View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10916_high_44 (Length: 215)
Name: NF10916_high_44
Description: NF10916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10916_high_44 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 20872162 - 20872346
Alignment:
| Q |
18 |
ctctgaacatcgataatcacatgcagcaccacattctgcaaaatgtgtaattaaaaggatgttattaatgtttactattttctagttttgctttaattac |
117 |
Q |
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| T |
20872162 |
ctctgaacatcgataatcacatgcagcaccacattctgcaaaatgtgtaattaaaaggatgttattaatgtttactattttctagttttgctttaattac |
20872261 |
T |
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| Q |
118 |
aagcagtaaaagagtttg-aatttatagaattaagtttggatctattaccttcttgaagaagtgatccctcataaccagcctatg |
201 |
Q |
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| T |
20872262 |
aagctgtaaaagagtttgaaatttatagaattaagtttggatctattaccttcttgaagaagtgatccctcataaccagcctatg |
20872346 |
T |
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