View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10923_high_33 (Length: 346)
Name: NF10923_high_33
Description: NF10923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10923_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 40731319 - 40730997
Alignment:
| Q |
1 |
aagtaatagtatgcaccatctaaaacatgctagtatgtcaccataaagagacaaaaagctaccattccataagtttaaaaa---taccttaaattggcaa |
97 |
Q |
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| T |
40731319 |
aagtaatagtatgcaccatctaaaacatgctagtatgtcaccataaagagacaaaaagctaccattccataagtttaaaaacaataccttaaattggcaa |
40731220 |
T |
|
| Q |
98 |
tagcatccttatttcaattttcaagtacaaacaggacacaatgtttcaataaatttattgaaaattgattcatactgtatttaaaagagagaatacacgc |
197 |
Q |
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| T |
40731219 |
tagcatccttatttcaattttcaagtacaa-caggacacaatgtttcaataaatttattgaaaattgattcatactgtatttaaaagagagaatacgcgc |
40731121 |
T |
|
| Q |
198 |
gaaagaagacatgggggatgcatagatgatatgaaacgataacatgtcagaagaattataatccctctcattaagcttttttatctgtctgtactttgta |
297 |
Q |
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|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40731120 |
gaaagaaggcatgggggatgcatagattatatgaaacgataacatgtcagaagaattataatccctctcattaagcttttttatctgtctgtactttgta |
40731021 |
T |
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| Q |
298 |
gccaacctagtaaagacctcatgc |
321 |
Q |
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|||||||||||||||||||||||| |
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| T |
40731020 |
gccaacctagtaaagacctcatgc |
40730997 |
T |
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