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||  |||||||||||||||||  |||||||| ||||||||||||||    
T  41183890 acctcacagttatgtgtgagtttattttca--gtggattatcacttcatctaaga 41183942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 45813141 - 45813080
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||    
T  45813141 atgtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgaccc 45813080  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 41761540 - 41761480
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||||||    
T  41761540 tgtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 41761480  T

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Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 192415 - 192542
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagtttat 356  Q
    ||||||||||||||| ||||||||||||||  |||||||||||| ||||||| |||            |||||| ||||||||||  |||||||||||||    
T  192415 gtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtttat 192514  T
Q  357 tttcacagtggattaccacttcatctaaga 386  Q
    |||  ||| |||||||||||||||||||||    
T  192515 ttt--cagcggattaccacttcatctaaga 192542  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 5943682 - 5943740
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||| |||||| |||||||||||||| | ||||||||||| |||||||||||||||    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccc 5943740  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 41808202 - 41808329
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagtttat 356  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||            |||| ||||||||||||  |||||||||||||    
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 41808301  T
Q  357 tttcacagtggattaccacttcatctaaga 386  Q
    |||  |||||||||||||||||||||||||    
T  41808302 ttt--cagtggattaccacttcatctaaga 41808329  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 28455874 - 28455933
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  28455874 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 28455933  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 29587255 - 29587310
Alignment:
Q  274 tagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    |||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacc 29587310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 32007074 - 32007133
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  32007074 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 32007133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 13109770 - 13109897
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc------------agaacctcacagt--tgtgtgagtttat 356  Q
    |||||||||| |||| | ||||||||||||   |||||||||||||||||||||| ||||            |||||||||||||  ||||||||||||     
T  13109770 gtctagaagttctagcttaactgacaaatgattaaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagtttaa 13109869  T
Q  357 tttcacagtggattaccacttcatctaaga 386  Q
    |||  |||||||||||||||||||||||||    
T  13109870 ttt--cagtggattaccacttcatctaaga 13109897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 328
Target Start/End: Complemental strand, 34305770 - 34305708
Alignment:
Q  266 ataatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||| ||||| ||||||||| ||||| || ||||||||||||| ||||| |||||||||||||    
T  34305770 ataacgtctaaaagtcctagctcaaccgataaatgtcaaaatttcaaggccggacgtcgtgac 34305708  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 47111473 - 47111515
Alignment:
Q  287 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  47111473 tcaactgacaaatgccgaaattgcaaggtcggacgtcgtgacc 47111515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 7059489 - 7059526
Alignment:
Q  293 gacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7059489 gacaaatgtcaaaattgcaaggtcagacgtcgtgaccc 7059526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 39284289 - 39284346
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||| ||| ||||||||| |||||  |||||| |||||||||||||||||    
T  39284289 tgtctagaagtcatagctcaactgacgaatgttgaaattgtaaggtcggacgtcgtga 39284346  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 5055841 - 5055789
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  5055841 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 5055789  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 26032798 - 26032860
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggt---cggacgtcgtgaccc 330  Q
    |||||||||||||| ||||||||||||||| | |||||| |||||   |||||||||||||||    
T  26032798 gtctagaagtcctaattcaactgacaaatgccgaaattgtaaggtcggcggacgtcgtgaccc 26032860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 28455949 - 28456001
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28455949 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 28456001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 32007149 - 32007201
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  32007149 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 32007201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 41039356 - 41039304
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  41039356 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 41039304  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 45813064 - 45813012
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  45813064 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 45813012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 48660021 - 48660073
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 322  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||    
T  48660021 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgt 48660073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 5055916 - 5055857
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||| ||| |||||| | ||||||||||| |||||||| ||||||    
T  5055916 gtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgaccc 5055857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 11688263 - 11688322
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||||||||| || ||||||||||  || |||| |||||||    
T  11688263 gtctagaagtcctagctcaactgacaaatatcgaaattgcaagcccgaacgttgtgaccc 11688322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 35945865 - 35945924
Alignment:
Q  327 acccagaacctcacagttgtgtgag--tttattttcacagtggattaccacttcatctaaga 386  Q
    |||| |||||||||||||||||| |  ||||||||||  |||||||||||||||||||||||    
T  35945865 acccggaacctcacagttgtgtgtgaatttattttca--gtggattaccacttcatctaaga 35945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Original strand, 48660109 - 48660149
