View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10923_high_64 (Length: 235)

Name: NF10923_high_64
Description: NF10923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10923_high_64
NF10923_high_64
[»] chr7 (40 HSPs)
chr7 (38-221)||(29763737-29763920)
chr7 (1-38)||(29763675-29763712)
chr7 (129-231)||(33050181-33050283)
chr7 (131-231)||(30864388-30864488)
chr7 (117-171)||(26018026-26018080)
chr7 (131-231)||(35005072-35005168)
chr7 (134-176)||(35857500-35857542)
chr7 (126-176)||(37355127-37355177)
chr7 (127-169)||(40900891-40900933)
chr7 (130-176)||(44175544-44175590)
chr7 (128-169)||(1284411-1284452)
chr7 (129-169)||(6655649-6655689)
chr7 (130-231)||(29162250-29162351)
chr7 (131-171)||(47012601-47012641)
chr7 (131-170)||(5068655-5068694)
chr7 (128-175)||(11604709-11604756)
chr7 (129-176)||(26904728-26904775)
chr7 (130-169)||(49167888-49167927)
chr7 (135-169)||(6699868-6699902)
chr7 (129-231)||(2347030-2347132)
chr7 (131-164)||(3849487-3849520)
chr7 (131-176)||(11070228-11070273)
chr7 (134-175)||(24249775-24249816)
chr7 (131-221)||(27164818-27164908)
chr7 (131-176)||(28081808-28081853)
chr7 (128-157)||(37848654-37848683)
chr7 (131-176)||(43079658-43079703)
chr7 (126-170)||(2849553-2849597)
chr7 (133-169)||(3143986-3144022)
chr7 (129-169)||(3247067-3247107)
chr7 (131-159)||(9363387-9363415)
chr7 (132-176)||(10014981-10015025)
chr7 (133-169)||(21153052-21153088)
chr7 (129-169)||(23329900-23329940)
chr7 (131-159)||(27070711-27070739)
chr7 (131-159)||(27207574-27207602)
chr7 (129-169)||(31487188-31487228)
chr7 (132-168)||(38218374-38218410)
chr7 (135-175)||(43255594-43255634)
chr7 (132-176)||(48383344-48383388)
[»] chr1 (54 HSPs)
chr1 (131-231)||(36669341-36669441)
chr1 (126-171)||(45863752-45863797)
chr1 (128-169)||(49699785-49699826)
chr1 (130-231)||(25995459-25995560)
chr1 (129-176)||(29362718-29362765)
chr1 (129-176)||(30547353-30547400)
chr1 (126-169)||(45350128-45350171)
chr1 (129-175)||(40118742-40118788)
chr1 (131-169)||(43755711-43755749)
chr1 (131-169)||(48678986-48679024)
chr1 (131-175)||(2854987-2855031)
chr1 (129-169)||(6841787-6841827)
chr1 (126-231)||(26585144-26585249)
chr1 (132-176)||(26839383-26839427)
chr1 (131-171)||(29706734-29706774)
chr1 (131-175)||(32873341-32873385)
chr1 (131-167)||(35026891-35026927)
chr1 (131-175)||(49645362-49645406)
chr1 (132-171)||(1922456-1922495)
chr1 (131-231)||(2827681-2827781)
chr1 (126-169)||(13078983-13079026)
chr1 (131-170)||(26101394-26101433)
chr1 (131-231)||(29489330-29489430)
chr1 (131-231)||(42256460-42256560)
chr1 (130-169)||(42615859-42615898)
chr1 (131-169)||(586899-586937)
chr1 (134-176)||(835874-835916)
chr1 (130-176)||(3919299-3919345)
chr1 (131-169)||(23554751-23554789)
chr1 (134-221)||(25130706-25130793)
chr1 (135-169)||(25586559-25586593)
chr1 (134-176)||(25994942-25994984)
chr1 (130-164)||(31847223-31847257)
chr1 (133-171)||(32926261-32926299)
chr1 (130-176)||(34157805-34157851)
chr1 (130-168)||(37690428-37690466)
chr1 (130-171)||(5771779-5771820)
chr1 (126-171)||(11947790-11947835)
chr1 (129-231)||(13813556-13813658)
chr1 (131-176)||(27352630-27352675)
chr1 (128-157)||(37669395-37669424)
chr1 (128-161)||(40139123-40139156)
chr1 (132-169)||(41029029-41029066)
chr1 (131-175)||(7371975-7372019)
chr1 (131-171)||(12306165-12306205)
chr1 (126-170)||(15419248-15419292)
chr1 (129-157)||(16836149-16836177)
chr1 (131-171)||(26159441-26159481)
chr1 (129-169)||(27357505-27357545)
chr1 (129-157)||(28457392-28457420)
chr1 (131-171)||(30535991-30536031)
chr1 (131-171)||(33125354-33125394)
chr1 (131-175)||(41885721-41885765)
chr1 (132-176)||(52714979-52715023)
[»] chr4 (60 HSPs)
chr4 (131-175)||(54801514-54801558)
chr4 (131-231)||(24235320-24235420)
chr4 (134-175)||(19879776-19879817)
chr4 (131-221)||(35661578-35661668)
chr4 (129-169)||(30866351-30866391)
chr4 (129-176)||(3475867-3475914)
chr4 (131-231)||(40721935-40722035)
chr4 (127-169)||(35332702-35332744)
chr4 (127-169)||(40335785-40335827)
chr4 (129-170)||(40258203-40258244)
chr4 (128-176)||(32901326-32901374)
chr4 (131-171)||(39158105-39158145)
chr4 (128-171)||(149516-149559)
chr4 (132-175)||(2615155-2615198)
chr4 (131-231)||(5208298-5208398)
chr4 (129-176)||(9032778-9032825)
chr4 (130-169)||(29384230-29384269)
chr4 (134-169)||(40308444-40308479)
chr4 (131-231)||(55267972-55268072)
chr4 (127-157)||(3078953-3078983)
chr4 (122-176)||(3222980-3223034)
chr4 (131-169)||(12074184-12074222)
chr4 (131-169)||(23094376-23094414)
chr4 (131-169)||(28203392-28203430)
chr4 (131-165)||(31559538-31559572)
chr4 (131-169)||(31804362-31804400)
chr4 (131-169)||(36444428-36444466)
chr4 (129-171)||(46282404-46282446)
chr4 (129-175)||(46480531-46480577)
chr4 (130-172)||(51160667-51160709)
chr4 (131-218)||(53662412-53662499)
chr4 (131-176)||(1987739-1987784)
chr4 (134-171)||(14113646-14113683)
chr4 (131-176)||(15638161-15638206)
chr4 (131-176)||(24088590-24088635)
chr4 (128-157)||(28899249-28899278)
chr4 (131-172)||(32392249-32392290)
chr4 (135-176)||(33484134-33484175)
chr4 (130-159)||(36123503-36123532)
chr4 (131-176)||(41609705-41609750)
chr4 (131-176)||(44368228-44368273)
chr4 (131-176)||(45521605-45521650)
chr4 (132-169)||(45548817-45548854)
chr4 (131-176)||(47105911-47105956)
chr4 (131-176)||(51107467-51107512)
chr4 (131-176)||(52669635-52669680)
chr4 (122-175)||(53384354-53384407)
chr4 (131-171)||(2738299-2738339)
chr4 (129-169)||(2788601-2788641)
chr4 (129-157)||(4550332-4550360)
chr4 (132-176)||(6686047-6686091)
chr4 (131-171)||(21392570-21392610)
chr4 (132-168)||(32464638-32464674)
chr4 (129-157)||(39881075-39881103)
chr4 (130-170)||(42178082-42178122)
chr4 (135-167)||(44134347-44134379)
chr4 (132-168)||(46523676-46523711)
chr4 (131-171)||(53463101-53463141)
chr4 (135-171)||(54921693-54921729)
chr4 (129-169)||(55960187-55960227)
[»] chr2 (44 HSPs)
chr2 (129-176)||(5095979-5096026)
chr2 (128-218)||(6328664-6328754)
chr2 (132-221)||(38246732-38246821)
chr2 (128-171)||(12784430-12784473)
chr2 (131-231)||(34144522-34144622)
chr2 (131-231)||(44484627-44484727)
chr2 (129-171)||(3771369-3771411)
chr2 (131-169)||(41353530-41353568)
chr2 (131-176)||(11152725-11152770)
chr2 (130-171)||(21313515-21313556)
chr2 (126-171)||(21738647-21738692)
chr2 (127-176)||(33559635-33559684)
chr2 (130-170)||(30416359-30416399)
chr2 (131-231)||(3196058-3196158)
chr2 (130-169)||(3924158-3924197)
chr2 (133-176)||(5962640-5962683)
chr2 (129-176)||(13850210-13850257)
chr2 (129-176)||(18749389-18749436)
chr2 (129-172)||(23048113-23048156)
chr2 (131-231)||(36383462-36383562)
chr2 (134-169)||(41212949-41212984)
chr2 (134-169)||(45693501-45693536)
chr2 (131-169)||(2013318-2013356)
chr2 (131-161)||(18373847-18373877)
chr2 (131-169)||(34442113-34442151)
chr2 (130-172)||(35334519-35334561)
chr2 (131-161)||(37601226-37601256)
chr2 (130-168)||(38257327-38257365)
chr2 (131-176)||(7595264-7595309)
