View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10914_high_15 (Length: 231)

Name: NF10914_high_15
Description: NF10914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10914_high_15
NF10914_high_15
[»] chr7 (21 HSPs)
chr7 (112-219)||(5811161-5811268)
chr7 (109-219)||(46475110-46475221)
chr7 (113-211)||(13108241-13108339)
chr7 (112-219)||(23980217-23980324)
chr7 (116-211)||(15020373-15020468)
chr7 (116-219)||(21807324-21807427)
chr7 (114-219)||(36346564-36346669)
chr7 (111-219)||(34828151-34828259)
chr7 (112-191)||(42950034-42950113)
chr7 (113-219)||(45782658-45782765)
chr7 (111-172)||(384573-384635)
chr7 (113-219)||(28307493-28307600)
chr7 (113-220)||(26972201-26972309)
chr7 (112-219)||(31148376-31148483)
chr7 (113-219)||(36957515-36957620)
chr7 (114-189)||(7699882-7699958)
chr7 (114-189)||(7700080-7700156)
chr7 (114-189)||(7700278-7700354)
chr7 (114-189)||(7700476-7700552)
chr7 (113-212)||(42220962-42221061)
chr7 (113-219)||(34108512-34108619)
[»] chr6 (4 HSPs)
chr6 (115-219)||(14023020-14023124)
chr6 (113-219)||(24208530-24208636)
chr6 (113-196)||(3118045-3118129)
chr6 (75-110)||(4144852-4144887)
[»] chr2 (12 HSPs)
chr2 (102-219)||(6376226-6376343)
chr2 (109-199)||(36315667-36315758)
chr2 (111-219)||(37498859-37498970)
chr2 (112-219)||(44958199-44958307)
chr2 (112-196)||(16089930-16090014)
chr2 (117-219)||(3830900-3831002)
chr2 (113-219)||(33732655-33732761)
chr2 (116-198)||(13535751-13535834)
chr2 (114-219)||(37914236-37914341)
chr2 (114-215)||(41188859-41188961)
chr2 (171-219)||(24137149-24137197)
chr2 (163-219)||(14573081-14573137)
[»] chr8 (10 HSPs)
chr8 (114-204)||(33726113-33726203)
chr8 (113-219)||(18184639-18184745)
chr8 (112-219)||(36189302-36189408)
chr8 (112-219)||(30432425-30432532)
chr8 (112-205)||(12665445-12665539)
chr8 (113-219)||(35849451-35849557)
chr8 (114-149)||(3690602-3690637)
chr8 (115-205)||(38845023-38845114)
chr8 (112-219)||(31318891-31318999)
chr8 (114-219)||(10203750-10203856)
[»] chr3 (10 HSPs)
chr3 (111-219)||(39467098-39467206)
chr3 (112-219)||(51339781-51339888)
chr3 (111-213)||(29472901-29473003)
chr3 (114-219)||(21559647-21559753)
chr3 (114-199)||(38231398-38231484)
chr3 (113-219)||(34749896-34750003)
chr3 (109-148)||(53638277-53638316)
chr3 (114-219)||(46111943-46112049)
chr3 (113-205)||(30735494-30735587)
chr3 (114-180)||(20856153-20856220)
[»] chr5 (12 HSPs)
chr5 (115-200)||(4300544-4300629)
chr5 (113-217)||(31800646-31800750)
chr5 (113-196)||(42683708-42683792)
chr5 (114-217)||(13347216-13347320)
chr5 (112-196)||(27553372-27553455)
chr5 (164-219)||(1815666-1815721)
chr5 (114-219)||(39371013-39371119)
chr5 (171-219)||(17225403-17225451)
chr5 (113-219)||(14831630-14831737)
chr5 (113-219)||(40887940-40888047)
chr5 (114-219)||(2237362-2237468)
chr5 (114-199)||(19596067-19596153)
[»] chr1 (5 HSPs)
chr1 (116-219)||(19258674-19258777)
chr1 (107-217)||(28647441-28647551)
chr1 (107-215)||(34307130-34307239)
chr1 (113-219)||(2509110-2509217)
chr1 (107-219)||(46901727-46901840)
[»] chr4 (12 HSPs)
chr4 (107-219)||(44275792-44275904)
chr4 (114-219)||(21390955-21391060)
chr4 (114-219)||(46192445-46192551)
chr4 (114-200)||(52191200-52191286)
chr4 (114-219)||(49243901-49244006)
chr4 (113-220)||(28093094-28093202)
chr4 (113-219)||(7217851-7217958)
chr4 (113-219)||(45829256-45829362)
chr4 (115-200)||(25436922-25437008)
chr4 (116-212)||(35545005-35545102)
chr4 (111-219)||(6112716-6112824)
chr4 (114-219)||(3672360-3672466)
[»] scaffold0043 (1 HSPs)
scaffold0043 (112-189)||(87160-87237)


Alignment Details
Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 5811161 - 5811268
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  5811161 taggaaaaagataggtagacacccttttttatacacctcccatgtacacctcatgtgttaggggtattttagtaatttcacatcacatcctcaccccttt 5811260  T
Q  212 tcatctct 219  Q
    ||||||||    
T  5811261 tcatctct 5811268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 46475221 - 46475110
Alignment:
Q  109 atataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgtta-ggggtattttaataatttcacatcacatcgtcactc 207  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||| |||| ||||||||||| ||||||||||| |||||||||||||||||||||| |    
T  46475221 atataggaaaaagataggtagacacccttttttatacacctctcatgtacatctcatgtgttatggggtattttagtaatttcacatcacatcgtcaccc 46475122  T
Q  208 cttttcatctct 219  Q
    ||||||||||||    
T  46475121 cttttcatctct 46475110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 13108339 - 13108241
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  13108339 aggaaaaagataggtagacacccttttttatacacctttcatgtacacctcatgtgttaggggtattttagtaatttcacatcacatcctcaccccttt 13108241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 23980324 - 23980217
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||||| ||||||||||||||||||||  | |||| |||| ||||| |||||| ||||||||| ||||||||||||||||| |||| |||||    