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  48660109 tgtgtgagtttattttca--gtggattaccacttcatctaaga 48660149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 2089033 - 2088976
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    ||||||||||||||| ||||||| ||||| || |||||| |||||| ||| |||||||    
T  2089033 gtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgac 2088976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 328
Target Start/End: Complemental strand, 3688364 - 3688307
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    ||||| || ||||||||||||||||||||  |||||||||||||  |||||| |||||    
T  3688364 gtctaaaaatcctagttcaactgacaaattccaaaattgcaaggaaggacgttgtgac 3688307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 46447507 - 46447462
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaagg 314  Q
    |||||||||||| |||||||||||| |||||| | |||||||||||    
T  46447507 atgtctagaagttctagttcaactggcaaatgccgaaattgcaagg 46447462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 20823 - 20875
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  |||||||||| |  |||||||||||||||||||||||    
T  20823 acctcacagttgtgtgtgagtttattttta--gtggattaccacttcatctaaga 20875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 29994511 - 29994459
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| | ||||||    
T  29994511 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtc 29994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 39111950 - 39111990
Alignment:
Q  287 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  39111950 tcaactgacaaatgtcgaaattgcaaggccggatgtcgtga 39111990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 39276357 - 39276409
Alignment:
Q  278 agtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  39276357 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 39276409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 39276425 - 39276477
Alignment:
Q  334 acctcacagtt--gtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||| |||||    
T  39276425 acctcacagttatgtgtgagtttattttca--gtggattaccacttcatttaaga 39276477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 41761464 - 41761412
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||| ||||    
T  41761464 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatccaaga 41761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 55018163 - 55018103
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||||    
T  55018163 tgtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccc 55018103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 386
Target Start/End: Original strand, 28844502 - 28844632
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc------------agaacctcacagt--tgtgtgagttt 354  Q
    |||||||||||| |||| |||||||||||||| | ||||||||||| ||||||| |||||||             ||||||||||||  |||||||||||    
T  28844502 atgtctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagttt 28844601  T
Q  355 attttcacagtggattaccacttcatctaaga 386  Q
    |||||  |||||||||||||||||||||||||    
T  28844602 atttt-tcagtggattaccacttcatctaaga 28844632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 43247778 - 43247720
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||||    
T  43247778 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacc 43247720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 47770329 - 47770383
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||| |||||||| ||||||| |||||||||| |||||||||||||||    
T  47770329 agaagtcctagctcaactgataaatgtcgaaattgcaagctcggacgtcgtgacc 47770383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 7824583 - 7824523
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  7824583 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 7824523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 29689611 - 29689551
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  29689611 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 29689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 42392933 - 42392881
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  42392933 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtc 42392881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 1778851 - 1778910
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| |||||||||||||| | ||||||||||| ||||| | |||||||    
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgaccc 1778910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 4601425 - 4601484
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  4601425 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 4601484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 54151809 - 54151750
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 54151750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 329
Target Start/End: Complemental strand, 51666053 - 51665995
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacc 329  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| |||||    
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacc 51665995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 54158266 - 54158393
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagt--tgtgtgagtttat 356  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||            |||| | ||||||||||  |||||||||||||    
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 54158365  T
Q  357 tttcacagtggattaccacttcatctaaga 386  Q
    |||  |||||||||||||||||||||||||    
T  54158366 ttt--cagtggattaccacttcatctaaga 54158393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 28458662 - 28458719
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||||  |||||||||||||||| ||||||||||| | || |||||||    
T  28458662 tgtctagaagtcctaactcaactgacaaatgtcgaaattgcaaggccagatgtcgtga 28458719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 41377584 - 41377645
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    ||||||||||||||| ||||||| |||||| |||||||| |||| |||||||| ||| ||||    
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccag 41377645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 448987 - 448947
Alignment:
Q  287 tcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  448987 tcaactgacaaatgtcaaaattgtaaggccggacgtcgtga 448947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 7824507 - 7824455
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  7824507 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 7824455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 29689535 - 29689483