chr2 (131-176)||(12256901-12256946)
chr2 (131-172)||(18508078-18508119)
chr2 (131-176)||(27307257-27307302)
chr2 (134-171)||(32869829-32869866)
chr2 (131-176)||(35171252-35171297)
chr2 (128-169)||(36816449-36816490)
chr2 (131-176)||(40371119-40371164)
chr2 (134-171)||(43691018-43691055)
chr2 (131-171)||(4319769-4319809)
chr2 (134-170)||(5361798-5361834)
chr2 (131-171)||(9634467-9634507)
chr2 (131-175)||(13553147-13553191)
chr2 (131-175)||(23391072-23391116)
chr2 (132-176)||(34373006-34373050)
chr2 (131-175)||(38571939-38571983)
[»] chr5 (43 HSPs)
chr5 (129-175)||(30420624-30420670)
chr5 (129-170)||(8681841-8681882)
chr5 (131-176)||(27005505-27005550)
chr5 (131-231)||(38010872-38010972)
chr5 (131-172)||(25345340-25345381)
chr5 (131-176)||(28501592-28501637)
chr5 (131-176)||(31626102-31626147)
chr5 (132-169)||(34400619-34400656)
chr5 (129-169)||(6538868-6538908)
chr5 (131-171)||(6940181-6940221)
chr5 (131-171)||(32912038-32912078)
chr5 (131-175)||(34693243-34693287)
chr5 (131-231)||(4954466-4954566)
chr5 (130-169)||(19983840-19983879)
chr5 (132-175)||(30103478-30103521)
chr5 (131-169)||(7144577-7144615)
chr5 (130-168)||(18395110-18395148)
chr5 (131-169)||(27340869-27340907)
chr5 (129-171)||(40829412-40829454)
chr5 (135-176)||(3154669-3154710)
chr5 (127-176)||(4820151-4820200)
chr5 (131-168)||(7927355-7927392)
chr5 (131-176)||(11415908-11415953)
chr5 (129-231)||(17063863-17063965)
chr5 (131-176)||(20985555-20985600)
chr5 (130-175)||(27440478-27440523)
chr5 (129-231)||(30574348-30574450)
chr5 (130-171)||(34124620-34124661)
chr5 (131-176)||(35814453-35814498)
chr5 (131-171)||(372415-372455)
chr5 (128-176)||(9933497-9933545)
chr5 (126-170)||(18511828-18511872)
chr5 (131-171)||(19840017-19840057)
chr5 (131-171)||(19982017-19982057)
chr5 (131-171)||(21012568-21012608)
chr5 (131-175)||(27271078-27271122)
chr5 (131-171)||(27546063-27546103)
chr5 (130-170)||(27931337-27931377)
chr5 (142-219)||(28501628-28501705)
chr5 (135-171)||(33901927-33901963)
chr5 (131-171)||(33958291-33958331)
chr5 (131-175)||(35464610-35464654)
chr5 (132-176)||(41984307-41984351)
[»] chr3 (46 HSPs)
chr3 (129-231)||(11327106-11327208)
chr3 (121-176)||(1402640-1402695)
chr3 (128-171)||(9311037-9311080)
chr3 (131-170)||(39901591-39901630)
chr3 (121-172)||(44910687-44910738)
chr3 (129-176)||(52100259-52100306)
chr3 (128-170)||(51230640-51230682)
chr3 (131-169)||(52727481-52727519)
chr3 (134-175)||(29222427-29222468)
chr3 (130-175)||(29525232-29525277)
chr3 (132-169)||(40419675-40419712)
chr3 (131-176)||(53473610-53473655)
chr3 (131-171)||(349444-349484)
chr3 (130-231)||(25559703-25559804)
chr3 (131-175)||(48205045-48205089)
chr3 (130-231)||(50280058-50280159)
chr3 (131-231)||(7185-7285)
chr3 (127-231)||(13159657-13159761)
chr3 (131-170)||(21239110-21239149)
chr3 (134-169)||(22836228-22836263)
chr3 (130-169)||(28300285-28300324)
chr3 (134-169)||(29373924-29373959)
chr3 (130-169)||(32622396-32622435)
chr3 (131-169)||(27198193-27198231)
chr3 (131-169)||(35755984-35756022)
chr3 (130-176)||(47141626-47141672)
chr3 (131-169)||(47849672-47849710)
chr3 (130-175)||(4189736-4189781)
chr3 (131-176)||(16267923-16267968)
chr3 (131-172)||(20549415-20549456)
chr3 (131-176)||(27646498-27646543)
chr3 (126-171)||(34057984-34058029)
chr3 (131-176)||(49761212-49761257)
chr3 (139-168)||(49840111-49840140)
chr3 (131-176)||(53932417-53932462)
chr3 (131-175)||(7351665-7351709)
chr3 (129-161)||(19418198-19418230)
chr3 (131-204)||(20096418-20096491)
chr3 (129-169)||(20893275-20893315)
chr3 (128-168)||(23869001-23869041)
chr3 (131-171)||(24095437-24095477)
chr3 (130-170)||(34663103-34663143)
chr3 (131-171)||(42683827-42683867)
chr3 (128-176)||(43441669-43441717)
chr3 (131-175)||(43499588-43499632)
chr3 (135-171)||(44080670-44080706)
[»] chr8 (42 HSPs)
chr8 (129-176)||(14531619-14531666)
chr8 (128-171)||(28756532-28756575)
chr8 (131-231)||(30927902-30928002)
chr8 (133-176)||(43186298-43186341)
chr8 (131-169)||(20852919-20852957)
chr8 (134-176)||(41675395-41675437)
chr8 (131-176)||(9314411-9314456)
chr8 (128-169)||(41406889-41406930)
chr8 (128-168)||(40517266-40517306)
chr8 (131-170)||(6445175-6445214)
chr8 (131-170)||(9079894-9079933)
chr8 (131-231)||(18549979-18550079)
chr8 (134-169)||(28732765-28732800)
chr8 (131-231)||(41273515-41273615)
chr8 (131-169)||(69624-69662)
chr8 (131-169)||(3950110-3950148)
chr8 (131-161)||(8410385-8410415)
chr8 (126-172)||(12655917-12655963)
chr8 (131-169)||(29913564-29913602)
chr8 (131-169)||(36740314-36740352)
chr8 (127-169)||(41344702-41344744)
chr8 (127-169)||(43873724-43873766)
chr8 (131-168)||(7010685-7010722)
chr8 (130-167)||(22960452-22960489)
chr8 (131-172)||(33115905-33115946)
chr8 (131-176)||(33817156-33817201)
chr8 (131-176)||(37568640-37568685)
chr8 (131-168)||(39259088-39259125)
chr8 (132-176)||(1268801-1268845)
chr8 (131-171)||(4312548-4312588)
chr8 (132-176)||(7118467-7118511)
chr8 (130-231)||(10344323-10344424)
chr8 (134-170)||(20703516-20703552)
chr8 (132-176)||(20995084-20995128)
chr8 (131-175)||(23952494-23952538)
chr8 (129-161)||(26871044-26871076)
chr8 (128-164)||(30112838-30112874)
chr8 (131-175)||(36064030-36064074)
chr8 (135-171)||(36637811-36637847)
chr8 (129-169)||(40723352-40723392)
chr8 (127-171)||(42786691-42786735)
chr8 (131-159)||(44068719-44068747)
[»] chr6 (20 HSPs)
chr6 (126-172)||(16368077-16368123)
chr6 (127-167)||(21857602-21857642)
chr6 (128-175)||(29197721-29197768)
chr6 (131-169)||(7636461-7636499)
chr6 (131-169)||(11635617-11635655)
chr6 (131-169)||(16337103-16337141)
chr6 (130-176)||(25995441-25995487)
chr6 (130-176)||(26094904-26094950)
chr6 (131-169)||(26396508-26396546)
chr6 (132-169)||(736853-736890)
chr6 (131-168)||(2822222-2822259)
chr6 (131-176)||(3339525-3339570)
chr6 (128-169)||(12500060-12500101)
chr6 (128-169)||(12507389-12507430)
chr6 (128-169)||(12508800-12508841)
chr6 (131-176)||(17417261-17417306)
chr6 (131-168)||(28670526-28670563)
chr6 (131-171)||(2242053-2242093)
chr6 (129-169)||(16743299-16743339)
chr6 (128-176)||(32746254-32746302)
[»] scaffold0011 (1 HSPs)
scaffold0011 (130-231)||(18594-18695)
[»] scaffold0178 (1 HSPs)
scaffold0178 (128-171)||(9773-9816)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-231)||(147227-147331)
[»] scaffold0154 (1 HSPs)
scaffold0154 (131-169)||(4315-4353)
[»] scaffold0004 (1 HSPs)
scaffold0004 (131-176)||(249168-249213)
[»] scaffold0514 (1 HSPs)
scaffold0514 (127-175)||(1872-1920)
[»] scaffold0121 (1 HSPs)
scaffold0121 (134-170)||(3955-3991)
[»] scaffold0115 (1 HSPs)
scaffold0115 (129-157)||(35543-35571)


Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 221
Target Start/End: Original strand, 29763737 - 29763920
Alignment:
Q  38 aatgaaatgtaaagaatatatgtcacaagtttcctcactttctattagagcaatattctccattgttaattgatgaaagcaatatttcattatgagaaat 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29763737 aatgaaatgtaaagaatatatgtcacaagtttcctcactttctattagagcaatattctccattgttaattgatgaaagcaatatttcattttgagaaat 29763836  T