T  23980324 taggaaaaagataggtagacatccttttttatacattttccatgtacatctcatatgttagaggtattttagtaatttcacatcacatcctcaccccttt 23980225  T
Q  212 tcatctct 219  Q
    ||||||||    
T  23980224 tcatctct 23980217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 15020468 - 15020373
Alignment:
Q  116 aaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||| |||||||| | |||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||| ||| |||| |||||    
T  15020468 aaaaagataaatagacattcatttttatacacctcccatatacatctcatgtgttagggatattttagtaatttcacatcatatcttcaccccttt 15020373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 21807324 - 21807427
Alignment:
Q  116 aaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttttcat 215  Q
    |||||||||| | |||| |||||||||||||| || ||| |||||| || ||||||||||||||||| ||||||||||| ||||| |||  | |||||||    
T  21807324 aaaaagataggttgacaaccttttttatacacttctcatatacaccccacgtgttaggggtattttagtaatttcacataacatcatcatccattttcat 21807423  T
Q  216 ctct 219  Q
    ||||    
T  21807424 ctct 21807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 36346564 - 36346669
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| ||||||| |||||||||  || |||||| ||||||||||||||||||||| |||||| |||||| ||| |||| | ||||    
T  36346564 ggaaaaagataggtagacaccctttttcatacacctcttatgtacaccctcatgtgttaggggtattttagtaattttacatcatatcatcac-cttttt 36346662  T
Q  213 catctct 219  Q
    |||||||    
T  36346663 catctct 36346669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 34828259 - 34828151
Alignment:
Q  111 ataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctt 210  Q
    ||||||||||||||| |||||||||||||| ||||||| |  ||  ||||| ||| |||||||||||||||| |||||| |||||| ||| |||   |||    
T  34828259 ataggaaaaagataggtagacatcctttttcatacaccacttatgcacaccccatatgttaggggtattttagtaattttacatcatatcatcatcactt 34828160  T
Q  211 ttcatctct 219  Q
    |||||||||    
T  34828159 ttcatctct 34828151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 42950034 - 42950113
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttca 191  Q
    |||||||||||||| |||||| ||||||||||||||||  ||| |||||| ||||| | |||||||||||| ||||||||    
T  42950034 taggaaaaagataggtagacacccttttttatacacctagcatgtacaccccatgtttcaggggtattttagtaatttca 42950113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 45782658 - 45782765
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacac-ctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||| |||||||||||||| |   || ||||| | |||||||||||||||||||| |||||| |||||| ||| |||| | |||    
T  45782658 aggaaaaagataggtagacacccttttttatacactttttatgtacactcccatgtgttaggggtattttagtaattttacatcatatcatcaccctttt 45782757  T
Q  212 tcatctct 219  Q
    ||||||||    
T  45782758 tcatctct 45782765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 384635 - 384573
Alignment:
Q  111 ataggaaaaagatagatagacatccttttt-tatacacctcccatctacacctcatgtgttag 172  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||    
T  384635 ataggaaaaagataggtagacatcctttttctatacacctcccatgtacatctcatgtgttag 384573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 28307493 - 28307600
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||||| ||||| |||||||||  || |||| || ||| ||||| |||||||||| |||||| |||||| ||| |||| | |||    
T  28307493 aggaaaaagataggtagacatcttttttcatacacctcttatgtacacccccatatgttaagggtattttagtaattttacatcatatcatcaccctttt 28307592  T
Q  212 tcatctct 219  Q
    ||||||||    
T  28307593 tcatctct 28307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 26972201 - 26972309
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||| ||||||| |||||| ||  || |||||| | |||| |||||||||||| | |||||| |||||| ||| |||| | |||    
T  26972201 aggaaaaagataggtagacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcaccctttt 26972300  T
Q  212 tcatctctc 220  Q
    |||||||||    
T  26972301 tcatctctc 26972309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 31148483 - 31148376
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||||| ||||||  |||||| |||||||||  ||  ||||| ||| |||||||  ||||||| |||||| |||||| ||| |||| | |||    
T  31148483 taggaaaaagataggtagacactctttttcatacacctcttatacacaccccatatgttaggcttattttagtaattttacatcatatcatcacccattt 31148384  T
Q  212 tcatctct 219  Q
    ||||||||    
T  31148383 tcatctct 31148376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 36957620 - 36957515
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||| ||||||   ||||||||||||||  ||| |||||| |||||||| ||||||||||| |||||| |||| ||||  |||  | ||||    
T  36957620 aggaaaaagataggtagacacaattttttatacacctttcatatacacc-catgtgttgggggtattttagtaattttacattacattatcatccatttt 36957522  T
Q  213 catctct 219  Q
    |||||||    
T  36957521 catctct 36957515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 7699882 - 7699958
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataattt 189  Q
