View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10920_high_7 (Length: 250)
Name: NF10920_high_7
Description: NF10920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10920_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 36653319 - 36653078
Alignment:
| Q |
1 |
aacacacatacaacacacatggatccaacactgttttcaaatcctgaaaaatttgatgcttcaaggtttgaaggagaagggccaacaccttattcatatg |
100 |
Q |
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| T |
36653319 |
aacacacatacaacacacatggatccaacactgttttcaaatcctgaaaaatttgatgcttcaaggtttgaaggagaagggccaacaccttattcatatg |
36653220 |
T |
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| Q |
101 |
ttccatttggaggaggacctagaatgtgtttgggacaagagtttgctcggttagagatacttgtttttatgcataatattgtgaaacgtttcaaatggga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36653219 |
ttccatttggaggaggacctagaatgtgtttgggacaagagtttgctcggttagagatacttgtttttatgcataatattgtgaaacgtttcaaatggga |
36653120 |
T |
|
| Q |
201 |
tttagttaatcctgatgagaagttcaagtatgatcctatgct |
242 |
Q |
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| T |
36653119 |
tttagttaatcctgatgagaagttcaagtatgatcctatgct |
36653078 |
T |
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