Q  138 gatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttcctt 221  Q
    ||||||||||||| |||||| |||||| |||||||||||       |||||| |||||||||||||||||||||||||||||||    
T  29763837 gatatttgtacaaccattttgtgataacttttgtacaactttctttctcatactcatatgatgttttcatcctctctcttcctt 29763920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29763675 - 29763712
Alignment:
Q  1 tatctagaaaatagaagtttatagagggaatcacgtga 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29763675 tatctagaaaatagaagtttatagagggaatcacgtga 29763712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 33050181 - 33050283
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctct 228  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||    
T  33050181 atgagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctct 33050280  T
Q  229 ctc 231  Q
    |||    
T  33050281 ctc 33050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 30864488 - 30864388
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| || ||| ||| || |||||||||||       |||||| |||||||||| | | ||||||||||||||||  |||||||    
T  30864488 gagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcatatgatggtcttatcctctctcttcctttttctctct 30864389  T
Q  231 c 231  Q
    |    
T  30864388 c 30864388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 26018026 - 26018080
Alignment:
Q  117 caatatttcattatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||| |||| || |||||||||||||||||||||||||| |||| ||||||    
T  26018026 caatatttaattaagataaatgatatttgtacaatcattttataataacttttgt 26018080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 35005168 - 35005072
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||| ||| ||| |||||||||| |||       |||||| ||| |||||| ||| ||||||||||||||||  |||||||    
T  35005168 gagaaatgatatttgtacaatcaatttttgagaatttttgtataac----tttctcatactcacatgatggttttatcctctctcttcctttttctctct 35005073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 35857500 - 35857542
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  35857500 aaatgatatttgtacaattaatttatgataatttttgtacaac 35857542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 37355127 - 37355177
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||| |||||| |||||| |||||||||||||||||| |||||    
T  37355127 attatgagaaataatatttatacaattattttatgataatttttgaacaac 37355177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 40900891 - 40900933
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  40900891 ttatgagaaatgatatttgtataatcattttacgataattttt 40900933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 44175544 - 44175590
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||    
T  44175544 tgagaaataatatttgtacaatcattttgtgataacttttgtacaac 44175590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 1284411 - 1284452
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  1284411 tatgagaaataatatttgtacaatcattttttgataattttt 1284452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 6655689 - 6655649
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  6655689 atgagaaatgatatttgtaaaatcattttgtgataattttt 6655649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 29162351 - 29162250
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctc 229  Q
    |||||||||||||||||||||||| ||| ||| || ||||||| |||       |||||| |||||||||| | | |||||||||||| |||  ||||||    
T  29162351 tgagaaatgatatttgtacaatcaatttgtgacaacttttgtataactttctctctcatactcatatgatgatcttatcctctctctttctttttctctc 29162252  T
Q  230 tc 231  Q
    ||    
T  29162251 tc 29162250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 47012641 - 47012601
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  47012641 gagaaatgatatttgtacaatcattttctaataatttttgt 47012601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 5068694 - 5068655
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  5068694 gagaaatgatatttgtacaaccattttatgataacttttg 5068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 11604756 - 11604709
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||| |||||||||||||||||  |||||||||||||||||| ||||    
T  11604756 tatgataaatgatatttgtacaaaaattttatgataatttttgaacaa 11604709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 26904775 - 26904728
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  26904775 atgagaaaatatatttgtacaaccattttatgataatttttggacaac 26904728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 49167927 - 49167888
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  49167927 tgagaaatgatatttgtacaattattttgtgataattttt 49167888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 6699902 - 6699868
Alignment:
Q  135 aatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||| |||||||    
T  6699902 aatgatatttgtacaatcattttatgacaattttt 6699868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 2347132 - 2347030
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctct 228  Q
    |||||||||||||||||||||| |||||| ||| || ||| |||||||       |||||| ||| |||||  ||| ||||||||||||| ||  |||||    
T  2347132 atgagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgatagttttatcctctctcttcttttttctct 2347033  T
Q  229 ctc 231  Q
    |||    
T  2347032 ctc 2347030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 3849520 - 3849487
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataa 164  Q
    ||||||||||||||||||| ||||||||||||||    
T  3849520 gagaaatgatatttgtacagtcattttatgataa 3849487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 11070228 - 11070273
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||||  |||| |||||||||||    
T  11070228 gagaaatgatatttgtacaaccattttagtataacttttgtacaac 11070273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 24249816 - 24249775
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||| |||||||||||||| |||||||||| ||||    
T  24249816 aaatgatatttatacaatcattttataataatttttgaacaa 24249775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 27164908 - 27164818
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttcctt 221  Q
    ||||||||||||||||||||||| ||| ||| || ||||||| |||       |||||| ||| |||||| | | ||||||||||||||||    
T  27164908 gagaaatgatatttgtacaatcaatttgtgacaacttttgtataactttctctctcatactcacatgatggtcttatcctctctcttcctt 27164818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 28081853 - 28081808
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| | ||||||||| ||||||    
T  28081853 gagaaatgatatttgtacaaccattttgtaataatttttttacaac 28081808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 37848683 - 37848654
Alignment:
Q  128 tatgagaaatgatatttgtacaatcatttt 157  Q
    ||||||||||||||||||||||||||||||    
T  37848683 tatgagaaatgatatttgtacaatcatttt 37848654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 43079703 - 43079658
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| || ||| |||||||||||| |||||    
