View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10923_high_1 (Length: 1214)
Name: NF10923_high_1
Description: NF10923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10923_high_1 |
 | |
|
| [»] scaffold0515 (1 HSPs) |
| | |
|
| [»] scaffold0152 (2 HSPs) |
| | |
|
| [»] scaffold0055 (8 HSPs) |
| | |
|
| [»] scaffold0052 (8 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 1026; Significance: 0; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 1026; E-Value: 0
Query Start/End: Original strand, 18 - 1195
Target Start/End: Complemental strand, 2034255 - 2033084
Alignment:
| Q |
18 |
aatataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2034255 |
aatataaacataagaatacataaaacttgcctgcagaagatcaccgacatcaacaatgagagctccaggtacaggtgttatatcaatccatttgtcgtca |
2034156 |
T |
|
| Q |
118 |
tacagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggac |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2034155 |
tacagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttcctacagtcaattctggttcaggac |
2034056 |
T |
|
| Q |
218 |
aaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2034055 |
aaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaa |
2033956 |
T |
|
| Q |
318 |
taataaagtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaagaataagcagtcaatcagagagagaaaaaattatggattaaa |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2033955 |
taataaagtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaagaataagcagtcaatcagagagaaaaaaaattatggattaaa |
2033856 |
T |
|
| Q |
418 |
ttcagtttcatacttttcatagtttgtatcagttggtttttatactactatatgtgatttgtttcttataaatagacctttcatctcatgtgaaatagat |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2033855 |
ttcagtttcatacttttcatagtttgtatcagttggtttttatactactatatgtgatttgtttcttataaatagacctttcatctcatgtgaaatagat |
2033756 |
T |
|
| Q |
518 |
gcaattctagtgactatgaaaaggatatatcaaagctatttcaccgattaatacacctcaaaataaggatatgaaagcaatttcacaaatgaaaacacat |
617 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2033755 |
gcaattctagtgaatatgaaaaggatatatcaaagctatttcaccgattaatacacctcaaaataaggatatgaaagcaatttcacaaatgaaaacacat |
2033656 |
T |
|
| Q |
618 |
tttcttatatataagacaaaattagagatattagaaaaaggctaagcttgagtacgacttaaatacgcagcgaagtattgtaagttgtagagtggcctta |
717 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| |
|
|
| T |
2033655 |
tttcttatatataagacaaaattagagatattagaaaaag-----gcttgagtacgacttaaatacgctgcgaagtattgtaagtcgtagaatggcctta |
2033561 |
T |
|
| Q |
718 |
ctgccacgattcactgaaatttagtccttgttaagttgttacttcgactagtccnnnnnnnnnnnnngtggctaagtattggagacgatttcgacacatt |
817 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2033560 |
ctgccacgattcactgaaatttagtccttgttaagttgttacttcgactagtcc-aaaaaaaaaaaagtggctaagtattggagacgatttcgacacatt |
2033462 |
T |
|
| Q |
818 |
aacgctaaaagttgaaaatatcgtataaatgaatgtaaccacgtgtatgagtgtcgtgtcagagaccgacgacacttttaacaatctagagaactaatga |
917 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
2033461 |
aacgctaaaagttgaaaatatggtataaatgaatgtaaccacgtgtatgagtgtcgtgtcagagaccgacaacactcttaaccatctagagaactaatga |
2033362 |
T |
|
| Q |
918 |
agagaacaaaataacaaacgcgattaaagtttcattagaatgagcaaaatcttcaaaatacaaatgttactctcaaaatataaagtgaaatataaataga |
1017 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2033361 |
agagaacaaaataacaaacgcgattaaagtttcattagaatgagcaaaatcttcaaaatacaaatgttactctcaaaatatatagtgaaatataaataga |
2033262 |
T |
|
| Q |
1018 |
cgtaactacccttatctcaattataacaaaagaaccattacatattatttaaacagacacaaacacatgtcagacactcaacgcgcatccaatctgaaat |
1117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2033261 |
cgtaactacccttatctcaattataacaaaagaaccattacatattatttaaacagacacaaacacatgttagacactcaacgcgcatccaatctgaaat |
2033162 |
T |
|
| Q |
1118 |
ttcagtgctacaaatgataataacaaaatatcaaggagcaaataaattttatagatgtacataaacatacctgcatac |
1195 |
Q |
| |
|
||| ||||||||||||||||| || |||| ||||||||||||||||||||| | || | ||||||||||||||||||| |
|
|
| T |
2033161 |
