View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10912_high_2 (Length: 606)
Name: NF10912_high_2
Description: NF10912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10912_high_2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 364; Significance: 0; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 19 - 591
Target Start/End: Original strand, 10873108 - 10873691
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10873108 |
cccattgcatcacccgttgaacaagtgaacctagtgtataaattctttccagccatagtagctttaatactctgtagtcttgcaaatctacttgacctaa |
10873207 |
T |
|
| Q |
119 |
atacata-----------atcaatcag----ccaaatgagtaatttcaacaaaaataaaagtaaaacatataggagaaagttcaaagtttaaaattactt |
203 |
Q |
| |
|
||| ||| |||||||| ||||||||||||||||||||||| | | ||| ||||| | |||||||||||| || |||||||||| |
|
|
| T |
10873208 |
ataaatatcgcagagaaaatcaatcacttatccaaatgagtaatttcaacaaaatttatagtgaaacaga----agaaagttcaaaattgaaaattactt |
10873303 |
T |
|
| Q |
204 |
acttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttatgacggg |
303 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
10873304 |
acttgttgaaagtgtgagagagggaatcaaaattttgaggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttacgactgg |
10873403 |
T |
|
| Q |
304 |
ggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaaccttcg |
403 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |
|
|
| T |
10873404 |
ggctcgggtcattccgtcacggaggacaacggcggaagcaccaccggaaacataaatagctttacagcctctattggtgcttgcaaccaaacaaccttcg |
10873503 |
T |
|
| Q |
404 |
gtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcacaaaccctatcggcatctcgcaacact |
503 |
Q |
| |
|
|| |||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10873504 |
gttgttgccatgggcaccgtgtactcattcccgtcgagcaacaaaggaccggcaacacccaccggaatctgaacaaaccctatgggcatctcgcaacact |
10873603 |
T |
|
| Q |
504 |
gtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccactgcttggttcctaat |
591 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10873604 |
gtcctaatatagaatcgtaatcaaaaccttccatcggtaaaccttcaagtgaccttccggtaactctctccacggcttggttcctaat |
10873691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 19 - 591
Target Start/End: Original strand, 10878179 - 10878762
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10878179 |
cccattgcatcacccgttgaacaagtgaacctagtgtataaattctttccagccatagtagctttaatactctgtagtcttgcaaatctacttgacctaa |
10878278 |
T |
|
| Q |
119 |
atacata-----------atcaatcag----ccaaatgagtaatttcaacaaaaataaaagtaaaacatataggagaaagttcaaagtttaaaattactt |
203 |
Q |
| |
|
||| ||| |||||||| ||||||||||||||||||||||| | | ||| ||||| | |||||||||||| || |||||||||| |
|
|
| T |
10878279 |
ataaatatcgcagagaaaatcaatcacttatccaaatgagtaatttcaacaaaatttatagtgaaacaga----agaaagttcaaaattgaaaattactt |
10878374 |
T |
|
| Q |
204 |
acttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttatgacggg |
303 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
10878375 |
acttgttgaaagtgtgagagagggaatcaaaattttgaggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttacgactgg |
10878474 |
T |
|
| Q |
304 |
ggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaaccttcg |
403 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |
|
|
| T |
10878475 |
ggctcgggtcattccgtcacggaggacaacggcggaagcaccaccggaaacataaatagctttacagcctctattggtgcttgcaaccaaacaaccttcg |
10878574 |
T |
|
| Q |
404 |
gtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcacaaaccctatcggcatctcgcaacact |
503 |
Q |
| |
|
|| |||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10878575 |
gttgttgccatgggcaccgtgtactcattcccgtcgagcaacaaaggaccggcaacacccaccggaatctgaacaaaccctatgggcatctcgcaacact |
10878674 |
T |
|
| Q |
504 |
gtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccactgcttggttcctaat |
591 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10878675 |
gtcctaatatagaatcgtaatcaaaaccttccatcggtaaaccttcaagtgaccttccggtaactctctccacggcttggttcctaat |
10878762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 19 - 591
Target Start/End: Original strand, 10883250 - 10883833
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10883250 |
cccattgcatcacccgttgaacaagtgaacctagtgtataaattctttccagccatagtagctttaatactctgtagtcttgcaaatctacttgacctaa |
10883349 |
T |
|
| Q |
119 |
atacata-----------atcaatcag----ccaaatgagtaatttcaacaaaaataaaagtaaaacatataggagaaagttcaaagtttaaaattactt |
203 |
Q |
| |
|
||| ||| |||||||| ||||||||||||||||||||||| | | ||| ||||| | |||||||||||| || |||||||||| |
|
|
| T |
10883350 |
ataaatatcgcagagaaaatcaatcacttatccaaatgagtaatttcaacaaaatttatagtgaaacaga----agaaagttcaaaattgaaaattactt |
10883445 |
T |
|
| Q |
204 |
acttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttatgacggg |
303 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
10883446 |
acttgttgaaagtgtgagagagggaatcaaaattttgaggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttacgactgg |
10883545 |
T |
|
| Q |
304 |
ggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaaccttcg |
403 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |
|
|
| T |
10883546 |
ggctcgggtcattccgtcacggaggacaacggcggaagcaccaccggaaacataaatagctttacagcctctattggtgcttgcaaccaaacaaccttcg |
10883645 |
T |
|
| Q |
404 |
gtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcacaaaccctatcggcatctcgcaacact |
503 |
Q |
| |
|
|| |||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
10883646 |
gttgttgccatgggcaccgtgtactcattcccgtcgagcaacaaaggaccggcaacacccaccggaatctgaacaaaccctatgggcatctcgcaacact |
10883745 |
T |
|
| Q |
504 |
gtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccactgcttggttcctaat |
591 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10883746 |
gtcctaatatagaatcgtaatcaaaaccttccatcggtaaaccttcaagtgaccttccggtaactctctccacggcttggttcctaat |
10883833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 178 - 591
Target Start/End: Complemental strand, 10867027 - 10866614
Alignment:
| Q |
178 |
agaaagttcaaagtttaaaattacttacttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctctt |
277 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10867027 |
agaaagttcaaaattgaaaattacttacttgttgaaagtgtgagagagggaatcaaaattttgaggatcttctaaaaagaatttcaactgggaagctctt |
10866928 |
T |
|
| Q |
278 |
ttggcggagttgaatcttatgacgggggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgt |
377 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| |||||||| || ||||| ||||| |||||||| ||||| |||||||||||||||||||| ||||| | |
|
|
| T |
10866927 |
ttggcagagttgaatcttacaacgggggctctggtcattccgtcgcggagcacaaccgcggaagccccaccggaaacataaatagctttacagcctctat |
10866828 |
T |
|
| Q |
378 |
tggtacttgcaaccaaacaaccttcggtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcac |
477 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| || ||||| || |
|
|
| T |
10866827 |
tggtgcttgcaaccaaacaaccttcggttgttgccatgggcaccgtgtactcattcccgtcgagcaacaaaggaccggcaacacccaccggaatctgaac |
10866728 |
T |
|
| Q |
478 |
aaaccctatcggcatctcgcaacactgtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccact |
577 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10866727 |
aaaccctatcggcatctcgcaacactgtcctaatatagaattgtagtcaaaaccttccatcggtaaaccttcaagtgaccttccggtaactctctccacc |
10866628 |
T |
|
| Q |
578 |
gcttggttcctaat |
591 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10866627 |
gcttggttcctaat |
10866614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 202 - 598
Target Start/End: Original strand, 10887362 - 10887758
Alignment:
| Q |
202 |
ttacttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttatgacg |
