View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10922_low_8 (Length: 373)
Name: NF10922_low_8
Description: NF10922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10922_low_8 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 14 - 373
Target Start/End: Original strand, 18269935 - 18270294
Alignment:
| Q |
14 |
ggacatcaacctaatgataacaagcccaattttctgcaatatgaagacactgttgaagacaactacagtgaatcatggtggctagaagcgataaaagtag |
113 |
Q |
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| T |
18269935 |
ggacatcaaccgaatgataacaagcccaattttctgcaatatgaagacactgttgaagacaactacagtgattcatggtggctagaagcgataaaagtag |
18270034 |
T |
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| Q |
114 |
ttgaggaagtggagaataagaaaactgcaacagagctgtgcagcaaggttagtctgtcttaatttagctttcccttgttatcttgtttaacaataggact |
213 |
Q |
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| T |
18270035 |
ttgaggaagtggagaataagaaaactgcaacagagctatgcagcaaggttagtctgtcttaatttagctttcccttgttatcttgtttaacaataggact |
18270134 |
T |
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| Q |
214 |
gaagccctatcccctttatttagacggcataggagagtgtagtttcaaatacaatagattgtgctttgtttgattttaaaacaaacagggacctactttt |
313 |
Q |
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| T |
18270135 |
gaagccctatcccctttatttagacggcataggagagtgtagtttcaaatacaatagattgtgctttgtttgattttaaaacaaacagggacctactttt |
18270234 |
T |
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| Q |
314 |
aatctgttttgaactaaaggactaaattaaatttgaagtgaagttataagaattaaatgg |
373 |
Q |
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| T |
18270235 |
aatctgttttgaactaaaggactaaattaaatttgaagtgaagttataagaattaaatgg |
18270294 |
T |
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