View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10914_high_5 (Length: 388)
Name: NF10914_high_5
Description: NF10914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10914_high_5 |
 | |
|
| [»] scaffold0157 (1 HSPs) |
| | |
|
| [»] scaffold0015 (1 HSPs) |
| | |
|
| [»] scaffold0024 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 363
Target Start/End: Original strand, 44475392 - 44475740
Alignment:
| Q |
18 |
atacaacgatggctaccctcctgtaacattcaacttcaactacttaattcctttcggcgttccctctggcatctataattgcaataaataagtttttatg |
117 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44475392 |
atacaacgatggctaccctcctataacattcaacttcaactacttgattcctttcggcgttccctctggcatctataattgcaataaataagtttttatg |
44475491 |
T |
|
| Q |
118 |
ttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta------atgtatct--cgatt |
209 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
44475492 |
ttaattcgtaagttctcactaatgaaaattgtatcattgatcagaagttgttttttcataaactacattgataagcttatgaatcatttatctcgcgatt |
44475591 |
T |
|
| Q |
210 |
catcaaagaatataatgatagctaatgagtttctacatttatttggcgtcaaataacacatattgctttcgataaaccgatgacaatgttgatttgctgt |
309 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44475592 |
catcaaag-----aatgatagctaatgagtttctgcatttatttagcgtcaaataacacatattgctttcgataaaccgatgacaatgttgatttgctgt |
44475686 |
T |
|
| Q |
310 |
annnnnnnctcaatcaaaccattcagcccgtgtaattatttttcttcaactttg |
363 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44475687 |
atttttttctcaatcaaaccattcagcccgtgtaattatttttcttcaactttg |
44475740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 7480854 - 7480906
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
7480854 |
aataaataagtttttatgttaattcataagttctgactaatgaaaattgtatc |
7480906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 4027056 - 4026964
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| | |||||||||||| |||||||||||||| |||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
4027056 |
aataaataagctattatgttaattcataagttctcactaacaaaaattgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
4026964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 44485613 - 44485681
Alignment:
| Q |
30 |
ctaccctcctgtaacattcaacttcaactacttaattcctttcggcgttccctctggcatctataattg |
98 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||| || |||||||| || ||| ||||||| |
|
|
| T |
44485613 |
ctaccctcctgttacattcaacttcaactacttcattccttcgggtgttccctccggtatcaataattg |
44485681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 8832588 - 8832536
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||||||| ||||||||||| |
|
|
| T |
8832588 |
aataaataagcttttatgttaattcataagttttcactaacgaaaattgtatc |
8832536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 23956219 - 23956271
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||| ||||||||||| |
|
|
| T |
23956219 |
aataaataagtttttatgttaatttataagttctcattaacgaaaattgtatc |
23956271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 38216150 - 38216098
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||| || |||||||||||||| ||||||||||| |
|
|
| T |
38216150 |
aataaataagcttttatgttaactcataagttctcactaacgaaaattgtatc |
38216098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 736094 - 736043
Alignment:
| Q |
101 |
ataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||| ||||||| |||| |
|
|
| T |
736094 |
ataaataagtttttatgttaatttataagttctcaataacaaaaattatatc |
736043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 29774876 - 29774825
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||||||| |||||||||| |
|
|
| T |
29774876 |
aataaataagcttttacgttaattcataagttctcactaacgaaaattgtat |
29774825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 887543 - 887491
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
887543 |
aatagataagcttttatgttaattcataagttcttgctaatgaaaattgtatc |
887491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 11777115 - 11777063
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||| || |||||||||||||| ||||| |||||| |
|
|
| T |
11777115 |
aataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatc |
11777063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 35235236 - 35235200
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcac |
136 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
35235236 |
aataaataagattttatgttaattcataagttctcac |
35235200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 488339 - 488431
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||| || | ||| ||||||||||||||||| |||| ||||||| |
|
|
| T |
488339 |
aataaataagcttttatgttaattcataagttctcactaataaaaattgtatcttt----acaagcaattttttcataaactaccttgacaagctta |
488431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 36254992 - 36255043
Alignment:
| Q |
101 |
ataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
36254992 |
ataaataagcttttatgttaattcataagttctcactaattaaaattgtatc |
36255043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 38345777 - 38345861
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattga |
188 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| |||| |
|
|
| T |
38345777 |
aataaataagcttttatgttaattcataagttctggctaataaaaattgtatc----ttcataagttgttttttcataaactactttga |
38345861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 8130610 - 8130560
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
8130610 |
aataaataagtttttatgttaattcataagttttcactaacaaaaattgta |