ttcggtgctacaaatgataatgaccaaatttcaaggagcaaataaattttacacatatgcataaacatacctgcatac |
2033084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 375
Target Start/End: Complemental strand, 2055396 - 2055039
Alignment:
| Q |
18 |
aatataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtca |
117 |
Q |
| |
|
|||||| ||||||| || ||||||||||||||||| ||||||||| |||||||| || |||||||||| ||||||| |||||||||||||||| |||||| |
|
|
| T |
2055396 |
aatatacacataagtatgcataaaacttgcctgcaaaagatcaccaacattaactattagagctccagatacaggtgttatatcaatccatttatcgtca |
2055297 |
T |
|
| Q |
118 |
tacagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggac |
217 |
Q |
| |
|
|| |||||||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2055296 |
taaagaacttggaggccaccaatatggtcttgaagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggac |
2055197 |
T |
|
| Q |
218 |
aaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2055196 |
aaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaa |
2055097 |
T |
|
| Q |
318 |
taataaagtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaa |
375 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
2055096 |
taataaagtccctagattcatcatgtgtttcccatatcgtagcagtatatctctgcaa |
2055039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 379
Target Start/End: Complemental strand, 2029699 - 2029335
Alignment:
| Q |
15 |
atcaatataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
2029699 |
atcaatataaacataagaatacataaaacttgcctgcaaaagatcaccaacattaactacgagagctccaggtacaggtgttatatcaatccatttatct |
2029600 |
T |
|
| Q |
115 |
tcatacagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcag |
214 |
Q |
| |
|
||||| |||||||| || ||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2029599 |
tcataaagaacttggaggccaccaatatggtcttggagaagcactgtgaggaaatcattgtcacaatgctttgttgttcccacagtcaattctggttcag |
2029500 |
T |
|
| Q |
215 |
gacaaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattc |
314 |
Q |
| |
|
|||||||||| || ||||||||||||||||| |||||||| |||||| |||||||||| | ||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
2029499 |
gacaaggaggataataatggcaaagagcaattagcccttcggcacaacccatatcttttagatggtttggattcaaacctaaagcttgtgacaacaattc |
2029400 |
T |
|
| Q |
315 |
aaataataaagtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaagaat |
379 |
Q |
| |
|
||| | ||||| ||||||||||||| | ||||||||||| || ||||||||||||||||||| |
|
|
| T |
2029399 |
aaacagcaaagttcctagattcatcacctgtttcccatattctagtagtatatctctgcaagaat |
2029335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 19 - 381
Target Start/End: Complemental strand, 2050986 - 2050624
Alignment:
| Q |
19 |
atataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcat |
118 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||| |||||||||||||||| || |||| |
|
|
| T |
2050986 |
atatacacataagaatacataaaacttgcctgcaaaagatcaccaacattaactatgagagctccagatacaggtgttatatcaatccatttatcttcat |
2050887 |
T |
|
| Q |
119 |
acagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggaca |
218 |
Q |
| |
|
| |||||||| || ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2050886 |
aaagaacttggaggccaccaatatggtcttgaagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggaca |
2050787 |
T |
|
| Q |
219 |
aggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaat |
318 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||||||||||||| |||||||||| | |||||||||||||| ||||| |||||||||| |||||||||| |
|
|
| T |
2050786 |
aggaggataataatggcaaagagcaattagcccttcagcacaacccatatcttttagatggtttggattcagtcctaaagcttctgacatcaattcaaat |
2050687 |
T |
|
| Q |
319 |
aataaagtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaagaataa |
381 |
Q |
| |
|
| |||||| ||||||||||||| | ||||||||||| || | || ||||||| |||||||| |
|
|
| T |
2050686 |
agtaaagttcctagattcatcacctgtttcccatattctagtattacatctctgtaagaataa |
2050624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 18 - 355
Target Start/End: Complemental strand, 2058220 - 2057883
Alignment:
| Q |
18 |
aatataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtca |
117 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||| || ||| |
|
|
| T |
2058220 |
aatatacacataagaatgcataaaacttgcctgaagaagatcaccaacattaactaggagagctccaggtacaggtgttatatcaatccatttatcttca |
2058121 |
T |
|
| Q |
118 |
tacagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggac |
217 |
Q |
| |
|
|| |||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |
|
|
| T |
2058120 |
taaagaacttggagaccaccaatatggtcttgtagaagcattgtcaggaaatcattatcagaatgcttggttgttcccacagtcaattctggttcgggat |
2058021 |
T |
|
| Q |
218 |
aaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaa |
317 |
Q |
| |
|
||| ||| || ||||| ||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2058020 |
aagaaggataataatgacaaagagcaattagcccttcagcacaacccatatcttttagatggtttggattcaaacctaaagcttctgacaacaattcaaa |
2057921 |
T |
|
| Q |
318 |
taataaagtccctagattcatcatgtatttcccatatt |
355 |
Q |
| |
|
| |||||| ||||||||||||| | ||||||||||| |
|
|
| T |
2057920 |
cagtaaagttcctagattcatcacttgtttcccatatt |
2057883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 382
Target Start/End: Original strand, 1948459 - 1948823
Alignment:
| Q |
18 |
aatataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtca |
117 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||| | |||||| ||||||||||||| | ||||| |||||||||||||||| || ||| |
|
|
| T |
1948459 |
aatattaacataagaatacataaaacttgcctgcaaaagatcaccaatattaactatgagagctccagttgcaggtgttatatcaatccatttatcttca |
1948558 |
T |
|
| Q |
118 |
tacagaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggac |
217 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||||||||||||||||| ||| || || |||||||| |||||||| | ||||| |||||||||||||| |
|
|
| T |
1948559 |
taaagaacttggagaccaccaatatggtcttgtagaagcactgtgagaaaactatggtctgaatgcttagttgttcccatagtcagttctggttcaggac |
1948658 |
T |
|
| Q |
218 |
aaggagggtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaa |
317 |
Q |
| |
|
||| ||| || |||||||||| ||||||||||||||||| |||| |||||||||| | ||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
1948659 |
aagaaggataataatggcaaacagcaatcagcccttcagtacaacccatatcttttagatggtttggtttcaaacctaatgcttctgacaaaaattcaaa |
1948758 |
T |
|
| Q |
318 |
taataaagtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaagaataag |
382 |
Q |
| |
|
|| | ||||||||||||||||| || ||||||||||| || |||||||||| ||||||||| |
|
|
| T |
1948759 |
caacatagtccctagattcatcacgtgtttcccatattctagggttatatctctgtaagaataag |
1948823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 39 - 375
Target Start/End: Complemental strand, 2037798 - 2037462
Alignment:
| Q |
39 |
aaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaacttgaagaccacca |
138 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| ||||||||||||| ||||||| |||||||||||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
2037798 |
aaaacttgcctgcagaagatcaccaatattaactatgagagctccagatacaggtgttatatcaatccatttatcttcataaagaacttggagaccacca |
2037699 |
T |
|
| Q |
139 |
acatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagggtagtaatggcaaa |
238 |
Q |
| |
|
| ||||||||| | |||||||||||| ||| ||| || |||||||| | |||||| ||||||||||||||||| ||||||| ||| || |||||||||| |
|
|
| T |
2037698 |
atatggtcttggataagcactgtgagaaaaccatggtctgaatgcttggctgttcccacagtcaattctggttccggacaagaaggataataatggcaaa |
2037599 |
T |
|
| Q |
239 |
gagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaataataaagtccctagattcat |
338 |
Q |
| |
|
|||||| || |||| |||||||||||||||||| | |||||||||||||| |||||| |||||||| ||||||| ||| | ||| ||||||||||| | |
|
|
| T |
2037598 |
gagcaaatagtcctttagcacaatccatatcttttagatggtttggattcagacctaaagcttctgataacaattaaaacagtaaggtccctagatttgt |
2037499 |
T |
|
| Q |
339 |
catgtatttcccatattgtaacagtatatctctgcaa |
375 |
Q |
| |
|
||||| ||| ||||||| || ||||||||||||||| |
|
|
| T |
2037498 |
catgtgttttccatattctagaagtatatctctgcaa |
2037462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 159; E-Value: 5e-84