T  43079703 gagaaatgatatttgtacaaccactttgtgataatttttggacaac 43079658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 2849597 - 2849553
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||| ||||||||||||||||||||| ||||| |||||| |||||    
T  2849597 attaagagaaatgatatttgtacaattattttttgataacttttg 2849553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 3144022 - 3143986
Alignment:
Q  133 gaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  3144022 gaaataatatttgtacaatcattttataataattttt 3143986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 3247067 - 3247107
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||||  ||| |||||||    
T  3247067 atgagaaatgatatttgtacaatcatttagtgacaattttt 3247107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 159
Target Start/End: Original strand, 9363387 - 9363415
Alignment:
Q  131 gagaaatgatatttgtacaatcattttat 159  Q
    |||||||||||||||||||||||||||||    
T  9363387 gagaaatgatatttgtacaatcattttat 9363415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 10015025 - 10014981
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||  ||||||||||||| |||| |||||    
T  10015025 agaaatgatatttgtacaactattttatgataatatttggacaac 10014981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 21153052 - 21153088
Alignment:
Q  133 gaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||| | |||||||||    
T  21153052 gaaatgatatttgtacaatcattttctaataattttt 21153088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 23329900 - 23329940
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||| |||||||||| |||||||| |||||||||    
T  23329900 atgagaaatgacatttgtacaaccattttattataattttt 23329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 159
Target Start/End: Complemental strand, 27070739 - 27070711
Alignment:
Q  131 gagaaatgatatttgtacaatcattttat 159  Q
    |||||||||||||||||||||||||||||    
T  27070739 gagaaatgatatttgtacaatcattttat 27070711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 159
Target Start/End: Original strand, 27207574 - 27207602
Alignment:
Q  131 gagaaatgatatttgtacaatcattttat 159  Q
    |||||||||||||||||||||||||||||    
T  27207574 gagaaatgatatttgtacaatcattttat 27207602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 31487188 - 31487228
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||  ||||| |||||||||||||||||    
T  31487188 atgagaaatgatatttcaacaattattttatgataattttt 31487228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 38218410 - 38218374
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  38218410 agaaatgatatttgtacaatcattttgtgacaatttt 38218374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 43255634 - 43255594
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||| ||||| ||| |||||||||||||    
T  43255634 aatgatatttgtacaattattttgtgacaatttttgtacaa 43255594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 48383388 - 48383344
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||| |||||||| | ||||||| ||||||    
T  48383388 agaaatgatatttgtacaaccattttattacaatttttatacaac 48383344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 36669441 - 36669341
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||       |||||| ||| |||||||||| ||||||||||||||||  |||||||    
T  36669441 gagaaatgatatttgtacaatcaatttgtgataatttttgtacaactttttctctcatactcacatgatgtttttatcctctctcttcctttttctctct 36669342  T
Q  231 c 231  Q
    |    
T  36669341 c 36669341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 45863797 - 45863752
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||    
T  45863797 attatgagaaatgatatttgtacaattattttttgataatttttgt 45863752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 49699826 - 49699785
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  49699826 tatgagaaatgatatttgtacaaccattttatgataattttt 49699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 25995459 - 25995560
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctc 229  Q
    |||||||||||||||||||||||| ||| ||| || |||||||||||       |||||| ||| |||||| | | ||||||||||||||||  ||||||    
T  25995459 tgagaaatgatatttgtacaatcaatttgtgacaagttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctctc 25995558  T
Q  230 tc 231  Q
    ||    
T  25995559 tc 25995560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 29362765 - 29362718
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||    
T  29362765 atgagaaatgatatttgtacaatcaatttatgacaacttttgtacaac 29362718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 30547353 - 30547400
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  30547353 atgagaaatgatatttgtacgatcaatttatgataatttttatacaac 30547400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 45350171 - 45350128
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  45350171 attatgagaaatgatatttgtacaattattttgtgataattttt 45350128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 40118788 - 40118742
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||||||||||||   |||||||||||||||    
T  40118788 atgagaaatgatatttgtacaatcatttttgtataatttttgtacaa 40118742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 43755749 - 43755711
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43755749 gagaaatgatatttgtacaaccattttatgataattttt 43755711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 48679024 - 48678986
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  48679024 gagaaatgatatttgtacaatcattttatgacaattttt 48678986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 2855031 - 2854987
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||    
T  2855031 gagaaatgatatttgtacattcattttatgacaacttttgtacaa 2854987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 6841787 - 6841827
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  6841787 atgagaaatcatatttgtacaaacattttatgataattttt 6841827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 26585249 - 26585144
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatc 225  Q
    |||| ||||||||||||||||||||  ||||| |||||| |||||||||||       |||||| ||  |||||| | | ||||||||||||||||  ||    
T  26585249 attaagagaaatgatatttgtacaactattttgtgataacttttgtacaactttttctctcataatcgcatgatggtcttatcctctctcttcctttttc 26585150  T
Q  226 tctctc 231  Q
    ||||||    
T  26585149 tctctc 26585144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 26839383 - 26839427
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||    
T  26839383 agaaatggtatttgtacaaccattttatgataacttttgtacaac 26839427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 29706774 - 29706734
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  29706774 gagaaatgatatttgtacaaccattttatgataacttttgt 29706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 32873341 - 32873385
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||    
T  32873341 gagaaatgatatttgtacatccattttatgataacttttgtacaa 32873385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 35026891 - 35026927