8130560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 23335771 - 23335681
Alignment:
| Q |
102 |
taaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| || ||||||||||| ||| ||| | |||||||||||||||| |||||| ||||| |
|
|
| T |
23335771 |
taaacaagtttttatgttaattcataagttctcacttatgaaaattgtatc----ttcataagctgttttttcataaactaccttgatatgctta |
23335681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 12495599 - 12495651
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
12495599 |
aataaataagtttttatgttaatttataagttctcactaatgaatattgtatc |
12495651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 17222960 - 17222908
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
17222960 |
aataaataagtttttatgttaattcataagttctaactaacgaaaattgtatc |
17222908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 29877770 - 29877718
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
29877770 |
aatatataagcttttatgttaattcataagttctcactaacaaaaattgtatc |
29877718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 34633521 - 34633470
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
34633521 |
aataaataagcttttatgttaattcataagttctcacttatgaaaattgtat |
34633470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 43699404 - 43699455
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||| | |||||||||| |
|
|
| T |
43699404 |
aataaataagtttttatgttaattcataagttcccactagtgaaaattgtat |
43699455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 14987555 - 14987604
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt |
149 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
14987555 |
aataaataagtttttatattaattcataagttctcactaacgaaaattgt |
14987604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 32628898 - 32628857
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
32628898 |
ttttatgttaattcgtaagttctcactgatcaaaattgtatc |
32628857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 11256616 - 11256668
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
11256616 |
aataaataagcttttatgttaattcataagttctcgctaactaaaattgtatc |
11256668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 18424233 - 18424285
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||| ||| |||||||||||| |
|
|
| T |
18424233 |
aataaataagcttttatgttaattcataagttttcaataacaaaaattgtatc |
18424285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 22273911 - 22273859
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| |||||||||||||| ||| |||||||||| |||||||||||| |
|
|
| T |
22273911 |
aataaataaacttttatgttaattcataacttctcactaacaaaaattgtatc |
22273859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 23297566 - 23297514
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||||||| |||| |||||||||||| |
|
|
| T |
23297566 |
aataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatc |
23297514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 34526292 - 34526344
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
34526292 |
aataaataagcttttatgttaattcataagttctcactatggaaaattgtatc |
34526344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 36741035 - 36740983
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||| |||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
36741035 |
aataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatc |
36740983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 48687065 - 48687013
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| || ||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
48687065 |
aataaataaacttatatgttaattcataagttctcactaatgaaaattgtatc |
48687013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 48721951 - 48721899
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||||||||||| ||||||| |||| |
|
|
| T |
48721951 |
aataaataagcttttatattaattcataagttctcactaacaaaaattatatc |
48721899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 24101895 - 24101946
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| | ||||||||||| |
|
|
| T |
24101895 |
aataaataagtttttatgttaatttataagttctcacggacaaaaattgtat |
24101946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 29615486 - 29615439
Alignment:
| Q |
105 |
ataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||| ||||||| |||||| |||||||||||||| |||||||||||| |
|
|
| T |
29615486 |
ataagcttttatgctaattcttaagttctcactaacaaaaattgtatc |
29615439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 33534055 - 33534008
Alignment:
| Q |
104 |
aataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||| |||||||||| |
|
|
| T |
33534055 |
aataagtttttatgttagttcataagttctcactaacgaaaattgtat |
33534008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 41229034 - 41228942
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
||||||| || |||||| ||||||| |||||||| |||||| ||||||||||| || ||| |||| |||||||||||||||| || | ||||||| |
|
|
| T |
41229034 |
aataaattagcttttatattaattcataagttctaactaatgaaaattgtatc-ttcatc---agttgttttttcataaactaccttaacaagctta |
41228942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 15184674 - 15184625
Alignment:
| Q |
103 |
aaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
15184674 |
aaataagtttttattttaatttataagttctcactaacgaaaattgtatc |
15184625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 825813 - 825761
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||| | ||||||| ||||| |||||| |
|
|
| T |
825813 |