301 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10887362 |
ttacttgttgaaagtgtgagagagggaatcaaaattttgaggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttacaacg |
10887461 |
T |
|
| Q |
302 |
ggggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaacctt |
401 |
Q |
| |
|
|||||||| |||||||| || ||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
10887462 |
ggggctctggtcattccgtcgcggagcacaacagcggaagcacctccggaaacataaatagctttacagcctctgttggtgcttgcaaccaaacaacctt |
10887561 |
T |
|
| Q |
402 |
cggtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcacaaaccctatcggcatctcgcaaca |
501 |
Q |
| |
|
|||| |||||||| ||||||||||| || || ||||| |||||||||||||||||||||||||| || || || |||||||||||||||||||||||||| |
|
|
| T |
10887562 |
cggttgttgccatgggcaccgtgtattcattcccgtcgagcaacaaaggaccggcaacacccaccggaatttgaacaaaccctatcggcatctcgcaaca |
10887661 |
T |
|
| Q |
502 |
ctgtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccactgcttggttcctaatctctgct |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
10887662 |
ctgtcctaatatagaatcgtagtcaaaacctttcatcggtaaaccttcaagtgaccttccggtaaccctctccactgcttggttcctaatctttgct |
10887758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 184 - 592
Target Start/End: Complemental strand, 39676585 - 39676177
Alignment:
| Q |
184 |
ttcaaagtttaaaattacttacttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctcttttggcg |
283 |
Q |
| |
|
|||||| || |||| ||||||||||||||| || ||||| | || |||||||||| | |||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
39676585 |
ttcaaaattcaaaaatacttacttgttgaatgtatgagagatggaatcaaaatttagaggatcttccaaaaagaatttcaactgagaagctcttttagcg |
39676486 |
T |
|
| Q |
284 |
gagttgaatcttatgacgggggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgttggtac |
383 |
Q |
| |
|
||||||||||||| ||| || ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39676485 |
gagttgaatcttacgacaggagctctggtcattccatcacgaaggacaactgccgaagcaccaccagaaacataaatagctttacaacctctgttggtac |
39676386 |
T |
|
| Q |
384 |
ttgcaaccaaacaaccttcggtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcacaaaccc |
483 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| ||||| ||||| ||||| || || |||||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
39676385 |
ttgcaactaaacaaccttcagtggttgccattggcacggtgtattctttaccatcgagcaacaaaggaccggcaacacccaccggaatctgaacaaaccc |
39676286 |
T |
|
| Q |
484 |
tatcggcatctcgcaacactgtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccactgcttgg |
583 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
39676285 |
tattggcatctcgcaacattgtcctaatatagaatcataatcaaaaccttccattggtaaaccttcaagtgaccttccagtaactctctccacagcttgg |
39676186 |
T |
|
| Q |
584 |
ttcctaatc |
592 |
Q |
| |
|
||||||||| |
|
|
| T |
39676185 |
ttcctaatc |
39676177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 202 - 585
Target Start/End: Complemental strand, 10046623 - 10046240
Alignment:
| Q |
202 |
ttacttgttgaaagtgtgagatagggcatcaaaattttgtggatcttctaaaaagaatttcaactgagaagctcttttggcggagttgaatcttatgacg |
301 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||| |||||||||||||| || || ||||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
10046623 |
ttacttgttgaaagtgtgagagagggaatcaaaattttgaggatcttctaaaaaaaactttaactgagaagctcttttagcggagttgaatcttacgacg |
10046524 |
T |
|
| Q |
302 |
ggggctctcgtcattccatcacggaggacaactgcggaagcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaacctt |
401 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
10046523 |
ggggctctggtcatgccatcacggaggacaaccgcggaagcaccaccggaaacataaatagctttacaacctctattagtacttgcaaccaaacaacctt |
10046424 |
T |
|
| Q |
402 |
cggtggttgccatcggcaccgtgtactctttgccgtcaagcaacaaaggaccggcaacacccacggggatctgcacaaaccctatcggcatctcgcaaca |
