View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10923_high_57 (Length: 245)
Name: NF10923_high_57
Description: NF10923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10923_high_57 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 7048193 - 7047983
Alignment:
| Q |
27 |
gtcttcataatttgtgttaacaaattatcatagatagaagaaaattctaaggtagctaggaatcaagcatgagtagtttgaggaatgagaatgaagaagg |
126 |
Q |
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| T |
7048193 |
gtcttcataatttgtgttaacaaattatcatagatagaagaaaattccaaggtagctaggaatcaagcatgagtagtttgaggaatgagaatgaagaagg |
7048094 |
T |
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| Q |
127 |
aagggatcttaagaagccatttctacacacaggaagttggttcaaaatcaatgaaagaaaacaatcaagtttgtttgggtcaactcaagccattcgtgac |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7048093 |
aagggatcttaagaagccatttctacacacaggaagttggttcaaaatcaatgaaagaaaacaatcaagtttgtttgggtcaactcaagccattcgtgac |
7047994 |
T |
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| Q |
227 |
tctttcatctc |
237 |
Q |
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|||| |||||| |
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| T |
7047993 |
tcttccatctc |
7047983 |
T |
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