aataaataagattttatgttaattcataagctttcactaacaaaaaatgtatc |
825761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 23284746 - 23284798
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||||||||| ||||||||||| |
|
|
| T |
23284746 |
aataaataagtttttattttaatttataagctctcactaacgaaaattgtatc |
23284798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 46704225 - 46704277
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||| ||| ||||||| ||||||| ||||||||||||||| |||||| |||| |
|
|
| T |
46704225 |
aataagtaactttttatattaattcataagttctcactaatgaaaattttatc |
46704277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 48591379 - 48591431
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||| ||| ||||||||||| |
|
|
| T |
48591379 |
aataaataagcttttacgttaattcataagttctcattaacgaaaattgtatc |
48591431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 32675844 - 32675920
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaac |
180 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
32675844 |
aataaataagtttttatattaattcataagttctcactaatgaaaattgtatc----ttcataagttattttttcataaac |
32675920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 9202354 - 9202406
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
9202354 |
aataaataagcttttatgttaattcataagttatcactaataaaaattgtatc |
9202406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 7267913 - 7267876
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcact |
137 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
7267913 |
aataaataagcttttatgttaattcgtaagttctcact |
7267876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 2255865 - 2255813
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||| |||||||||||| |
|
|
| T |
2255865 |
aataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatc |
2255813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 6758759 - 6758666
Alignment:
| Q |
100 |
aataaataag-tttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| ||||||| ||||||| |||||||||||||| ||| ||||||| ||||| |||||| ||||||||||||||| || | ||||||| |
|
|
| T |
6758759 |
aataaataagctttttatattaattcataagttctcactaacgaaatttgtatc-ttgat---aagttaatttttcataaactaccttaacaagctta |
6758666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 9201676 - 9201715
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
9201676 |
aataaataagcttttatgttaattcataagttctcactaa |
9201715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 2040136 - 2040186
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| |||||| ||||||||| |
|
|
| T |
2040136 |
aataaataagtttttatattaatttataagttctaactaatgaaaattgta |
2040186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 10755238 - 10755292
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcat |
154 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| |
|
|
| T |
10755238 |
aataaataagcttttatgttaattcataagttcttactaacgaaaattgtttcat |
10755292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 6752943 - 6752891
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| ||||||| ||| | ||||||||| ||||||||||| |
|
|
| T |
6752943 |
aataaataagcttttatattaattcataaatcctcactaatgaaaattgtatc |
6752891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 10054510 - 10054458
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||| | ||||||| ||||| |||||||| ||||||| ||||||||||| |
|
|
| T |
10054510 |
aataaataggcttttatgctaatttgtaagttcccactaatgaaaattgtatc |
10054458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 10874115 - 10874063
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| |||| || ||||||||||| |
|
|
| T |
10874115 |
aataaataagcttttatgttaattcataagttttcaccaactaaaattgtatc |
10874063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 23239378 - 23239326
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||||||||||| ||| ||||||| |
|
|
| T |
23239378 |
aataaataagcttttatattaattcataagttctcactaaggaaagttgtatc |
23239326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 32165216 - 32165268
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||||||||| ||||||||||| |
|
|
| T |
32165216 |
aataaataagtttttattttaatttataagctctcactaacgaaaattgtatc |
32165268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 35071383 - 35071419
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcac |
136 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
35071383 |
aataaataagcttttatgttaattcataagttctcac |
35071419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 35111305 - 35111357
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
35111305 |
aataaataaacttttatcttaattcgtaagttctcgctaacgaaaattgtatc |
35111357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 46744084 - 46744032
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
46744084 |
aataaataagcttttatgttaattcgtaagttctcactaacgaaaattgtatc |
46744032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 43818833 - 43818883
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |
|
|
| T |
43818833 |
aataaataagtttttatcttaattcataagttctcactaatgaaaattgta |
43818883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 44613428 - 44613520
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||||| | |||||||||||||||| ||| ||||| |||||||||||||||| || | ||||||| |
|
|
| T |
44613428 |
aataaataagcttttatattaattcataagttctaattaataaaaattgtatc----gtcataagttgttttttcataaactaccttaacaagctta |
44613520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 47654369 - 47654419
