View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10914_low_7 (Length: 374)
Name: NF10914_low_7
Description: NF10914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10914_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 28 - 321
Target Start/End: Complemental strand, 1194083 - 1193790
Alignment:
| Q |
28 |
aaaatatttacaaa-gtcatagtgcctttattgaaagagcaccaacaaaaacagaaaataaattaacaaggatgccaactatgtattttctaaatttttg |
126 |
Q |
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| T |
1194083 |
aaaatatttacaaaagtcatattgcctttattgaaagagcaccaacaaaaacagaaaataaattaacaaggatgccaactatgtattttctgaatttttg |
1193984 |
T |
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| Q |
127 |
gtt-atatatcgagaagtattaaattatttccattttgccatgaaaattttgcaaaattcatgcgcaattggacacatatccaacttgaaaaatataaaa |
225 |
Q |
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| T |
1193983 |
gtttatatatcgagaagtattaaattatttccattttgccatgaaaattttgcaa--ttcatgcgcaattggacacatatccaacatgaaaaatataaaa |
1193886 |
T |
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| Q |
226 |
tttgagnnnnnnncctttcaaatttgtcagctaaccaccaataattacaataaaccacaaaagaaacaggataatgcaagatttcttagattacta |
321 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1193885 |
tttgagtttttttcctttcaaatttgtcagctaaccaccaataattacaataaaccacaaaagaaacaggataatgcaagatttcttagattacta |
1193790 |
T |
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