    |||||||||||| || ||| ||||||| |||||||||  || |||||| |||||||||| |||||||||| ||||||    
T  7699882 ggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattt 7699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 7700080 - 7700156
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataattt 189  Q
    |||||||||||| || ||| ||||||| |||||||||  || |||||| |||||||||| |||||||||| ||||||    
T  7700080 ggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattt 7700156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 7700278 - 7700354
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataattt 189  Q
    |||||||||||| || ||| ||||||| |||||||||  || |||||| |||||||||| |||||||||| ||||||    
T  7700278 ggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattt 7700354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 7700476 - 7700552
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataattt 189  Q
    |||||||||||| || ||| ||||||| |||||||||  || |||||| |||||||||| |||||||||| ||||||    
T  7700476 ggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattt 7700552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 42220962 - 42221061
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggta-ttttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||| ||||||| ||||||| |  || |||||  ||||||||||||||| ||||| |||||| |||||| ||| |||| |||||    
T  42220962 aggaaaaagataggtagaca-cctttttcatacaccacttatgtacactccatgtgttaggggtatttttagtaatttaacatcatatcatcaccccttt 42221060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 34108619 - 34108512
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacac-ctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| || ||| ||||||| |||||| ||  || ||||| | ||||| |||||||||||| | |||||| |||||| ||| |||| | |||    
T  34108619 aggaaaaagataggtaaacaccctttttcatacacttcttatgtacactcccatgtattaggggtatttgagtaattttacatcatatcatcaccctttt 34108520  T
Q  212 tcatctct 219  Q
    ||||||||    
T  34108519 tcatctct 34108512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 115 - 219
Target Start/End: Complemental strand, 14023124 - 14023020
Alignment:
Q  115 gaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttttca 214  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||    
T  14023124 gaaaaagataggtagacacccttttttatacacctcccatgtacacctcatgtgttaggggtattttagtaatttcacatcacatcgtcaccccttgtca 14023025  T
Q  215 tctct 219  Q
    |||||    
T  14023024 tctct 14023020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 24208636 - 24208530
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||    
T  24208636 aggaaaaagataggtagacatccttttttatacacctctcatttacacctcatgtgttaggggtattttagtaatttcacatcacatcctcacccttttt 24208537  T
Q  213 catctct 219  Q
    |||||||    
T  24208536 catctct 24208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 3118045 - 3118129
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacac-ctcatgtgttaggggtattttaataatttcacatca 196  Q
    ||||||||||||| |||||||||||||| ||||| |||  || ||||| | ||||| |||||||||||||| |||||| ||||||    
T  3118045 aggaaaaagataggtagacatcctttttcatacatctcttatgtacactcccatgtattaggggtattttagtaattttacatca 3118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 110
Target Start/End: Complemental strand, 4144887 - 4144852
Alignment:
Q  75 gtacaattttacgtgttttattaactaatgtcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||    
T  4144887 gtacaattttacgtgttttattaactaatgtcaaat 4144852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 6376226 - 6376343
Alignment:
Q  102 atgtcaaatataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcg 201  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||     
T  6376226 atgtaaaatttaggaaaaagataggtagacatccttttttatacacctcccatgtacatctcatgtgttagaggtattttagtaatttcacatcacatcc 6376325  T
Q  202 tcactccttttcatctct 219  Q
    |||| | |||||||||||    
T  6376326 tcacccattttcatctct 6376343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 36315758 - 36315667
Alignment:
Q  109 atataggaaaaagatagatagacatcctttttt-atacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacat 199  Q
    ||||||||||||||||| ||||||||||||||| |||||||||  || |||||||||||||| |||||||||||||| ||||||||||||||    
T  36315758 atataggaaaaagataggtagacatccttttttgatacacctcttatgtacacctcatgtgtcaggggtattttaatcatttcacatcacat 36315667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 37498859 - 37498970
Alignment:
Q  111 ataggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtca--ctc 207  Q
    ||||||||||||||| |||||| |||||||||||||||||  || |||| || |||||||||||||||||||| |||||| |||||| ||| |||  |||    
T  37498859 ataggaaaaagataggtagacacccttttttatacacctcttatgtacatccccatgtgttaggggtattttagtaattttacatcatatcatcaccctc 37498958  T
Q  208 cttttcatctct 219  Q
     |||||||||||    
T  37498959 tttttcatctct 37498970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 44958307 - 44958199