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| ||||||||| |
|
|
| T |
47654369 |
aataaataagtttttatcttaattcataagttctcactaacgaaaattgta |
47654419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 33288030 - 33288082
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |||| |||||| |
|
|
| T |
33288030 |
aataaataagtttttatgttaattcataagttttcactaacgaaaactgtatc |
33288082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 14691254 - 14691346
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||| |||||| |||| ||| || || |||||||||||| |||||||| ||||||| |
|
|
| T |
14691254 |
aataaataaccttttatgttaattcataagttctcactaacgaaaattatatc----ttcataaattgttttttcataaattacattgacaagctta |
14691346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 33204965 - 33204926
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
33204965 |
aataaataagcttttatgttaattcataagttctcactaa |
33204926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 22032893 - 22032843
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
22032893 |
aataaataagtttttatcttaatttataagttctcactaacgaaaattgta |
22032843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 23356447 - 23356497
Alignment:
| Q |
101 |
ataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
||||||||| |||||||||||||| || ||||||||||| |||||| |||| |
|
|
| T |
23356447 |
ataaataagcttttatgttaattcataggttctcactaacaaaaatagtat |
23356497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 48021605 - 48021655
Alignment:
| Q |
102 |
taaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||| ||||||| ||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
48021605 |
taaataattttttatattaattcataagttttcactaatgaaaattgtatc |
48021655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 49104323 - 49104369
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaat |
146 |
Q |
| |
|
||||||||| ||||||||||||||| ||| |||||||| |||||||| |
|
|
| T |
49104323 |
aataaataaatttttatgttaattcataaattctcactcataaaaat |
49104369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 30181681 - 30181636
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaa |
145 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| ||||||| |||| |
|
|
| T |
30181681 |
aataaataagcttttatgttaattcataagttcccactaatgaaaa |
30181636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 38372689 - 38372640
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt |
149 |
Q |
| |
|
||||||| || |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
38372689 |
aataaatcagcttttatgttaattcataagttctcactaacgaaaattgt |
38372640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 1401204 - 1401152
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||| | ||||| |||||| |
|
|
| T |
1401204 |
aataaataagcttttatgttaattcataagttcttacttacaaaaagtgtatc |
1401152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 29378776 - 29378724
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
29378776 |
aataaataagcttttacgttaattcataagttcttactaacgaaaattgtatc |
29378724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 34923064 - 34923012
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||| ||| |||||||||||||| |||| |||||| |
|
|
| T |
34923064 |
aataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatc |
34923012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 33)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 1576750 - 1576669
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
1576750 |
ttttatgttaattcttaagttctcactaacaaaaattgtatc----ttcacaagttgtttttccataaactacattgacaagctta |
1576669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 1608065 - 1608146
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
1608065 |
ttttatgttaattcttaagttctcactaacaaaaattgtatc----ttcacaagttgtttttccataaactacattgacaagctta |
1608146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 41419632 - 41419540
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
41419632 |
aataaataagtttttatgttaattgataagttctcactaacgaaaattgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
41419540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 29659191 - 29659141
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |
|
|
| T |
29659191 |
aataaataagtttttatcttaattcataagttctcactaatgaaaattgta |
29659141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 1943126 - 1943074
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
1943126 |
aataaataagcttttatgctaattcataagttctcactaatgaaaattgtatc |
1943074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 11912057 - 11912109
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
11912057 |
aataaataagctttcatgttaattcataagttctcactaacaaaaattgtatc |
11912109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 24030345 - 24030293
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
24030345 |
aataaataagcttttatgttaattcataagttctcactaacgaaaattgtatc |
24030293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 28357483 - 28357435
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattg |
148 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
28357483 |
aataaataagtttttatcttaattcgtaagttctcactaacgaaaattg |
28357435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 43268591 - 43268643
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
43268591 |
aataaataagcttttatgttaatttataagttctcactaacaaaaattgtatc |