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  29689535 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 29689483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 35461607 - 35461551
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||||||||||| ||||    
T  35461607 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtga 35461551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 43247703 - 43247651
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  43247703 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 43247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 50729524 - 50729580
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||| |||| |||||||||||||| | |||||| |||||| ||||||||||    
T  50729524 gtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtga 50729580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 50783325 - 50783269
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||| |||| |||||||||||||| | |||||| |||||| ||||||||||    
T  50783325 gtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtga 50783269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 52500838 - 52500890
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    ||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||    
T  52500838 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtc 52500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 54151734 - 54151682
Alignment:
Q  334 acctcacagttgtgt--gagtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  54151734 acctcacagttgtgtatgagtttattttca--gtggattaccacttcatctaaga 54151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 3113036 - 3112996
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  3113036 tgtgtgagtttattttca--gtggattaccacttcatctaaga 3112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 9349791 - 9349748
Alignment:
Q  284 agttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||| |||||| | ||||||||||||||||||||||||    
T  9349791 agttcaactggcaaatgccgaaattgcaaggtcggacgtcgtga 9349748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 51665966 - 51665926
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  51665966 tgtgtgagtttattttca--gtggattaccacttcatctaaga 51665926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 55320441 - 55320401
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  55320441 tgtgtgagtttattttca--gtggattaccacttcatctaaga 55320401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 4601498 - 4601552
Alignment:
Q  332 gaacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  ||||||||||||  ||||||||||| |||||||||||    
T  4601498 gaacctcacagttgtgtgtgagtttattttca--gtggattaccagttcatctaaga 4601552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 7958569 - 7958607
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattg 309  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  7958569 gtctagaagtcctacctcaactgacaaatgtcaaaattg 7958607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 9349729 - 9349679
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaa 384  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  9349729 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 40756856 - 40756806
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacg 321  Q
    ||||||||||||||  |||||||| ||||| ||||||||||||||| ||||    
T  40756856 gtctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacg 40756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 51054702 - 51054752
Alignment:
Q  272 tctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgt 322  Q
    |||||||||||||  |||||||||||||||| ||||| |||||||| ||||    
T  51054702 tctagaagtcctaactcaactgacaaatgtcgaaattacaaggtcgaacgt 51054752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 52500912 - 52500965
Alignment:
Q  333 aacctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    |||||||||||||||||  ||||||||||||  || ||||||||||||||||||||    
T  52500912 aacctcacagttgtgtgtgagtttattttca--gtagattaccacttcatctaaga 52500965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 8137748 - 8137700
Alignment:
Q  282 ctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||| |||||| |||||||  ||||||||||||||||||||| ||||||    
T  8137748 ctagctcaactaacaaatgcaaaaattgcaaggtcggacgtcatgaccc 8137700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 36229047 - 36228995
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||   ||||||||||||||||||||||    
T  36229047 acctcacagttgtgtgtgagtttattttcaa--tggattaccacttcatctaaga 36228995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 10963293 - 10963243
Alignment:
Q  334 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10963293 acctcacagttgtgtgagtttatttt--cagtggattaccacttcatctaaga 10963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 6099571 - 6099631
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| |||||||| ||||||    
T  6099571 tgtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgaccc 6099631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 39435282 - 39435334
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  39435282 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtc 39435334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 70651 - 70592
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | |||||||||||||||||||| ||||||    
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgaccc 70592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 386
Target Start/End: Complemental strand, 12534846 - 12534721
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtg------------acccagaacctcacagttgtgtgagtttattt 358  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||||            |||||| | |||||||||| ||||||||||||    
T  12534846 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagttgcgtgagtttattt 12534747  T
Q  359 tcacagtggattaccacttcatctaaga 386  Q
    |  |||| ||||||||||||||||||||    
T  12534746 t--cagtagattaccacttcatctaaga 12534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 22979601 - 22979660
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||| ||| |||||||||    
T  22979601 aatgtctagaagtcctagctcaactggcaaatgtcgaaattgcaagctcgaacgtcgtga 22979660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 35779625 - 35779566
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  35779625 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 35779566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 42192769 - 42192708
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  42192769 atgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 42192708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 1469 - 1409