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcactcctt 210  Q
    |||||||||||||| |||||||||||||| |||||||||  || || ||| ||||||||||||||||||||| |||||| |||||| ||| |||| | ||    
T  44958307 taggaaaaagataggtagacatcctttttcatacacctcttatgtataccctcatgtgttaggggtattttagtaattttacatcatatcatcacccttt 44958208  T
Q  211 ttcatctct 219  Q
    || ||||||    
T  44958207 tttatctct 44958199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 16090014 - 16089930
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatca 196  Q
    |||||||||||||| |||||| | ||||| |||||||||  || |||||| |||||||||||||||||||| |||||| ||||||    
T  16090014 taggaaaaagataggtagacaccttttttcatacacctcttatgtacaccccatgtgttaggggtattttagtaattttacatca 16089930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 3830900 - 3831002
Alignment:
Q  117 aaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttttcatc 216  Q
    ||||||||| |||||| ||||||| |||||||||  || |||||| |||||||||||||||| ||| |||||| |||||| ||  ||||  |||||||||    
T  3830900 aaaagataggtagacaccctttttcatacacctcttatgtacaccccatgtgttaggggtatattagtaattttacatcagataatcaccacttttcatc 3830999  T
Q  217 tct 219  Q
    |||    
T  3831000 tct 3831002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 33732761 - 33732655
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||| |||||| ||||||| |||||||||  || |||||| ||| | |||||||||||||| |||||| |||||| |||  ||| | ||||    
T  33732761 aggaaaaagataggtagacaccctttttcatacacctcttatgtacaccccatatattaggggtattttagtaattttacatcatatcaccacccttttt 33732662  T
Q  213 catctct 219  Q
    |||||||    
T  33732661 catctct 33732655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 13535834 - 13535751
Alignment:
Q  116 aaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcaca 198  Q
    ||||||||||||||||||||||||||||  ||||| ||| || | || ||||||  |||||||||||| |||||||||||||||    
T  13535834 aaaaagatagatagacatccttttttatgtacctctcatgtatacccccatgtgacaggggtattttagtaatttcacatcaca 13535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 37914236 - 37914341
Alignment:
Q  114 ggaaaaagatagatagacatcctttttt-atacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| |||||||| |||||||||  || |||||| |||||   |||| ||||||||| ||||||||||||||  |||| ||||||    
T  37914236 ggaaaaagataggtagacacccttttttgatacacctcttatgtacaccccatgtaccaggg-tattttaatcatttcacatcacattatcacccctttt 37914334  T
Q  213 catctct 219  Q
     ||||||    
T  37914335 tatctct 37914341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 41188961 - 41188859
Alignment:
Q  114 ggaaaaagatagatagacatcctttt-ttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||  ||||| |||||| ||||||||||| ||| |||| | ||||||| || | ||||||| |||||| |||||||||| |||  ||||||    
T  41188961 ggaaaaagataggcagacacccttttgttatacacctctcatgtacatcacatgtgtcagagatattttagtaattttacatcacatcatcatccctttt 41188862  T
Q  213 cat 215  Q
    |||    
T  41188861 cat 41188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 24137149 - 24137197
Alignment:
Q  171 aggggtattttaataatttcacatcacatcgtcactccttttcatctct 219  Q
    |||||||||||| ||||||||||||||||| |||  |||||||||||||    
T  24137149 aggggtattttagtaatttcacatcacatcctcatcccttttcatctct 24137197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 14573137 - 14573081
Alignment:
Q  163 catgtgttaggggtattttaataatttcacatcacatcgtcactccttttcatctct 219  Q
    |||||||||||||||||||| |||||| |||||| ||| |||| | ||| |||||||    
T  14573137 catgtgttaggggtattttagtaattttacatcatatcatcacccttttccatctct 14573081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 33726203 - 33726113
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtca 204  Q
    |||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  33726203 ggaaaaagataggtagacacccttttttatacacctcccatgtacacttcatgtgttaggggtattttagtaatttcacatcacatcgtca 33726113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 18184745 - 18184639
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||| |||||||||||||| ||||||||   || ||||||||||||||||||||||||||| |||||| | |||| ||| |||| ||||||    
T  18184745 aggaaaaagataggtagacatcctttttcatacaccttttatgtacacctcatgtgttaggggtattttagtaattttatatcatatcatcacccctttt 18184646  T
Q  213 catctct 219  Q
    |||||||    
T  18184645 catctct 18184639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 36189408 - 36189302
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||||| |||||| ||||||| ||||||| |  || |||||| ||| ||||||||||||||||||||||| | |||| ||| ||||||||||    
T  36189408 taggaaaaagataggtagacaccctttttcatacaccacttatgtacacc-catatgttaggggtattttaataattttatatcatatcatcactccttt 36189310  T
Q  212 tcatctct 219  Q
    ||||||||    
T  36189309 tcatctct 36189302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 30432532 - 30432425
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||| |||||||| ||||||| |||||||||  || |||| | ||| | ||| |||||||||| |||||| |||||| ||| |||| |||||    
