View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10922_high_2 (Length: 442)
Name: NF10922_high_2
Description: NF10922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10922_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 10 - 426
Target Start/End: Original strand, 32682716 - 32683132
Alignment:
| Q |
10 |
tggacatcattagaggaatttgtatttgctgcagtcaacaattcacgcattcgtacatcgttggatcgagatctgtctgtccagatattaagatggtatt |
109 |
Q |
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| T |
32682716 |
tggacatcattagaggaatttgtatttgctgcagtcaacaattcacgcattcgtacatcgttggatcgagatctgtctgtccagatattaagatggtatt |
32682815 |
T |
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| Q |
110 |
tcagnnnnnnnaaaatcaaatatgcattaaaagatgaactgtctaatcttgatccaactgtcacagatatctgactgcatcaatgcatagatttactgac |
209 |
Q |
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| T |
32682816 |
tcagtttttttaaaatcaaatatgcattaaaagatgaactgtctaatcttgatccaactgtcacagatgtctgactgcatcaatgcatagatttactgac |
32682915 |
T |
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| Q |
210 |
tacagcaaatccaaatcttagcacgtaaggattaacatctgcaaatgttaaatattactgaagtggtggaatacatctttggctggtaatagaatgagat |
309 |
Q |
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| T |
32682916 |
tacagcaaatccaaatcttagcacctaaggattaacatctgcaaatgttaaatattactgaagtggtggaatacatctttggctggtaatagaatgagat |
32683015 |
T |
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| Q |
310 |
gggtgggatagtgaattagtgatacagacaagcacagagtggattccgaaggaacggatgacactaattaaattgagggaggtttattggtcaacatttc |
409 |
Q |
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| T |
32683016 |
gggtgggatagtgaattagtgatacagacaagcacatagtggattctgaaggaacggatgacactaattaaattgagggaggtttattggtcaacatttc |
32683115 |
T |
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| Q |
410 |
tgcttagcgaaattcat |
426 |
Q |
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|||||| |||||||||| |
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| T |
32683116 |
tgcttaacgaaattcat |
32683132 |
T |
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