View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10922_high_1 (Length: 496)
Name: NF10922_high_1
Description: NF10922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10922_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 28 - 494
Target Start/End: Complemental strand, 44802183 - 44801721
Alignment:
| Q |
28 |
attaattaatgt-agcgaactttagcatttccagtcttagtattgacgagttactggaatataatgggatcataaattatcttacaaagttaaccgccat |
126 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
44802183 |
attaattaatgttagcgaactttagcatttccagtcttagtattgacgagttactggaatataatgggatcataaattatcttaaaaagttaaccgccat |
44802084 |
T |
|
| Q |
127 |
tgatacttggttgcaaatatcaccaagaccaggtgcccagccttatcctgaacttcattctgatgcttcgccaagctctttcatccatttgatatacaaa |
226 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44802083 |
tgatacttggttgcaaatatcacgaagaccaggtgcccagccttatcctgaacttcattctgatgcttcgccaagctctttcatccatttgatatacaaa |
44801984 |
T |
|
| Q |
227 |
tcacttcacttataaattgctcaacacctacaccttcattataaaacttcttactcaaattcataccccatcaaatcactttcaaatatgtgttagtcga |
326 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44801983 |
tcacttcacttataaattgctcaacacctacaccttcattataaaacttcttactcaaattcataccccatcaaatcactttcaaatatgtgttagtcga |
44801884 |
T |
|
| Q |
327 |
ttcatctaacatgttcaaattcaaattaactccactaaattatgtatgtgtgtcgcataaaatgaatgagaatnnnnnnntagtatatgttgaaacaaaa |
426 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
44801883 |
ttcatctaacatgttcaaattcaaattaactccactaaattatgtat--gtgtcgcataaaatgaatgagaataaaaaaatagtatatgttgaaacaaaa |
44801786 |
T |
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| Q |
427 |
attgtcgctagaataactataagcttaacaaaatcaaaatcattattaaccgcataccaagcttcatc |
494 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
44801785 |
attgtcgctagaataactataagcttaacaaaatcaaaatc---attaaccgcataccaagcttcatc |
44801721 |
T |
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