T  30432532 taggaaaaagattgatagacaccctttttcatacacctcttatgtacatcccatatattatgggtattttagtaattttacatcatatcatcaccccttt 30432433  T
Q  212 tcatctct 219  Q
    ||||||||    
T  30432432 tcatctct 30432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 12665539 - 12665445
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcac 205  Q
    |||||||||||||| ||||||||||||||  ||||||||  || || ||| ||||||||||||||||||||| |||||| |||||| ||| ||||    
T  12665539 taggaaaaagataggtagacatcctttttcgtacacctcttatgtataccctcatgtgttaggggtattttagtaattttacatcatatcatcac 12665445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 35849451 - 35849557
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||| ||  |||  ||||||||||||||||||| || |||  |||||| |||||  |||||||||||||| |||||||| || | |||| |    
T  35849451 aggaaaaagataggtaagcatttttttttatacacctcccatgtataccatatgtgtcaggggggttttaataatttcatatcacatcatcgccccttct 35849550  T
Q  213 catctct 219  Q
    |||||||    
T  35849551 catctct 35849557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 149
Target Start/End: Original strand, 3690602 - 3690637
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacct 149  Q
    ||||||||||||||||||||||||||||||||||||    
T  3690602 ggaaaaagatagatagacatccttttttatacacct 3690637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 38845023 - 38845114
Alignment:
Q  115 gaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcac 205  Q
    |||||||||||||| ||| | |||||||||||||   ||| |||||| | ||||||||||| ||||||| ||||||| ||||||||| ||||    
T  38845023 gaaaaagatagataaacaccattttttatacacccttcatgtacacccttatgtgttagggttattttagtaatttctcatcacatcatcac 38845114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 31318999 - 31318891
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctt 210  Q
    |||||||||||||| |||||||| ||||| |||||| ||  || |||| || ||||| ||||| |||||| | |||||| |||||| ||| |||| | ||    
T  31318999 taggaaaaagataggtagacatcatttttcatacacttcttatatacacccccatgtattaggagtatttgagtaattttacatcatatcatcacccttt 31318900  T
Q  211 ttcatctct 219  Q
    |||||||||    
T  31318899 ttcatctct 31318891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 10203856 - 10203750
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| ||||||| ||||| |||  || |||| |||||||| |||||| ||||||| |||||| | |||| |||  ||| | ||||    
T  10203856 ggaaaaagataggtagacaccctttttcatacatctcttatgtacaccctcatgtattagggatattttagtaattttatatcatatcaccacccttttt 10203757  T
Q  213 catctct 219  Q
    |||||||    
T  10203756 catctct 10203750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 39467098 - 39467206
Alignment:
Q  111 ataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctt 210  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||| |||||||| |||| ||||    
T  39467098 ataggaaaaagataggtacacacccttttttatacacctcccatgtacacctcatgtgttatggatattttagtaatttcatatcacatcctcacccctt 39467197  T
Q  211 ttcatctct 219  Q
    |||||||||    
T  39467198 ttcatctct 39467206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 51339781 - 51339888
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||||| |||||| ||||||| |||||||||  || ||||| ||||||||||| ||||||||| |||||| |||||| ||| |||| | |||    
T  51339781 taggaaaaagataggtagacaccctttttcatacacctcttatgtacacatcatgtgttagaggtattttagtaattttacatcatatcatcaccctttt 51339880  T
Q  212 tcatctct 219  Q
    ||||||||    
T  51339881 tcatctct 51339888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 29473003 - 29472901
Alignment:
Q  111 ataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctt 210  Q
    ||||||||||||||| |||||||||||||| ||||||| |  ||  ||||| |||||||||||||||||||| |||||| |||||| ||| |||  ||||    
T  29473003 ataggaaaaagataggtagacatcctttttcatacaccacttatgcacaccccatgtgttaggggtattttagtaattttacatcatatcatcatccctt 29472904  T
Q  211 ttc 213  Q
    |||    
T  29472903 ttc 29472901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 21559753 - 21559647
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    ||||||||||||||||||| | ||||| |||||||||  || |||||| | ||||||||||||||||||| |||||| |||||| ||| | || | ||||    
T  21559753 ggaaaaagatagatagacaccatttttcatacacctcttatgtacacccccatgtgttaggggtattttagtaattttacatcatatcattacccttttt 21559654  T
Q  213 catctct 219  Q
    |||||||    
T  21559653 catctct 21559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 38231484 - 38231398
Alignment:
Q  114 ggaaaaagatagatagacatcctttttt-atacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacat 199  Q
    |||||||||||| ||||||||||||||| |||||||||  || |||||| ||||||| ||||||| |||| | ||||||||| ||||    
T  38231484 ggaaaaagataggtagacatccttttttgatacacctcttatgtacaccccatgtgtcaggggtagtttagtcatttcacattacat 38231398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 34749896 - 34750003
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    |||||||||||||  ||||||||||||| |||||| ||  || |||||| | |||| |||||||||||| | |||||| |||||| ||| |||| | |||    
