View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10914_high_9 (Length: 319)
Name: NF10914_high_9
Description: NF10914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10914_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 8778625 - 8778916
Alignment:
| Q |
18 |
tgttttgactcatgcctttaggaccccttagtattttccattaaattaatacaacaataaggaaataataatagtatgtatgacaagttgttgttattag |
117 |
Q |
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| T |
8778625 |
tgttttgactcatgcctttaggaccccttagtattttctattaaattaatacaacaa-aaggaaataataatagtatgtatgacaagttgttgttattag |
8778723 |
T |
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| Q |
118 |
agagaacatgaagtagtagaagttggatacaatgccaacggtgtagtaaaggaaagtgcacagtgttaggttgttttgagnnnnnnngacttttggtacc |
217 |
Q |
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|||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
8778724 |
agagaacatgaagtagtagaagatggatacaaagccaacgatgtagtaaaggaaagtgcacagtgttaggttgttttgagtttttttgacttttggtacc |
8778823 |
T |
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| Q |
218 |
attgattgtgtgtgtgctgtgttggtccctcccatccccagccataaggaaaggtaattagctgagagaatgaaagcagacagacctctctgc |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8778824 |
attgattgtgtgtgtgctgtgttggtccctcccatccccagccataaggaaaggtaattagctgagagaatgaaagcagacagacctctctgc |
8778916 |
T |
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