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||| |||| ||||||| |||||| ||||||||||||| ||||||| |||||||    
T  1469 tgtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccc 1409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 3822395 - 3822455
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||| |||||||||||| |||||| | |||||| |||||||||||| |||||||    
T  3822395 tgtctagaagttctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgaccc 3822455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 18752345 - 18752397
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||||||||||||||||||||||  | |||||| |||||||||||||||||    
T  18752345 agaagtcctagttcaactgacaaataccgaaattgtaaggtcggacgtcgtga 18752397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 28817255 - 28817315
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  28817255 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 28817315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 29425356 - 29425416
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| |||| || |||||| ||||||||||||| |||||||| ||||||    
T  29425356 tgtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgaccc 29425416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 32333113 - 32333173
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| ||||||| |||||||    
T  32333113 tgtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgaccc 32333173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 41753108 - 41753052
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  |||| |||||||    
T  41753108 gtctagaagtcctagctcaactgacaaatgtcgaaattgcaagaccggatgtcgtga 41753052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 6602646 - 6602587
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 6602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 6678099 - 6678040
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 6678040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 40911221 - 40911280
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||| |||||||||||||||    
T  40911221 gtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgaccc 40911280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 328
Target Start/End: Complemental strand, 7403807 - 7403765
Alignment:
Q  286 ttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  7403807 ttcaactgccaaatgtcaaaattgtaaggtcggacgtcgtgac 7403765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 41849361 - 41849303
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    |||||| |||||| || |||||||| |||||| | ||||||||||||||||||||||||    
T  41849361 atgtctggaagtcttaattcaactggcaaatgccgaaattgcaaggtcggacgtcgtga 41849303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 1393 - 1341
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  1393 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 70576 - 70524
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  70576 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 70524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 1078701 - 1078649
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  1078701 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 1078649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 6602571 - 6602519
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  6602571 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 6602519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 6678024 - 6677972
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  6678024 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 6677972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 387
Target Start/End: Original strand, 9292105 - 9292146
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaagaa 387  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  9292105 tgtgtgagtttattttca--gtggattaccacttcatctaagaa 9292146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 20269542 - 20269658
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 368  Q
    ||||| ||||| ||| ||||||| |||||  | |||||| |||| ||||||| |||| |||  | ||||||||  ||||||||||||||||  || ||||    
T  20269542 gtctaaaagtcttagctcaactggcaaataccgaaattgtaaggccggacgttgtgatccaagatctcacagttgtgtgtgagtttatttt--caatgga 20269639  T
Q  369 ttaccacttcatctaagaa 387  Q
    |||||| ||||||||||||    
T  20269640 ttaccatttcatctaagaa 20269658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 387
Target Start/End: Original strand, 21056171 - 21056287
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccagaacctcacagt--tgtgtgagtttattttcacagtgga 368  Q
    ||||| ||||| ||| ||||||| |||||  | |||||| |||| ||||||| |||| |||  | ||||||||  ||||||||||||||||  || ||||    
T  21056171 gtctaaaagtcttagctcaactggcaaataccgaaattgtaaggccggacgttgtgatccaagatctcacagttgtgtgtgagtttatttt--caatgga 21056268  T
Q  369 ttaccacttcatctaagaa 387  Q
    |||||| ||||||||||||    
T  21056269 ttaccatttcatctaagaa 21056287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 32333189 - 32333241
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  32333189 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 32333241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 35779550 - 35779498
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  35779550 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 35779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 9292018 - 9292077
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||||| |||||| || | ||||||| |||||||    
T  9292018 gtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgaccc 9292077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Original strand, 42885261 - 42885301
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  42885261 tgtgtgagtttattttca--gtggattaccacttcatctaaga 42885301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 7813397 - 7813447
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaa 384  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||    
T  7813397 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 18386707 - 18386765
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    ||||||||||| |||| ||||||||||||||   |||||||||||||||| ||| ||||    
T  18386707 tgtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgac 18386765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 28817333 - 28817383
Alignment:
Q  336 ctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28817333 ctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 28817383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 39303308 - 39303366
