View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10923_high_38 (Length: 330)
Name: NF10923_high_38
Description: NF10923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10923_high_38 |
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Alignment Details
Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 7 - 321
Target Start/End: Complemental strand, 20630639 - 20630325
Alignment:
| Q |
7 |
ggatcaaaatgttaggtttggacataaaacttgtgcgactcaaaatgaaccacgtgtcctcaactaaccaatgacccacatatataaccactcataattt |
106 |
Q |
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| T |
20630639 |
ggatcaaaatgttaggtttggacataaaacttgtgcgactcaaaatgaaccacgtgtcctcaactaaccaatgacccacatatataaccactcataattt |
20630540 |
T |
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| Q |
107 |
cattccttttacatttcttataaaactttattatgtacaaacattgtgattttacaaacacaacaacatcatatatagttaatcacttatagaaatcttg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20630539 |
cattccttttacatttcttataaaactttattatgtacaaacattgtgattttacaaacacaacaacatcatatatagttaatcacttatagaaatcttg |
20630440 |
T |
|
| Q |
207 |
aaggtgacaccaacatccaaagaatcataactatattgatcaagctaagagccaaaaatctttatgacgcttagtagtaatcatataccctccaattttc |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20630439 |
aaggtgacaccaacatccaaagaatcataactatattgatcaagctaagagccaaaaatctttatgacgcttagtagtaatcatataccctccaattttc |
20630340 |
T |
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| Q |
307 |
ttactctttcttctc |
321 |
Q |
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||||||||||||||| |
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| T |
20630339 |
ttactctttcttctc |
20630325 |
T |
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