Query Start/End: Original strand, 25 - 375
Target Start/End: Complemental strand, 10768713 - 10768363
Alignment:
| Q |
25 |
acataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaa |
124 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||| || |||||||| |||||||| ||||| |||||| | |||||||||||||| || | ||| |||| |
|
|
| T |
10768713 |
acataagaatgcagaaaacttgcctgcaaaagatctccaacattaactatgagagccccaggaacaggtgtaatatcaatccatttatcctgataaagaa |
10768614 |
T |
|
| Q |
125 |
cttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagg |
224 |
Q |
| |
|
|||| || ||||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10768613 |
cttggaggccaccaatatggtcttggagaagcacagtgaggaaatcattatcagaatgcttggttgttcccacagtcaattctggttcaggacaaggagg |
10768514 |
T |
|
| Q |
225 |
gtagtaatggcaaagagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaataataaa |
324 |
Q |
| |
|
|| ||||| | ||||||| | |||||||||||||| |||||||| | |||||||||||||| |||||| |||||||| | | |||||| |||||| |
|
|
| T |
10768513 |
ataataatgaccgagagcaagtaatccttcagcacaatcaatatcttttagatggtttggattcagacctaaagcttctgagcatagttcaaacaataaa |
10768414 |
T |
|
| Q |
325 |
gtccctagattcatcatgtatttcccatattgtaacagtatatctctgcaa |
375 |
Q |
| |
|
|||||||| || |||||| ||| ||||||| || || ||||||||||||| |
|
|
| T |
10768413 |
gtccctaggtttctcatgtgttttccatattctagcaatatatctctgcaa |
10768363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 39 - 381
Target Start/End: Complemental strand, 2047037 - 2046709
Alignment:
| Q |
39 |
aaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaacttgaagaccacca |
138 |
Q |
| |
|
||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||| || ||||| |||||||| |||||||| |
|
|
| T |
2047037 |
aaaacttacctgcagaagatcaccaacattaactatgagagatccaggtacaggtgctatatcaatccatttatcttcataaagaacttggagaccacct |
2046938 |
T |
|
| Q |
139 |
acatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagggtagtaatggcaaa |
238 |
Q |
| |
|
| ||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
2046937 |
atatggtcttgtagaagcactgt--------------cagaatacttggttgttcccacagtcaattctggttcaggacaaggaggataataatggcaaa |
2046852 |
T |
|
| Q |
239 |
gagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaataataaagtccctagattcat |
338 |
Q |
| |
|
|||||| | ||||| || ||||||||||||||| | ||| ||||||| ||||||||| |||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
2046851 |
gagcaaataacccttgagtacaatccatatcttttagatgatttggatgcaaacctaaatcttcagataacaattcaaacaataaagtccctagattcat |
2046752 |
T |
|
| Q |
339 |
catgtatttcccatattgtaacagtatatctctgcaagaataa |
381 |
Q |
| |
|
||||| ||| ||||||| || | ||||||||||||||||||| |
|
|
| T |
2046751 |
catgtgttttccatattctagtattatatctctgcaagaataa |
2046709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 1021 - 1195
Target Start/End: Complemental strand, 2054504 - 2054331
Alignment:
| Q |
1021 |
aactacccttatctcaattataacaaaagaaccattacatattatttaaacagacacaaacacatgtcagacactcaacgcgcatccaatctgaaatttc |
1120 |
Q |
| |
|
||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||| |
|
|
| T |
2054504 |
aactacccttagccgaattataacaaaaggcccattacatattatttaa-cagacacaaacatgtgtaatacactcaacgcgcatccaatctgaaatttc |
2054406 |
T |
|
| Q |
1121 |
agtgctacaaatgataataacaaaatatcaaggagcaaataaattttatagatgtacataaacatacctgcatac |
1195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2054405 |
agtgctacaaatgataataacaaaatatcaaggagcaaataaattttacagatgtacataaacatacctgcatac |
2054331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 626 - 701
Target Start/End: Complemental strand, 2054886 - 2054811
Alignment:
| Q |
626 |
atataagacaaaattagagatattagaaaaaggctaagcttgagtacgacttaaatacgcagcgaagtattgtaag |
701 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
2054886 |
atatatgacaagattagagatattagaaaaaggctaagcttgagtatgacttaaataggcagcggagtattgtaag |
2054811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1132 - 1195
Target Start/End: Original strand, 1950385 - 1950448
Alignment:
| Q |
1132 |