43268643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 28625611 - 28625519
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
28625611 |
aataaataagcttttatgttaattcataggttctcactaacgaaaattgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
28625519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 42852150 - 42852101
Alignment:
| Q |
102 |
taaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
42852150 |
taaataagcttttatgttaattcataagttctcactaacgaaaattgtat |
42852101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 6150912 - 6150872
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
6150912 |
ttttatgttaattcgtaagttctcagtaacaaaaattgtat |
6150872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 7364264 - 7364316
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
7364264 |
aataaataagcttttatattaattcataagttctcactaacaaatattgtatc |
7364316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 11163237 - 11163289
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
11163237 |
aataaataagcttttatgttaattcataagttcgcactaacgaaaattgtatc |
11163289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 23087736 - 23087784
Alignment:
| Q |
102 |
taaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||| ||||||||| ||||||| |||||||||||||| |||||||||| |
|
|
| T |
23087736 |
taaattagtttttatattaattcataagttctcactaacaaaaattgta |
23087784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 39154716 - 39154764
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattg |
148 |
Q |
| |
|
|||||||||| |||| ||||||||| |||||||||| |||||||||||| |
|
|
| T |
39154716 |
aataaataagcttttgtgttaattcataagttctcaataataaaaattg |
39154764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 41059744 - 41059792
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattg |
148 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
41059744 |
aataaataagcttttatgttaattcataagttctcactaacgaaaattg |
41059792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 10274431 - 10274384
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaatt |
147 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| ||||||| |
|
|
| T |
10274431 |
aataaataagtttttatgataattcgtaagttctctttaacaaaaatt |
10274384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 13060557 - 13060596
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
13060557 |
aataaataagcttttatgttaattcataagttctcactaa |
13060596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 29922144 - 29922195
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
|||||||||| |||||| ||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
29922144 |
aataaataagcttttatattaattcataagctctcactaaaaaaaattgtat |
29922195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 35083370 - 35083323
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaatt |
147 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||| || |||||| |
|
|
| T |
35083370 |
aataaataagcttttatgttaattcataagttctcactgatgaaaatt |
35083323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 9477467 - 9477417
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||| ||| ||||||||| |
|
|
| T |
9477467 |
aataaataagtttttatcttaattcataagttctcagtaacgaaaattgta |
9477417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 10537192 - 10537234
Alignment:
| Q |
110 |
tttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
10537192 |
tttttatgttaattcataagttctcactaacgaaaattgtatc |
10537234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 41125805 - 41125752
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa-taaaaattgtatc |
152 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
41125805 |
aatatataagcttttatgttaattcataagttctcactaactaaaatttgtatc |
41125752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 43319132 - 43319095
Alignment:
| Q |
102 |
taaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
43319132 |
taaataagtttttatcttaattcataagttctcactaa |
43319095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 2577383 - 2577435
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa-taaaaattgtat |
151 |
Q |
| |
|
||||||||| || |||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
2577383 |
aataaataaattgttatgttaattcataagttctcactaacgaaaaattgtat |
2577435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 2878632 - 2878684
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
2878632 |
aataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatc |
2878684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 3977604 - 3977560
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaa |
144 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||| |||| |
|
|
| T |
3977604 |
aataaataagcttttatgttaattcatacgttctcactaacaaaa |
3977560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 5559874 - 5559926
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||| ||||| ||| |||||||||| ||||||||||| |
|
|
| T |
5559874 |
aataaataagcttttatgtaaattcataaattctcactaacgaaaattgtatc |
5559926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 17657373 - 17657321
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
17657373 |
aataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatc |
17657321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 27806046 - 27805994
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| ||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
27806046 |