T  34749896 aggaaaaagatagccagacatcctttttcatacacttcttatgtacacccctatgtattaggggtatttgagtaattttacatcatatcatcaccctttt 34749995  T
Q  212 tcatctct 219  Q
    ||||||||    
T  34749996 tcatctct 34750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 53638316 - 53638277
Alignment:
Q  109 atataggaaaaagatagatagacatccttttttatacacc 148  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  53638316 atataggaaaaagatagatagacatcctcttttatacacc 53638277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 46111943 - 46112049
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| | ||||| ||||||||   || |||| || ||||| |||||||||||||| |||||| |||||| ||| |||| | ||||    
T  46111943 ggaaaaagataggtagacaccatttttcatacaccttttatatacatccccatgtattaggggtattttagtaattttacatcatatcatcacccttttt 46112042  T
Q  213 catctct 219  Q
    |||||||    
T  46112043 catctct 46112049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 30735494 - 30735587
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggta-ttttaataatttcacatcacatcgtcac 205  Q
    ||||||||||||| |||||| ||||||| ||||||| |  || |||||  ||||||||||||||| ||||| |||||| |||||| ||| ||||    
T  30735494 aggaaaaagataggtagacaccctttttcatacaccacttatgtacactccatgtgttaggggtatttttagtaatttaacatcatatcatcac 30735587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 20856153 - 20856220
Alignment:
Q  114 ggaaaaagatagatagacatcctttt-ttatacacctcccatctacacctcatgtgttaggggtattt 180  Q
    ||||||||||||| | ||||| |||| ||||||||||| ||| |||||| ||||||| ||||||||||    
T  20856153 ggaaaaagatagacaaacatctttttgttatacacctctcatgtacaccccatgtgtcaggggtattt 20856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 4300544 - 4300629
Alignment:
Q  115 gaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatc 200  Q
    ||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  4300544 gaaaaagattgatagacatccttttttatacatctctcatgtacacctcatgtgttagggatattttaataatttcacatcacatc 4300629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 31800750 - 31800646
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||||  ||||| ||||||| |||||||||   | |||||| ||| |||||||||||||||| |||||| |||||| ||| |||| ||||||    
T  31800750 aggaaaaagataggcagacaccctttttcatacacctcttgtgtacaccccatatgttaggggtattttagtaattttacatcatatcatcacccctttt 31800651  T
Q  213 catct 217  Q
    |||||    
T  31800650 catct 31800646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 42683792 - 42683708
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatca 196  Q
    |||||||||||||||||||||||||||| |||||||||  || |||| || ||| | |||||||||||||| |||||| ||||||    
T  42683792 aggaaaaagatagatagacatcctttttcatacacctcttatgtacacccccatatattaggggtattttagtaattttacatca 42683708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 13347320 - 13347216
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| ||||||| |||||| ||  || |||||| |||||| |||||||||||| | |||||  |||||| ||| |||||| ||||    
T  13347320 ggaaaaagataggtagacaccctttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcactcttttt 13347221  T
Q  213 catct 217  Q
    |||||    
T  13347220 catct 13347216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 27553372 - 27553455
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatca 196  Q
    ||||||||| ||||||||||| ||||||| |||||||||  || ||||||  |||||||||| |||||||| |||||| ||||||    
T  27553372 taggaaaaa-atagatagacaccctttttcatacacctcttatgtacaccctatgtgttaggagtattttagtaattttacatca 27553455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 1815666 - 1815721
Alignment:
Q  164 atgtgttaggggtattttaataatttcacatcacatcgtcactccttttcatctct 219  Q
    ||||||||||||||||||| |||||| |||||| ||| |||| |||||||||||||    
T  1815666 atgtgttaggggtattttagtaattttacatcatatcatcaccccttttcatctct 1815721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 39371119 - 39371013
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| ||||||| |||||| ||  || |||||| | |||| |||||||||||| | |||||| |||||| ||| |||| | ||||    
T  39371119 ggaaaaagataggtagacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 39371020  T
Q  213 catctct 219  Q
    |||||||    
T  39371019 catctct 39371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 17225451 - 17225403
Alignment:
Q  171 aggggtattttaataatttcacatcacatcgtcactccttttcatctct 219  Q
    |||||||||||| ||||||||||||||||| ||||  ||||||||||||    
T  17225451 aggggtattttagtaatttcacatcacatcatcacctcttttcatctct 17225403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 14831737 - 14831630
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| || ||| ||||||| |||||| ||  || |||||| | | || |||||||||||| |||||||| |||||| ||| |||| | |||    
T  14831737 aggaaaaagataggtaaacaccctttttcatacacttcttatgtacacccctacgtattaggggtatttgaataattttacatcatatcatcaccctttt 14831638  T
Q  212 tcatctct 219  Q
    ||||||||    
T  14831637 tcatctct 14831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 40887940 - 40888047