tgataataacaaaatatcaaggagcaaataaattttatagatgtacataaacatacctgcatac |
1195 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||| | || |||||| |||||||||||||| |
|
|
| T |
1950385 |
tgataataaccaaatttcaaggagcaaataaattttacacatatacatatacatacctgcatac |
1950448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 2023017 - 2022900
Alignment:
| Q |
121 |
agaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaag |
220 |
Q |
| |
|
|||||||| || || |||| ||| |||||||||||||| |||| || || ||||| | |||||| ||| |||| | ||||||||||||||| ||||| | |
|
|
| T |
2023017 |
agaacttggaggccgccaatatgatcttgtagaagcacggtgataaagtcgttatccgtatgcttggttattcccaaagtcaattctggttctggacagg |
2022918 |
T |
|
| Q |
221 |
gagggtagtaatggcaaa |
238 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
2022917 |
aaggatagtaatggcaaa |
2022900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 10768233 - 10768176
Alignment:
| Q |
546 |
atcaaagctatttcaccgattaatacacctcaaaataaggatatgaaagcaatttcac |
603 |
Q |
| |
|
|||||||| | |||| | ||||||||| || |||||||||||||||||| |||||||| |
|
|
| T |
10768233 |
atcaaagccacttcatcaattaatacatctaaaaataaggatatgaaagtaatttcac |
10768176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 107; Significance: 5e-53; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 5e-53
Query Start/End: Original strand, 39 - 381
Target Start/End: Original strand, 48906776 - 48907118
Alignment:
| Q |
39 |
aaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaacttgaagaccacca |
138 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||| | ||||| ||| ||| |||||| | ||||| |||||| || | ||| |||||||| || |||||| |
|
|
| T |
48906776 |
aaaacttgcctgcaaaaggtcaccaacattaactacgagagacccatgtataggtttcacatcaacccatttatcttgataaagaacttggaggccacca |
48906875 |
T |
|
| Q |
139 |
acatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagggtagtaatggcaaa |
238 |
Q |
| |
|
| ||||||||| |||| ||| | |||||| || | |||||||||||| || ||| |||||||| ||||||||||| || ||||| || ||||||||| |
|
|
| T |
48906876 |
atatggtcttggagaaccaccgcaaggaaaccagtgtcagaatgcttttttagtcccacagtcaaatctggttcagggcatggaggataataatggcaag |
48906975 |
T |
|
| Q |
239 |
gagcaatcagcccttcagcacaatccatatctttcaaatggtttggattcaaacctaatgcttctgacaacaattcaaataataaagtccctagattcat |
338 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||||| | |||||||||||||| |||||| |||||||||| ||||||||||| |||| || || ||||| |
|
|
| T |
48906976 |
cagcaattagcccttcaacacaacccatatcttttagatggtttggattcagacctaaagcttctgacagcaattcaaatagtaaaaatcccaggttcat |
48907075 |
T |
|
| Q |
339 |
catgtatttcccatattgtaacagtatatctctgcaagaataa |
381 |
Q |
| |
|
||| | ||| | ||||| || |||||| ||||||||||||||| |
|
|
| T |
48907076 |
catttgtttactatattctatcagtatgtctctgcaagaataa |
48907118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 55; Significance: 5e-22; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 17183284 - 17183374
Alignment:
| Q |
20 |
tataaacataagaatacataaaacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccattt |
110 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| |||||| || |||||||| ||||||||||||| ||||||| |||||| ||||||||| |
|
|
| T |
17183284 |
tataaacgtaagagtacataaaacttgcctgcaaaagatcgccaacattaactatgagagctccagttacaggtgttatattaatccattt |
17183374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 16425975 - 16426072
Alignment:
| Q |
121 |
agaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggaca |
218 |
Q |
| |
|
|||||||| || ||||| | ||| ||||||||||||||||||| ||||||| |||| | || ||| |||||| | ||| ||||||||||||||||| |
|
|
| T |
16425975 |
agaacttggaggccacctatatgatcttgtagaagcactgtgatgaaatcaatatcggcgtgttttactgttcctatagttaattctggttcaggaca |
16426072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 8e-21; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 28735273 - 28735465
Alignment:
| Q |
41 |
aacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaacttgaagaccaccaac |
140 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||||| | ||||| ||| || ||| ||||| || || | || ||||||||||||||||||| |