501 |
Q |
| |
|
| || |||||||||||||||||||||||||| || |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||||||||| ||||| |
|
|
| T |
10046423 |
ccgtcgttgccatcggcaccgtgtactctttcccatcaagcaacaaaggtccggcaactcccaccggaatctgaacaaatcctatcggcatctcacaaca |
10046324 |
T |
|
| Q |
502 |
ctgtcctaatatagaatcgtagtcaaaaccttccatcggtagaccttcaagtgaccttccggtaactctctccactgcttggtt |
585 |
Q |
| |
|
|||||||||||| ||||| || |||||||||||||| |||| ||| |||||| ||||||||||||||||||| |||||||| |
|
|
| T |
10046323 |
ctgtcctaatatcgaatcataatcaaaaccttccattggtaaacccgagagtgactttccggtaactctctccaccgcttggtt |
10046240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 10887165 - 10887267
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
10887165 |
cccattgcatcacccgttgaacaagtgaatctagtgtataaattctttcctgccatagtagctttaatactctgtaatcttgcaaatctacttgacctaa |
10887264 |
T |
|
| Q |
119 |
ata |
121 |
Q |
| |
|
||| |
|
|
| T |
10887265 |
ata |
10887267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 10867204 - 10867102
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
10867204 |
cccattgcatcacccgttgaacaagtgaatctagtgtacaaattctttcctgccatagtagctttaatactctgtaatcttgcaaatctacttgacctaa |
10867105 |
T |
|
| Q |
119 |
ata |
121 |
Q |
| |
|
||| |
|
|
| T |
10867104 |
ata |
10867102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 39676747 - 39676645
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||| || || |||||||||||| | || | ||||||||||||||||||||||| |
|
|
| T |
39676747 |
cccattgcatcaccggttgaacaagtgaatctagtgtataaattctttcctgctatagtagctttaatattttgtaatcttgcaaatctacttgacctaa |
39676648 |
T |
|
| Q |
119 |
ata |
121 |
Q |
| |
|
||| |
|
|
| T |
39676647 |
ata |
39676645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 10046849 - 10046747
Alignment:
| Q |
19 |
cccattgcatcacccgttgaacaagtgaatctggtgtataaattctttccagccattgtagctttaatactctgcagtcttgcaaatctacttgacctaa |
118 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| |||||||||||||||| |||||||| ||||||||| |||| | ||| ||||||||||||||||| | |
|
|
| T |
10046849 |
cccattgcatcaccggttgaacatgtaaatctaatgtataaattctttcctgccattgttgctttaatattctgtaatctcgcaaatctacttgacctga |
10046750 |
T |
|
| Q |
119 |
ata |
121 |
Q |
| |
|
||| |
|
|
| T |
10046749 |
ata |
10046747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 37948325 - 37948263
Alignment:
| Q |
340 |
agcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaaccttc |
402 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||| || ||||| ||||||||||| ||||| |
|
|
| T |
37948325 |
agcaccaccagaaacatatatagctttacaccctctattagtactagcaaccaaacacccttc |
37948263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 338 - 549
Target Start/End: Original strand, 30709477 - 30709688
Alignment:
| Q |
338 |
gaagcaccaccagaaacataaatagctttacaacctctgttggtacttgcaaccaaacaaccttcggtggttgccatcggcaccgtgtactctttgccgt |
437 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| ||||| || ||||||||||| | ||| ||||| ||||| ||||| ||||| |||||||| || | |
|
|
| T |
30709477 |
gaagctccaccagaaacatgaatagctttacaccctctattagtacttgcaacaagacacccttcagtggtagccatgggcacagtgtactcaactccat |
30709576 |
T |
|
| Q |
438 |
caagcaacaaaggaccggcaacacccacggggatctgcacaaaccctatcggcatctcgcaacactgtcctaatatagaatcgtagtcaaaaccttccat |
537 |
Q |
| |
|
| | ||||| ||||| |||||||| || || || || |||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
30709577 |
ctaacaacagtggacccgcaacaccaaccggaatttgaacaaaccctatcggcatctcacaacactgtcccaatatcgaatcgtaatcaaaaccttccaa |
30709676 |
T |
|
| Q |
538 |
cggtagaccttc |
549 |
Q |
| |
|
||||| |||||| |
|
|
| T |
30709677 |
cggtaaaccttc |
30709688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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