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||| ||||||| |||||||||  || |||| || ||| | |||| ||||||||| |||||| |||||| |||  ||| | |||    
T  40887940 aggaaaaagataggtagacaccctttttcatacacctcttatgtacacccccatctattagaggtattttagtaattttacatcatatcaccaccctttt 40888039  T
Q  212 tcatctct 219  Q
    ||||||||    
T  40888040 tcatctct 40888047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 2237468 - 2237362
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| ||||||| |||||| ||  || |||||| | | || |||||||||||| | |||||| |||||| ||| |||| | ||||    
T  2237468 ggaaaaagataggtagacaccctttttcatacacttcttatgtacacccccaagtattaggggtatttgagtaattttacatcatatcatcacccttttt 2237369  T
Q  213 catctct 219  Q
    |||||||    
T  2237368 catctct 2237362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 19596067 - 19596153
Alignment:
Q  114 ggaaaaagatagatagacatcctttttt-atacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacat 199  Q
    |||||||||||| ||||||||||||||| | | |||||  || |||||| ||||||| ||||||| |||| | ||||||||| ||||    
T  19596067 ggaaaaagataggtagacatccttttttgaaatacctcttatgtacaccccatgtgtcaggggtagtttagtcatttcacattacat 19596153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 19258674 - 19258777
Alignment:
Q  116 aaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttttcat 215  Q
    |||||||||| |||||| ||||||||||||| ||| ||| |||||| |||||||||||  |||||||||||||||||||||||||  ||| |||||||||    
T  19258674 aaaaagataggtagacacccttttttatacatctctcatgtacaccccatgtgttaggaatattttaataatttcacatcacatcaccaccccttttcat 19258773  T
Q  216 ctct 219  Q
    ||||    
T  19258774 ctct 19258777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 28647551 - 28647441
Alignment:
Q  107 aaatataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcact 206  Q
    ||||| ||||||||||||| |||||| ||||||||||||| ||| ||| |||| | |||||||||||  |||||||||||||||||||||||||  |||     
T  28647551 aaataaaggaaaaagataggtagacacccttttttatacatctctcatgtacatcccatgtgttaggaatattttaataatttcacatcacatcaccacc 28647452  T
Q  207 ccttttcatct 217  Q
    |||||||||||    
T  28647451 ccttttcatct 28647441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 215
Target Start/End: Original strand, 34307130 - 34307239
Alignment:
Q  107 aaatataggaaaaagatagatagacatccttttttatacacctcccatctacac-ctcatgtgttaggggtattttaataatttcacatcacatcgtcac 205  Q
    ||||| ||||||||||||| |||||| | ||||| |||||||||  || ||||| | |||||||||||||||||||| |||||| |||||| ||| ||||    
T  34307130 aaataaaggaaaaagataggtagacaccttttttcatacacctcttatgtacactcccatgtgttaggggtattttagtaattttacatcatatcatcac 34307229  T
Q  206 tccttttcat 215  Q
     | |||||||    
T  34307230 cctttttcat 34307239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 2509217 - 2509110
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| ||||||   ||||| |||||||||  || |||||| |||||| |||||| ||||||| |||||| |||||| |||  ||| | |||    
T  2509217 aggaaaaagataggtagacactttttttcatacacctcttatgtacaccctcatgtattagggatattttagtaattttacatcatatcaccaccctttt 2509118  T
Q  212 tcatctct 219  Q
    ||||||||    
T  2509117 tcatctct 2509110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 46901727 - 46901840
Alignment:
Q  107 aaatataggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcac 205  Q
    ||||| ||||||||||||| |||||||||||||| |||||  ||  || ||||||  ||||| | ||| |||||| | |||||| |||||| ||| ||||    
T  46901727 aaataaaggaaaaagataggtagacatcctttttcatacatttcttatgtacaccgccatgtatcaggagtatttgagtaattttacatcatatcatcac 46901826  T
Q  206 tccttttcatctct 219  Q
     | |||||||||||    
T  46901827 cctttttcatctct 46901840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 44275904 - 44275792
Alignment:
Q  107 aaatataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcact 206  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||  || |||||| |||||||||||||||||||| |||||| |||||| ||| ||||     
T  44275904 aaataaaggaaaaagatagatagacaccctttttcatacacctcttatgtacaccccatgtgttaggggtattttagtaattttacatcatatcatcacc 44275805  T
Q  207 ccttttcatctct 219  Q
    | |||| ||||||    
T  44275804 ctttttaatctct 44275792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 219
Target Start/End: Original strand, 21390955 - 21391060
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttttc 213  Q
    |||||||||||| |||||| ||||||| ||||||||   || ||||||||||||||||||||||||||| |||||| |||||| ||  |||||| |||||    
T  21390955 ggaaaaagataggtagacaccctttttcatacaccttttatgtacacctcatgtgttaggggtattttagtaattttacatcatatattcactcattttc 21391054  T
Q  214 atctct 219  Q
    ||||||    
T  21391055 atctct 21391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 46192551 - 46192445
Alignment:
Q  114 ggaaaaagatagatagacatcctttttt-atacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||||| |||||||| |||||||||  || |||||| |||||   |||||||||||||| ||||||||||||||  |||| ||||||    