|
|
| T |
28735273 |
aacttgcctgcagaagatcaccaatattaacaacaagagcctcgggtaccggtggtacatcgatccacttttcttggtaaagaacttgaagaccaccaat |
28735372 |
T |
|
| Q |
141 |
atggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagggtagtaatg |
233 |
Q |
| |
|
||||||||| |||||||||||||| ||| | ||||||||| || || ||||| | || || |||||||||||||||| ||| |||||||| |
|
|
| T |
28735373 |
atggtcttggagaagcactgtgagaaaactaccatcagaatgtttggtggttcccattgttaaatctggttcaggacaagcaggatagtaatg |
28735465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 28742435 - 28742553
Alignment:
| Q |
121 |
agaacttgaagaccaccaacatggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaag |
220 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||||||||||||||||| | |||||||||| || | ||||| | || || | |||||||||||||| |
|
|
| T |
28742435 |
agaacttgaaggccaccaatatggtcttgaagaagcactgtgaggaaactactatcagaatgtttggcggttcccatcgttaaatgtggttcaggacaag |
28742534 |
T |
|
| Q |
221 |
gagggtagtaatggcaaag |
239 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
28742535 |
caggatagtaatggcaaag |
28742553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 28700269 - 28700464
Alignment:
| Q |
41 |
aacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaacttgaagaccaccaac |
140 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||| || ||||| ||| || ||| ||||| ||||| | | ||||||||||| ||||||| |
|
|
| T |
28700269 |
aacttgcctgcagaagatcaccgatattaacaacaagagccccgggtaccggtggtacatcgatccacttgtcttggtgaagaacttgaaggccaccaat |
28700368 |
T |
|
| Q |
141 |
at---ggtcttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagggtagtaatg |
233 |
Q |
| |
|
| ||||||| |||||||||||||| ||| | ||||||||| || || ||||| | || || |||||||||||||||| ||| |||||||| |
|
|
| T |
28700369 |
aatacggtcttggagaagcactgtgagaaaactaacatcagaatgtttggtggttcccattgttaaatctggttcaggacaagcaggatagtaatg |
28700464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 286
Target Start/End: Original strand, 28783339 - 28783587
Alignment:
| Q |
41 |
aacttgcctgcagaagatcaccgacattaacaatgagagctccaggtacaggttttatatcaatccatttgtcgtcatacagaacttgaagaccaccaac |
140 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||| ||||| |||||| || |||||||||||| |||| | | | |||||| || ||||||| |
|
|
| T |
28783339 |
aacttgcctgtagaagatcaccaacattaacaacaagagcatcaggtattggaggtatatcaatccacttgttctggtgaaaaacttggaggccaccaat |
28783438 |
T |
|
| Q |
141 |
atggtc---ttgtagaagcactgtgaggaaatcattatcagaatgctttgttgttccgacagtcaattctggttcaggacaaggagggtagtaatggcaa |
237 |
Q |
| |
|
||| || ||| ||||||| |||||| ||| | |||||||||| ||||| ||||| | ||| ||||||||||||||||||| ||| |||||||| | | |
|
|
| T |
28783439 |
atgatcatcttgaagaagcaatgtgagaaaacaactatcagaatgttttgtggttcccatagttaattctggttcaggacaagcaggatagtaatgacta |
28783538 |
T |
|
| Q |
238 |
agagcaatcagcccttcagcacaatccatatctttcaaatggtttggat |
286 |
Q |
| |
|
|| | | | ||| | ||||||| |||| ||||| ||||||||||||| |
|
|
| T |
28783539 |
agtgatagaatccccttagcacaacccatgtcttttaaatggtttggat |
28783587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0515 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0515
Description:
Target: scaffold0515; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 10090 - 10167
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||||| |||||| |||||| |
|
|
| T |
10090 |
acgacttaaatacgcgacgaggtattgtaagtggcagagtggccttgctgccacgatccactgagatttagcccttgt |
10167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 27710 - 27787
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||||| |||||| |||||| |
|
|
| T |
27710 |
acgacttaaatacgcgacgaggtattgtaagtggcagagtggccttgctgccacgatccactgagatttagcccttgt |
27787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 36486 - 36563
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||||| |||||| |||||| |
|
|
| T |
36486 |
acgacttaaatacgcgacgaggtattgtaagtggcagagtggccttgctgccacgatccactgagatttagcccttgt |
