View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10911_low_9 (Length: 244)
Name: NF10911_low_9
Description: NF10911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10911_low_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 32875527 - 32875301
Alignment:
| Q |
18 |
ccatttacttttaattacacaattgcttttagttttaccaaagaaagagacaatataactcaccaatgcaagtattccttcaaaaaagggttactagggc |
117 |
Q |
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| T |
32875527 |
ccatttacttttaattacacaattgcttttagttttaccaaagaaagagacaatataactcaccaatgcaagtattccttcaaaaaagggttactagggc |
32875428 |
T |
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| Q |
118 |
taggtgcatctgcgtccaccataacctaatgagactcaaccaaaccaaaattaatgcacattacatgaagatgctaaacatgatttaaattgtagctcaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32875427 |
taggtgcatctgcgtccaccataacctaatgagactcaaccaaaccaaaattaatgcacattacatgaagatgctaaacatgatttaaattgtagctcaa |
32875328 |
T |
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| Q |
218 |
tgaaacataaggtgatttggtgggttt |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
32875327 |
tgaaacataaggtgatttggtgggttt |
32875301 |
T |
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