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattt 167  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35026891 gagaaatgatatttgtataatcattttatgataattt 35026927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 49645362 - 49645406
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||    
T  49645362 gagaaatgatatttgtataatcattttatgacaacttttgtacaa 49645406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 1922495 - 1922456
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  1922495 agaaatgatatttgtacaatcactttttgataatttttgt 1922456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 2827781 - 2827681
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||| ||    ||||||||||||||||       |||||| ||| || ||||||| || |||||||||||||  |||||||    
T  2827781 gagaaatgatatttgtacaatcaattcggtataatttttgtacaactttctctctcatactcacattatgtttttattctctctcttcctttttctctct 2827682  T
Q  231 c 231  Q
    |    
T  2827681 c 2827681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 13079026 - 13078983
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||| ||||||||||||| || ||||||||||||||||||    
T  13079026 attatgagtaatgatatttgtagaaccattttatgataattttt 13078983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 26101394 - 26101433
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  26101394 gagaaatgatatttgtacaattattttgtgataatttttg 26101433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 29489430 - 29489330
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||||       |||||| ||| |||||| | | ||||||||||||| ||  |||||||    
T  29489430 gagaaatgatatttgtacaaccattttgtgataactttggtacaactttctctctcatactcacatgatggtcttatcctctctcttcttttttctctct 29489331  T
Q  231 c 231  Q
    |    
T  29489330 c 29489330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 42256460 - 42256560
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| |||||| ||| || ||| |||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctctct 42256559  T
Q  231 c 231  Q
    |    
T  42256560 c 42256560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 42615859 - 42615898
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  42615859 tgagaaatgatatttgtacaatcattttttaataattttt 42615898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 586899 - 586937
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  586899 gagaaatgatatttgtacaatcactttgtgataattttt 586937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 835874 - 835916
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||| | | ||||||||||||||    
T  835874 aaatgatatttgtacaatcattttgttacaatttttgtacaac 835916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 3919299 - 3919345
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||| |||||| | |||||||||| |||||    
T  3919299 tgagaaatgatatttgtacaaccattttgttataatttttggacaac 3919345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 23554751 - 23554789
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  23554751 gagaaatgatatttgtacaaccattttttgataattttt 23554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 25130706 - 25130793
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttcctt 221  Q
    |||||||||||||||||||| ||| ||| || |||||||||||       |||||| ||| |||||| | | ||||||||||||||||    
T  25130706 aaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctctcatactcacatgatgatcttatcctctctcttcctt 25130793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 25586559 - 25586593
Alignment:
Q  135 aatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||| ||||||||||||    
T  25586559 aatgatatttgtacaatcatttgatgataattttt 25586593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 25994984 - 25994942
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||| ||||| |||||||||||| |||||    
T  25994984 aaatgatatttgtacaattattttgtgataatttttggacaac 25994942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 31847257 - 31847223
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataa 164  Q
    ||||||||||||||||||||| |||||||||||||    
T  31847257 tgagaaatgatatttgtacaaccattttatgataa 31847223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 32926261 - 32926299
Alignment:
Q  133 gaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  32926261 gaaatgatatttgaacaatcattttatgataacttttgt 32926299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 34157805 - 34157851
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||| ||| ||||| |||||||||||| |||||    
T  34157805 tgagaaatgatatttgtataattattttgtgataatttttggacaac 34157851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 37690428 - 37690466
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  37690428 tgagaaatgatatttgtacaatcactttatgacaatttt 37690466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 5771820 - 5771779
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  5771820 tgagaaatgatatttgaacaatcactttttgataatttttgt 5771779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 11947790 - 11947835
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||| |||||||||||||||||||| |||||||||| || ||||||    
T  11947790 attaagagaaatgatatttgtacaaccattttatgacaacttttgt 11947835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 13813556 - 13813658
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctct 228  Q
    |||||||||||||||||||||| || ||| ||| || || ||||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||    
T  13813556 atgagaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctct 13813655  T
Q  229 ctc 231  Q
    |||    
T  13813656 ctc 13813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 27352630 - 27352675
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| |||||| ||||| |||||    
T  27352630 gagaaatgatatttgtacaaccattttgtgataacttttggacaac 27352675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 37669395 - 37669424
Alignment:
Q  128 tatgagaaatgatatttgtacaatcatttt 157  Q
    ||||||||||||||||||||||||||||||    
T  37669395 tatgagaaatgatatttgtacaatcatttt 37669424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 40139123 - 40139156
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatga 161  Q
    ||||||||||||||||||||||| ||||||||||    
T  40139123 tatgagaaatgatatttgtacaaccattttatga 40139156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 41029066 - 41029029
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  41029066 agaaatgatatttgtacaatcattttgtgataaatttt 41029029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 7372019 - 7371975
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||  | ||||||| |||||||||||||    
T  7372019 gagaaatgatatttgtacaactaatttatgacaatttttgtacaa 7371975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 12306205 - 12306165
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||| ||||||| | |||||||||    