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||| ||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||    
T  39303308 tgtcaagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgac 39303366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 386
Target Start/End: Complemental strand, 42192690 - 42192640
Alignment:
Q  336 ctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  42192690 ctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 42192640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 1078776 - 1078715
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgacccag 332  Q
    ||||||||||| ||| |||||||  ||||| | ||||||||||| |||||||| ||||||||    
T  1078776 gtctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccag 1078715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 330
Target Start/End: Complemental strand, 4531112 - 4531051
Alignment:
Q  269 atgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||||| |||| || |||||| | |||||||||||  ||||||| ||||||    
T  4531112 atgtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgaccc 4531051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 328
Target Start/End: Original strand, 7792661 - 7792718
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    ||||||||||||||| ||||||| |||||| | |||||||||||  |||||| |||||    
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgac 7792718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 31695398 - 31695353
Alignment:
Q  270 tgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggt 315  Q
    ||||||||||| |||| ||||||| || ||||||||||||||||||    
T  31695398 tgtctagaagttctagctcaactggcacatgtcaaaattgcaaggt 31695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 2907090 - 2907141
Alignment:
Q  334 acctcacagttgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||| || ||||||| ||||| |||||||||||||||| |||||||    
T  2907090 acctcacagttatgggagtttaatttca-agtggattaccacttcgtctaaga 2907141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 13891165 - 13891217
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||| ||||||||||||||||||    
T  13891165 acctcacagttgtgtgtgagtttattttca--gtggtttaccacttcatctaaga 13891217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 45264770 - 45264711
Alignment:
Q  268 aatgtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    |||||||||||||||||  ||||||| |||||| | ||||||| |||||| ||||||||||    
T  45264770 aatgtctagaagtcctaactcaactggcaaatgccgaaattgc-aggtcgaacgtcgtgac 45264711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 56481 - 56540
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||||||||||| |||||||    
T  56481 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgaccc 56540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 56556 - 56608
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  56556 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 56608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 990 - 931
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||| ||||||    
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgaccc 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 915 - 863
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  915 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 330
Target Start/End: Complemental strand, 10101 - 10042
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    ||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||| ||||    
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaaccc 10042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 386
Target Start/End: Complemental strand, 10014 - 9974
Alignment:
Q  344 tgtgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  10014 tgtgtgagtttattttca--gtggattaccacttcatctaaga 9974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 34822 - 34875
Alignment:
Q  275 agaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgac 328  Q
    ||||||||||| ||||||| |||||| | ||||||||||| |||||||||||||    
T  34822 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgac 34875  T

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Target: scaffold0360 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 14495 - 14551
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||| |||||||||  || |||||||||||| ||||||||||| ||||||||||||    
T  14495 gtctataagtcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtga 14551  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 14004 - 13952
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  14004 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 13952  T

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Target: scaffold0119; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 19684 - 19632
Alignment:
Q  334 acctcacagttgtgtg--agtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  19684 acctcacagttgtgtgtgagtttattttca--gtggattaccacttcatctaaga 19632  T

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Target: scaffold0119; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 14079 - 14023
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||||||||||||| ||||||| |||||  | ||||||||||| ||||||| ||||    
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtga 14023  T

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Target: scaffold0119; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 19759 - 19703
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtga 327  Q
    ||||||||||||||| ||||||| |||||  | ||||||||||| ||||||| ||||    
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtga 19703  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 22174 - 22222
Alignment:
Q  282 ctagttcaactgacaaatgtcaaaattgcaaggtcggacgtcgtgaccc 330  Q
    |||| |||||||||||||| | |||||| |||| |||||||||||||||    
T  22174 ctagctcaactgacaaatgccgaaattgtaaggccggacgtcgtgaccc 22222  T

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Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 22238 - 22290
Alignment:
Q  334 acctcacagttg--tgtgagtttattttcacagtggattaccacttcatctaaga 386  Q
    ||||||||||||  |||||||||| |||||  |||||||||||||||||||||||    
T  22238 acctcacagttgcgtgtgagtttaatttca--gtggattaccacttcatctaaga 22290  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 114252 - 114304
Alignment:
Q  271 gtctagaagtcctagttcaactgacaaatgtcaaaattgcaaggtcggacgtc 323  Q
    ||||||||||||||| ||||||| |||||| | |||||| |||| ||||||||    
T  114252 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtc 114304  T

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