aataaataaacttttatgttaatttataagttttcactaacaaaaattgtatc |
27805994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 40697137 - 40697085
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||| || |||||||||||| |
|
|
| T |
40697137 |
aataaataagcttttatgttaattcataagttttcaggaacaaaaattgtatc |
40697085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 41534760 - 41534724
Alignment:
| Q |
103 |
aaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||| |
|
|
| T |
41534760 |
aaataagtttttatgttaattcatatgttctcactaa |
41534724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 34707668 - 34707720
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
34707668 |
aataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatc |
34707720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 20685916 - 20685834
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacatt |
186 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||| ||||| |||||| |||||||||||| |
|
|
| T |
20685916 |
aataaataagtttttatgataattcacaagttctcactaatgaaaattgtatc----ttcataagttgttttttgataaactacatt |
20685834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 1516053 - 1516105
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |
|
|
| T |
1516053 |
aataaataagtttttattttaatttataagttctcactaatgaaaattgtatc |
1516105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 42956134 - 42956186
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
42956134 |
aataaataagtttttatgttaatttataagttctcactaacgaaaattgtatc |
42956186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 40581031 - 40581080
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt |
149 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
40581031 |
aataaataagattttatgttaattcataagttctcactaacgaaaattgt |
40581080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 3870192 - 3870273
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||||||| |||||||||| |||| |||| |||||||| || | ||| |||||||||||||||| |||| ||||||| |
|
|
| T |
3870192 |
ttttatgttaattcataagttctcattaatgaaaagtgtatcat----catatgttgttttttcataaactaccttgacaagctta |
3870273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 29830594 - 29830646
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
29830594 |
aataaataagtttttattttaatttataagttctcactaacgaaaattgtatc |
29830646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 37778264 - 37778212
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| |||||| |||||||||||||| |||||||||||| |
|
|
| T |
37778264 |
aataaataagcttttattttaatttataagttctcactaacaaaaattgtatc |
37778212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 53787707 - 53787759
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||| ||| ||||||| |||| |
|
|
| T |
53787707 |
aataaataagtttttatcttaattcataagttctcaataacaaaaattatatc |
53787759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 10449108 - 10449069
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
10449108 |
aataaataagtttttatcttaattcataagttctcactaa |
10449069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 22809148 - 22809240
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||| ||||||||||| || || || || |||||||||||||||| |||| ||||||| |
|
|
| T |
22809148 |
aataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatc-ttcataagcag---ttttttcataaactaccttgacaagctta |
22809240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 40240532 - 40240611
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactac |
183 |
Q |
| |
|
|||||||||| |||||| ||||||| |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
40240532 |
aataaataagcttttatcttaattcataagctctcactaacgaaaattgtatc----ttcataagttgttttttcataaactac |
40240611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 52895360 - 52895410
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||| ||||||||| |
|
|
| T |
52895360 |
aataaataagcttttatgttaattcataaattctcactaacgaaaattgta |
52895410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 7124650 - 7124702
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| | ||| |||||||||||| |
|
|
| T |
7124650 |
aataaataagttttgatgttaattgataagttcttattaacaaaaattgtatc |
7124702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 29830717 - 29830765
Alignment:
| Q |
104 |
aataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||| |||||| |||||||||| ||| |||||||||||| |
|
|
| T |
29830717 |
aataagtttttattttaatttataagttctcagtaacaaaaattgtatc |
29830765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 3069808 - 3069901
Alignment:
| Q |
99 |
caataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||| | ||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
3069808 |
caataaataagcttttatgttaattcataagttctcactagtgaaaattgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
3069901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 48819430 - 48819338
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| ||||| |||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
48819430 |
aataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
48819338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 6337714 - 6337803
Alignment:
| Q |
103 |
aaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| |||| |||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
6337714 |
aaataagcttttatgttaattcataagttctcgctaacaaaaattgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