T  12306205 gagaaatgatatttgtacaattattttataacaatttttgt 12306165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 15419248 - 15419292
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||||||||||||| |||| |||||| ||||| |||||    
T  15419248 attatgagaaatgatatttgtgcaattattttaggataagttttg 15419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 16836177 - 16836149
Alignment:
Q  129 atgagaaatgatatttgtacaatcatttt 157  Q
    |||||||||||||||||||||||||||||    
T  16836177 atgagaaatgatatttgtacaatcatttt 16836149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 26159441 - 26159481
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  26159441 gagaaatgatatttgaacaatcattttttgacaatttttgt 26159481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 27357505 - 27357545
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||| ||| ||| |||||||||||||||||    
T  27357505 atgagaaatgatattcgtataattattttatgataattttt 27357545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 28457420 - 28457392
Alignment:
Q  129 atgagaaatgatatttgtacaatcatttt 157  Q
    |||||||||||||||||||||||||||||    
T  28457420 atgagaaatgatatttgtacaatcatttt 28457392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 30535991 - 30536031
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||||||| | | |||||||||    
T  30535991 gagaaatgatatttgtacaatcattttttaacaatttttgt 30536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 33125394 - 33125354
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  33125394 gagaaatgatatttgaacatccattttatgataatttttgt 33125354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 41885721 - 41885765
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  41885721 gagaaatgatatttgtacaattattttgtgatagtttttatacaa 41885765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 52714979 - 52715023
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||| ||| || |||| ||||||    
T  52714979 agaaatgatatttgtacaatcattttgtgacaacttttttacaac 52715023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 54801558 - 54801514
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  54801558 gagaaatgatatttgtacaatcattttattataatttttgtacaa 54801514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 24235320 - 24235420
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||       |||||| ||| || ||| ||| ||||||||||||||||  |||||||    
T  24235320 gagaaatgatatttgtacaatcaatttgtgacaatttttgtacaactttctctctcatactcacataatggttttatcctctctcttcctttttctctct 24235419  T
Q  231 c 231  Q
    |    
T  24235420 c 24235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 19879776 - 19879817
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  19879776 aaatgatatttgtacaatcattttatgataatttttgaacaa 19879817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 35661668 - 35661578
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttcctt 221  Q
    |||||||||||||||||||| |||||||||| |||||||  |||||       |||||| ||| || ||||||| ||||||||||||||||    
T  35661668 gagaaatgatatttgtacaaccattttatgacaatttttagacaacactttctctcatactcacattatgtttttatcctctctcttcctt 35661578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 30866351 - 30866391
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  30866351 atgagaaatgatatttgtacaatcattttatgataaatttt 30866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 3475867 - 3475914
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||    
T  3475867 atgagaaatgatatttgtacaaccattttatgacaacttttgtacaac 3475914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 40722035 - 40721935
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||  |||||||| |||||||||| |||||       |||||| ||| |||||||| |  |||||||||||||||  |||||||    
T  40722035 gagaaatgatatttgtacatccattttataataatttttggacaactttctctctcatactcacatgatgttcttttcctctctcttcctttttctctct 40721936  T
Q  231 c 231  Q
    |    
T  40721935 c 40721935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 35332702 - 35332744
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  35332702 ttatgagaaatgatatttgtacaaccactttatgataattttt 35332744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 40335785 - 40335827
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  40335785 ttatgagaaatgatatttgtacaatcattttattacaattttt 40335827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 40258203 - 40258244
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  40258203 atgagaaatgatatttatacaaccattttatgataatttttg 40258244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 32901326 - 32901374
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||  ||||| |||||||||||| |||||    
T  32901326 tatgagaaatgatatttgtacaactattttttgataatttttgcacaac 32901374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 39158105 - 39158145
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  39158105 gagaaatgatatttgaacaatcattttttgataatttttgt 39158145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 149559 - 149516
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||    
T  149559 tatgagaaatgatatttgaacaatcactttttgataatttttgt 149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 2615198 - 2615155
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||| | |||||| ||||||||||||||||    
T  2615198 agaaatgatatttgtacatttattttacgataatttttgtacaa 2615155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 5208398 - 5208298
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| || ||| ||| || |||||||||||       |||||| ||| || ||| ||| ||||||||||||||||  |||||||    
T  5208398 gagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacattatgattttatcctctctcttcctttttctctct 5208299  T
Q  231 c 231  Q
    |    
T  5208298 c 5208298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 9032778 - 9032825
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||||| ||| ||| || |||||||||||    
T  9032778 atgagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 9032825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 29384269 - 29384230
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  29384269 tgagaaatgatatttgtacaatcactttatgacaattttt 29384230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 40308444 - 40308479
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||| |||||||||    
T  40308444 aaatgatatttgtacaatcattttataataattttt 40308479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 55268072 - 55267972
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| || ||| ||| || |||||||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||||    
T  55268072 gagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttatctctcatactcacatgatgatcttatcctctctcttcctttttctctct 55267973  T
Q  231 c 231  Q
    |    
T  55267972 c 55267972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 157
Target Start/End: Complemental strand, 3078983 - 3078953
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcatttt 157  Q
    |||||||||||||||||||||||||||||||    