T  46192551 ggaaaaagataggtagacacccttttttgatacacctcttatgtacaccccatgtaccaggggtattttaatcatttcacatcacattatcacccctttt 46192452  T
Q  213 catctct 219  Q
     ||||||    
T  46192451 tatctct 46192445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 52191200 - 52191286
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatc 200  Q
    |||||||||| || ||||| ||||||||||||||||| | | |||||| ||| ||||||| |||||||| ||||||| |||||||||    
T  52191200 ggaaaaagattgaaagacacccttttttatacacctctcgtgtacaccccatatgttaggagtattttagtaatttcgcatcacatc 52191286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 49244006 - 49243901
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttttc 213  Q
    |||||||||||  |||||||||||||| |||||||||  || |||||  ||||| |||||||||||||| |||||| |||||| ||| |||||  ||||     
T  49244006 ggaaaaagatatgtagacatcctttttcatacacctcttatgtacactccatgtattaggggtattttagtaattttacatcatatcatcactttttttt 49243907  T
Q  214 atctct 219  Q
    ||||||    
T  49243906 atctct 49243901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 28093094 - 28093202
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctaca-cctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||||||||||| |||||| ||  || |||| || ||||| |||||||||||| | || ||| |||||| ||| |||| | |||    
T  28093094 aggaaaaagataggtagacatcctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtatttttacatcatatcatcaccctttt 28093193  T
Q  212 tcatctctc 220  Q
    |||||||||    
T  28093194 tcatctctc 28093202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Complemental strand, 7217958 - 7217851
Alignment:
Q  113 aggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| || ||| ||||||| |||||||||  || |||||| ||||||||||  ||||||||| |||||| |||||| ||| |||| | |||    
T  7217958 aggaaaaagataggtaaacaccctttttcatacacctcttatgtacaccctcatgtgttataggtattttagtaattttacatcatatcatcaccctttt 7217859  T
Q  212 tcatctct 219  Q
    | ||||||    
T  7217858 ttatctct 7217851  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 45829256 - 45829362
Alignment:
Q  113 aggaaaaagatagatagacatcctttttt-atacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactccttt 211  Q
    ||||||||||||| |||||| |||||||| ||||||||   || |||||| ||| ||  |||||||||||||| ||||||||||||||  |||| |||||    
T  45829256 aggaaaaagataggtagacacccttttttgatacaccttt-atgtacaccccatatgccaggggtattttaatcatttcacatcacattatcaccccttt 45829354  T
Q  212 tcatctct 219  Q
    | ||||||    
T  45829355 ttatctct 45829362  T

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Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 25436922 - 25437008
Alignment:
Q  115 gaaaaagatagatagacatccttttttatacacctcccatctacacctc-atgtgttaggggtattttaataatttcacatcacatc 200  Q
    ||||||||||| |||| | | ||||||||||| ||| ||| |||||||  || |||| | |||||||||||||||||||||||||||    
T  25436922 gaaaaagataggtagataccattttttatacatctctcatatacacctttatatgtttgaggtattttaataatttcacatcacatc 25437008  T

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Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 35545102 - 35545005
Alignment:
Q  116 aaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggta-ttttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||| |||||| ||||||| ||||||| |  || |||||  ||||||||||||||| ||||| |||||| |||||| ||| |||| ||||||    
T  35545102 aaaaagataggtagacaccctttttcatacaccacttatgtacactccatgtgttaggggtatttttagtaattttacatcatatcatcacccctttt 35545005  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 6112824 - 6112716
Alignment:
Q  111 ataggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataatttcacatcacatcgtcactcctt 210  Q
    ||||||||||||||| ||||||  |||||| |||||| ||  || |||||  ||||| |||||||||||| | |||||| |||||| ||| |||  | ||    
T  6112824 ataggaaaaagataggtagacactctttttcatacacttcttatgtacactccatgtattaggggtatttgagtaattttacatcatatcatcatccttt 6112725  T
Q  211 ttcatctct 219  Q
    |||||||||    
T  6112724 ttcatctct 6112716  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 219
Target Start/End: Complemental strand, 3672466 - 3672360
Alignment:
Q  114 ggaaaaagatagatagacatccttttttatacacctcccatctacacc-tcatgtgttaggggtattttaataatttcacatcacatcgtcactcctttt 212  Q
    |||||||||||| |||| | ||||||| |||||| ||  || |||||| |||||| |||||||||||| | |||||  |||||| ||| |||| | ||||    
T  3672466 ggaaaaagataggtagataccctttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcacccttttt 3672367  T
Q  213 catctct 219  Q
    |||||||    
T  3672366 catctct 3672360  T

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Target: scaffold0043 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 87160 - 87237
Alignment:
Q  112 taggaaaaagatagatagacatccttttttatacacctcccatctacacctcatgtgttaggggtattttaataattt 189  Q
    |||||||||||||| |||||| | ||||| ||||||||   || |||||| |||||||||||||||||||| ||||||    
T  87160 taggaaaaagataggtagacaccttttttcatacaccttttatgtacaccccatgtgttaggggtattttagtaattt 87237  T

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