View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10914_low_14 (Length: 250)
Name: NF10914_low_14
Description: NF10914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10914_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 44254757 - 44254514
Alignment:
| Q |
1 |
atctttaatttgttccatgaactatgtaaacataatatcaacttcgtatttgaannnnnnnnnnnnnnncttctattttgaaaaagaccaattagaatca |
100 |
Q |
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| T |
44254757 |
atctttaatttgttccatgaactatgtaaacataatatcaacttcgtatttgaattttttttactttttcttctattttgaaaaagaccaattagaatca |
44254658 |
T |
|
| Q |
101 |
agttaatgaatcaaggtactatcttgatcaatcgaaaataatttagagataattatagttcaagaccacttagaagaaacag-tttaaggactaaatgga |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
44254657 |
agttaatgaatcaaggtactatcttgatcaatcgaaaataatttagagataattatagttcaagaccacttagaagaaacagttttaaggactaaatgga |
44254558 |
T |
|
| Q |
200 |
aaggtgtattcaaagttaatccaaactcggccttagtctctgct |
243 |
Q |
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||||||||||||||||||||||||| ||||||||||||| |||| |
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| T |
44254557 |
aaggtgtattcaaagttaatccaaattcggccttagtctttgct |
44254514 |
T |
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