View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10920_low_10 (Length: 241)
Name: NF10920_low_10
Description: NF10920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10920_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 36653367 - 36653589
Alignment:
| Q |
1 |
atgatgacgtaatcaatatcctataatataaggttctctcctttagcacacataagtaaaaatatgttgaaacatgaaacataccttccatccactaggg |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36653367 |
atgatgacataatcaatatcctataatataaggttctctcctttagcacacataagtaaaaatatgttgaaacatgaaacataccttccatccactaggg |
36653466 |
T |
|
| Q |
101 |
atgttataatcagcataggtaaaatcctttatagcatctctgaatgcgccaccgacaggtggcgacagcctcagaacttcagaagcaacattccaagaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36653467 |
atgttataatcagcataggtaaaatcctttatagcatctctgaaagcgccaccgacaggtggcgacagcctcagaacttcagaagcaacattccaagaat |
36653566 |
T |
|
| Q |
201 |
atttcattttctgaatatcctcc |
223 |
Q |
| |
|
||||||||||||||||||||||| |
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|
| T |
36653567 |
atttcattttctgaatatcctcc |
36653589 |
T |
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