36563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055 (Bit Score: 34; Significance: 0.000000002; HSPs: 8)
Name: scaffold0055
Description:
Target: scaffold0055; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 17937 - 18014
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
17937 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
18014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 20749 - 20672
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
20749 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
20672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 23988 - 23911
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
23988 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
23911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 37221 - 37144
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
37221 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
37144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 45070 - 44993
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
45070 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
44993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 57795 - 57718
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
57795 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
57718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 29249 - 29326
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || || |||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
29249 |
acgacttaaatacgcgacggggtgttgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
29326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 76485 - 76409
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
76485 |
acgacttaaatacgcgacggggtattgtaagt-gcagagtggccttgctgccacgatccactgagattcagcccttgt |
76409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052 (Bit Score: 34; Significance: 0.000000002; HSPs: 8)
Name: scaffold0052
Description:
Target: scaffold0052; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 8977 - 8900
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
8977 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
8900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 12179 - 12102
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
12179 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
12102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 16542 - 16619
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
16542 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
16619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 20992 - 20915
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
20992 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
20915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Original strand, 39836 - 39913
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
39836 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
39913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 55399 - 55322
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
55399 |
acgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
55322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 43388 - 43312
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || ||||||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
43388 |
acgacttaaatacgcgacggggtattgtaagt-gcagagtggccttgctgccacgatccactgagattcagcccttgt |
43312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 671 - 748
Target Start/End: Complemental strand, 66816 - 66739
Alignment:
| Q |
671 |
acgacttaaatacgcagcgaagtattgtaagttgtagagtggccttactgccacgattcactgaaatttagtccttgt |
748 |
Q |
| |
|
||||||||||||||| || || |||||||| | ||||||||||| |||||||||| |||||| ||| || |||||| |
|
|
| T |
66816 |
acgacttaaatacgcgacggggtgttgtaagtggcagagtggccttgctgccacgatccactgagattcagcccttgt |
66739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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