View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10918_high_6 (Length: 376)
Name: NF10918_high_6
Description: NF10918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10918_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 18 - 365
Target Start/End: Complemental strand, 34270025 - 34269678
Alignment:
| Q |
18 |
gtttgaagataagactccttcaaagcttgcatgtccatcgatggataccataccatatagtttgaaagctacaaattttaattaattaagctcacaaaat |
117 |
Q |
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| T |
34270025 |
gtttgaagataagactctttcaaagctcgcatgtccatcgatggataccataccatatagtttgaaagctacaaattttaattaattaagctcacaaaat |
34269926 |
T |
|
| Q |
118 |
tttattgggaccattaatttccattcacaattggcacaaaaactgatttttcaagataggcattggccatatatacaacaatatagttagacgttgacct |
217 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34269925 |
tttattgggaccattaatttccattcacaaatggcacaaaaactgatttttcaagataggcattggccatatatacaacaatatagttagacgttgacct |
34269826 |
T |
|
| Q |
218 |
ttgacaatagcaaaacagccaaatccaaattatcattgtactattgtatacacataagttaagaatgataagcatatagatagatactagtaacttctat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34269825 |
ttgacaatagcaaaacagccaaatccaaattatcattgtactattgtatacacataagttaagaatgataagcatatagatagatactagtaacttctat |
34269726 |
T |
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| Q |
318 |
ttcagaatcagtatctatatgtgtagctgagtgtgtatgtatgttctt |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34269725 |
ttcagaatcagtatctatatgtgtagctgagtgtgtatgtatgttctt |
34269678 |
T |
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