T  3078983 ttatgagaaatgatatttgtacaatcatttt 3078953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 3222980 - 3223034
Alignment:
Q  122 tttcattatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||| | ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  3222980 tttcataaagagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 3223034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 12074222 - 12074184
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  12074222 gagaaatgatatttgtacaaccattttatgacaattttt 12074184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 23094376 - 23094414
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  23094376 gagaaatgatatttgtacaatcattttgtgataactttt 23094414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 28203392 - 28203430
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  28203392 gagaaatgatatttgtacaatcattttgtaataattttt 28203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 31559538 - 31559572
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataat 165  Q
    ||||||||||||||||||||||||||| |||||||    
T  31559538 gagaaatgatatttgtacaatcattttttgataat 31559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 31804400 - 31804362
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  31804400 gagaaatgatatttgtacaatcactttgtgataattttt 31804362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 36444466 - 36444428
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  36444466 gagaaatgatatttgtacaaccattttatgataactttt 36444428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 46282446 - 46282404
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||    
T  46282446 atgagtaatgatatttgtacactcatttgatgataatttttgt 46282404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 46480577 - 46480531
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||||| | ||| || ||||||||||||||    
T  46480577 atgagaaatgatatttgtacaattaatttgtggtaatttttgtacaa 46480531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 51160709 - 51160667
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    ||||||||||||||||||||| |||||||||| || |||||||    
T  51160709 tgagaaatgatatttgtacaaacattttatgacaacttttgta 51160667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 53662499 - 53662412
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttc 218  Q
    ||||||||||||||||||||  ||||| | | ||||||||||||||       |||||||||| |||||||| | || ||||||||||    
T  53662499 gagaaatgatatttgtacaactattttgtaacaatttttgtacaactttctctctcatattcacatgatgttcttattctctctcttc 53662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 1987784 - 1987739
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||||  | ||||||||||||||    
T  1987784 gagaaatgatatttgtacaaccattttagtacaatttttgtacaac 1987739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 14113683 - 14113646
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  14113683 aaatgatatttatacaatcattttatgacaatttttgt 14113646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 15638161 - 15638206
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||||||| ||| || ||||| |||||    
T  15638161 gagaaatgatatttgtacaatcattttttgacaacttttgcacaac 15638206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 24088635 - 24088590
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||||||| || ||||| |||||    
T  24088635 gagaaatgatatttgtacaaccattttatgacaacttttgaacaac 24088590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 157
Target Start/End: Complemental strand, 28899278 - 28899249
Alignment:
Q  128 tatgagaaatgatatttgtacaatcatttt 157  Q
    ||||||||||||||||||||||||||||||    
T  28899278 tatgagaaatgatatttgtacaatcatttt 28899249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 32392290 - 32392249
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  32392290 gagaaatgatatttgtgcaatcatattgtgataatttttgta 32392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 33484175 - 33484134
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||| |||||| |||||||||||| |||||    
T  33484175 aatgatatttgtacaaccattttgtgataatttttggacaac 33484134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 36123532 - 36123503
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttat 159  Q
    ||||||||||||||||||||||||||||||    
T  36123532 tgagaaatgatatttgtacaatcattttat 36123503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 41609750 - 41609705
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||  |||||||||| || |||||||||||    
T  41609750 gagaaatgatatttgtacatccattttatgacaacttttgtacaac 41609705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 44368273 - 44368228
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  44368273 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 44368228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 45521650 - 45521605
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||  |||||||||| || |||||||||||    
T  45521650 gagaaatgatatttgtacatccattttatgacaacttttgtacaac 45521605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 45548854 - 45548817
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  45548854 agaaatgatatttgtacaaccattttgtgataattttt 45548817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 47105911 - 47105956
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||| | ||| |||||| |||||||||||    
T  47105911 gagaaatgatatttgtacaattaatttgtgataacttttgtacaac 47105956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 51107512 - 51107467
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||||   |||||||||| |||||    
T  51107512 gagaaatgatatttgtacaatcatttttgtataatttttgcacaac 51107467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 52669680 - 52669635
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| || ||| |||||| |||||||||||    
T  52669680 gagaaatgatatttgtacaaacaatttgtgataacttttgtacaac 52669635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 53384407 - 53384354
Alignment:
Q  122 tttcattatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||| ||| ||||||||||||||||||||||| ||| | |||| ||||||||||    
T  53384407 tttctttaagagaaatgatatttgtacaatcaatttgtaataacttttgtacaa 53384354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 2738339 - 2738299
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  2738339 gagaaatgatatttgaacaatcattttttgacaatttttgt 2738299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 2788641 - 2788601
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||| |||||||||||||||||||||||||  |||||||||    
T  2788641 atgaaaaatgatatttgtacaatcattttagtataattttt 2788601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 157
Target Start/End: Original strand, 4550332 - 4550360
Alignment:
Q  129 atgagaaatgatatttgtacaatcatttt 157  Q
    |||||||||||||||||||||||||||||    
T  4550332 atgagaaatgatatttgtacaatcatttt 4550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 6686047 - 6686091