6337803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 22593362 - 22593414
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
22593362 |
aataaataagcttttatgttaatttataagttctcactaacaaaaattgtatc |
22593414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 28690135 - 28690083
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
28690135 |
aataaataagcttttatgttaattcagaatttctcactaataaaaattgtatc |
28690083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 15515302 - 15515394
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
15515302 |
aataaataagctttcatgttaattcataagttctcactaacgaaaattgtatc----ttcataagctcttttttcataaactaccttgacaagctta |
15515394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 41196665 - 41196757
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| ||||||||||||| ||| ||||||||| |||||||||||| ||| ||| | ||||||||||||||||||||| ||||||| |
|
|
| T |
41196665 |
aataaataagcctttatgttaattcacaagctctcactaacaaaaattgtatc----ttcataagctgttttttcataaactacattgacaagctta |
41196757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 14460996 - 14461048
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
14460996 |
aataaacaaatttttatgttaatttataagttctcactaatgaaaattgtatc |
14461048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 16888921 - 16888973
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||| || ||| ||||||||||| ||||||||||| |
|
|
| T |
16888921 |
aataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatc |
16888973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 41003518 - 41003466
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
41003518 |
aataaataaacttttatgttaattaataagttctcactaataaaaattatatc |
41003466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 41130125 - 41130073
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||||||| ||||||||||| |
|
|
| T |
41130125 |
aataaataagattttatgttaattcttaagtttgcactaatgaaaattgtatc |
41130073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 16708930 - 16708879
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtat |
151 |
Q |
| |
|
||||||||| ||||||||||||||| |||| ||| |||||| |||||||||| |
|
|
| T |
16708930 |
aataaataaatttttatgttaattcataagatcttactaatgaaaattgtat |
16708879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 12871432 - 12871482
Alignment:
| Q |
102 |
taaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||| |||| ||||| ||||| |
|
|
| T |
12871432 |
taaataagtttttatgttaattcataagttttcattaatgaaaatggtatc |
12871482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 391307 - 391254
Alignment:
| Q |
100 |
aataaataag-tttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
391307 |
aataaataagctttttatgttaattcataagttctcgctaacgaaaattgtatc |
391254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 9572739 - 9572784
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaa |
145 |
Q |
| |
|
|||||||||| |||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
9572739 |
aataaataagcttttatattaattcataagttctcactaacaaaaa |
9572784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 38781209 - 38781160
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt |
149 |
Q |
| |
|
|||||||| | |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
38781209 |
aataaatatgcttttatgttaattcataagttctcactaaccaaaattgt |
38781160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 1005471 - 1005419
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||| || ||| |||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
1005471 |
aataaatgagctttgatgttaattcataagttctcactatcaaaaattgtatc |
1005419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 28870334 - 28870286
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattg |
148 |
Q |
| |
|
|||||||||| ||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
28870334 |
aataaataagcttttatgttcattcataagttctcactaaagaaaattg |
28870286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 37329367 - 37329419
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
37329367 |
aataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatc |
37329419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 51477773 - 51477825
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||| ||| ||| ||| |||| |
|
|
| T |
51477773 |
aataaataagtgtttatgttaatttgtaagttctcagtaacaaatattatatc |
51477825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 24878 - 24826
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
24878 |
aataaataagtttttatgttaatttataagttctcactaatgaatattgtatc |
24826 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 32975818 - 32975726
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||||||| || |||||||||||| ||| ||||| | |||||||||||||| |||| ||||||| |
|
|
| T |
32975818 |
aataaataagcttttatattaattcataagttctcacaaacaaaaattgtatc----ttcataagttgtgttttcataaactaccttgacaagctta |
32975726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 14262454 - 14262378
Alignment:
| Q |
103 |
aaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactac |
183 |
Q |
| |
|
|||||||||||||||||||||| |||| ||| ||||| ||||||||||| || ||| ||||| |||||||||||||||| |
|
|
| T |
14262454 |
aaataagtttttatgttaattcataagatcttactaacaaaaattgtat-at---tcataagttgttttttcataaactac |
14262378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 10213826 - 10213777
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt |
149 |
Q |
| |
|
|||||||||| || ||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
