View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10912_low_22 (Length: 250)
Name: NF10912_low_22
Description: NF10912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10912_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 44750921 - 44750685
Alignment:
| Q |
1 |
tgctatcttggagaaaatattgcagctatatgatcaatgttttgtttagtcaatatgtacagtctataatgttgttttaatacttgacaaaatatgaaat |
100 |
Q |
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| T |
44750921 |
tgctatcttggagaaaatattgcagctatatgatcaatgttttgtttagtcaatatgtacagtctataatgttgttttaatacttgactaaatatgaaat |
44750822 |
T |
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| Q |
101 |
gctagcaggtttttgttaatacaattatcagtttttctttactgaagcatcatagatggaactttcaaattatagctagaactcttataaattggctcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44750821 |
gctagcaggtttttgttaatacaattatcagtttttctttactgaagcatcatagatggaactttcaaattatagctagaactcttataaattggctcac |
44750722 |
T |
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| Q |
201 |
tatatatatttttatctcaaaacggttatatttttct |
237 |
Q |
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||||||||||||| ||||||||||||||||||||||| |
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| T |
44750721 |
tatatatatttttctctcaaaacggttatatttttct |
44750685 |
T |
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