10213826 |
aataaataagcttgtatgttaattcataagttctcactaacaaaaattgt |
10213777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 8752937 - 8752885
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||| || |||| ||||||| |
|
|
| T |
8752937 |
aataaataagcttttatgttaattcataagttctcacaaacaaaatttgtatc |
8752885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 10298892 - 10298973
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||||||| |||||||||| ||| |||||||||||| ||| ||| | |||||||||||||||| |||| ||||||| |
|
|
| T |
10298892 |
ttttatgttaattcataagttctcattaacaaaaattgtatc----ttcataagctgttttttcataaactaccttgacaagctta |
10298973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 25333656 - 25333708
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||||||| ||||||||||| |
|
|
| T |
25333656 |
aataaataagcttttatgttaattcataagttttcactaacgaaaattgtatc |
25333708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 25465802 - 25465854
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| ||| ||| |||||||||||| |
|
|
| T |
25465802 |
aataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatc |
25465854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 28280840 - 28280796
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaa |
144 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| |||| |
|
|
| T |
28280840 |
aataaataagtttttatcttaattcataagttctcactaacaaaa |
28280796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 32131571 - 32131519
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||||||||||| | ||||||||||| |
|
|
| T |
32131571 |
aatagataagcttttatgttaattcataagttctcactattgaaaattgtatc |
32131519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 41145351 - 41145403
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||||| ||| ||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
41145351 |
aataaataagtttatatattaattcataagttctcactaatgaaaatcgtatc |
41145403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 139
Target Start/End: Original strand, 16926683 - 16926722
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaa |
139 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16926683 |
aataaataagtttttatgttaatttataagttctcactaa |
16926722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 24350474 - 24350566
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||| |||||| |||| ||| ||| |||||||||||||| ||| |||| ||||||| |
|
|
| T |
24350474 |
aataaataagattttatgttaattcataagttcttactaacgaaaattatatc----ttcataagctattttttcataaattacgttgacaagctta |
24350566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 38895790 - 38895698
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactacattgataagctta |
196 |
Q |
| |
|
||||||||||||||||| |||||| |||||| ||||||| ||| |||||||| ||| || ||||||||||||||||||| || | ||||||| |
|
|
| T |
38895790 |
aataaataagtttttatattaatttataagttttcactaacaaatattgtatc----ttcataaattattttttcataaactaccttaacaagctta |
38895698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 2563478 - 2563410
Alignment:
| Q |
111 |
ttttatgttaattcgtaagttctcactaataaaaattgtatcattgatcagaagttattttttcataaactac |
183 |
Q |
| |
|
|||||||||||||| |||| ||| ||||||||||||||||| || ||| ||||| |||||||||||||||| |
|
|
| T |
2563478 |
ttttatgttaattcataagatcttactaataaaaattgtat-at---tcaaaagttgttttttcataaactac |
2563410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 32212970 - 32213019
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgt |
149 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||||||| |||||||| |
|
|
| T |
32212970 |
aataaataagcttttatgttattttataagttctcactaatgaaaattgt |
32213019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 19925688 - 19925636
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
||||||||||| ||||| |||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
19925688 |
aataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatc |
19925636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 34286519 - 34286571
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
34286519 |
aataaataagcttttatattaattcataagttctccctaacgaaaattgtatc |
34286571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 35286059 - 35286007
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| ||| | |||||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
35286059 |
aataaataagctttcacgttaattcataagttctcgctactaaaaattgtatc |
35286007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 42363272 - 42363324
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgtatc |
152 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||| |||||||||||| |
|
|
| T |
42363272 |
aataaataagcttttattttaatttaaaagttctcactaacaaaaattgtatc |
42363324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 48583 - 48633
Alignment:
| Q |
100 |
aataaataagtttttatgttaattcgtaagttctcactaataaaaattgta |
150 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| || ||| |||||||||| |
|
|
| T |
48583 |
aataaataagcttttatgttaattcataagttcccattaacaaaaattgta |
48633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 97174 - 97218
Alignment:
| Q |
110 |
tttttatgttaattcgtaagttctcactaataaaaattgtatcat |
154 |
Q |
| |
|
|||| |||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
97174 |
ttttaatgttaattcataagttctcactaacgaaaattgtatcat |
97218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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