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||| ||||| | ||||||| ||||||||||||||||    
T  6686047 agaaatgatattcgtacatttattttataataatttttgtacaac 6686091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 21392570 - 21392610
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||||||||| | |||||||||||    
T  21392570 gagaaatgatatttgaacaatcattttgtaataatttttgt 21392610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 32464674 - 32464638
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||||||||  ||||||||||||||||    
T  32464674 agaaatgatatttgtacaactattttatgataatttt 32464638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 39881103 - 39881075
Alignment:
Q  129 atgagaaatgatatttgtacaatcatttt 157  Q
    |||||||||||||||||||||||||||||    
T  39881103 atgagaaatgatatttgtacaatcatttt 39881075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 42178122 - 42178082
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||||||||||||||||||||| | ||| ||||||||    
T  42178122 tgagaaatgatatttgtacaatcattatgtgacaatttttg 42178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 44134379 - 44134347
Alignment:
Q  135 aatgatatttgtacaatcattttatgataattt 167  Q
    |||||||||||||| ||||||||||||||||||    
T  44134379 aatgatatttgtacgatcattttatgataattt 44134347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 46523676 - 46523711
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46523676 agaaatgatatttgtacaatca-tttatgataatttt 46523711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 53463141 - 53463101
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||| |||||||| | |||||||||    
T  53463141 gagaaatgatatttgtacaaccattttataacaatttttgt 53463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 54921729 - 54921693
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  54921729 aatgatatttgaacaatcatttgatgataatttttgt 54921693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 55960187 - 55960227
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||| |||||| ||||||| |||||||||    
T  55960187 atgagaaatgatatttatacaattattttattataattttt 55960227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 5096026 - 5095979
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  5096026 atgagaaatgatatttgtacaatcattttgtgataatttttggacaac 5095979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 6328664 - 6328754
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttc 218  Q
    ||||||||||||||||||||||| ||||||   ||||||||||||||||       |||||||||| || ||||||| || ||||||||||    
T  6328664 tatgagaaatgatatttgtacaaccattttggtataatttttgtacaactttctctctcatattcacattatgtttttattctctctcttc 6328754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 38246821 - 38246732
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttcctt 221  Q
    |||||||||||||||||||||| ||| ||| |||||||||| |||       |||||| |||||||||| | | ||||||||||||||||    
T  38246821 agaaatgatatttgtacaatcaatttgtgacaatttttgtagaactttctctctcatactcatatgatggtcttatcctctctcttcctt 38246732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 12784473 - 12784430
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  12784473 tatgagaaatgatatttgtacaaccattttataataatttttgt 12784430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 34144622 - 34144522
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| || ||| ||| ||||||||||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||||    
T  34144622 gagaaatgatatttgtacaaccaatttgtgacaatttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctctct 34144523  T
Q  231 c 231  Q
    |    
T  34144522 c 34144522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 44484727 - 44484627
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| |||||| | | ||||||||||||||       |||||| ||| |||||||| | ||| ||||||||||||  |||||||    
T  44484727 gagaaatgatatttgtacaaccattttgtaacaatttttgtacaactttctctctcatactcacatgatgttcttatcatctctcttcctttttctctct 44484628  T
Q  231 c 231  Q
    |    
T  44484627 c 44484627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 3771369 - 3771411
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  3771369 atgagaaatgatatttgtacaatcattttttaataatttttgt 3771411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 41353568 - 41353530
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  41353568 gagaaatgatatttgtacaatcaatttatgataattttt 41353530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 11152770 - 11152725
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||||   ||||||||||||||||    
T  11152770 gagaaatgatatttgtacaatcatttttatataatttttgtacaac 11152725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21313556 - 21313515
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  21313556 tgagaaatgatatttgtacaatcattctttgataatttttgt 21313515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 21738692 - 21738647
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||    
T  21738692 attatgagaaatgatatttgtacaaccattttctaataatttttgt 21738647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 33559635 - 33559684
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||| |||||||  |||||||||| |||||    
T  33559635 ttatgagaaatgatatttgtacaaccattttagtataatttttggacaac 33559684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 30416359 - 30416399
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  30416359 tgagaaatgatatttgtacaatcattttttgacaatttttg 30416399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 3196158 - 3196058
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||       |||||| ||| |||||| | | ||| ||||||||||||  |||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctctcatactcacatgatgatcttatcatctctcttcctttttctctct 3196059  T
Q  231 c 231  Q
    |    
T  3196058 c 3196058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 3924197 - 3924158
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  3924197 tgagtaatgatatttgtacaattattttatgataattttt 3924158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 5962640 - 5962683
Alignment:
Q  133 gaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||| | |||||||||||| |||||    
T  5962640 gaaatgatatttgtacaatcattatgtgataatttttggacaac 5962683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 13850257 - 13850210
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||| ||||||||||||   ||||||||||||||||    
T  13850257 atgagaaatgatatttatacaatcattttgatataatttttgtacaac 13850210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 18749436 - 18749389
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||||    
T  18749436 atgagaaatgatatttgtacaaccatttttgtataatttttgtacaac 18749389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 23048156 - 23048113
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    ||||||||||||||||||||||||| |||  |||||||||||||    
T  23048156 atgagaaatgatatttgtacaatcaatttgagataatttttgta 23048113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 36383462 - 36383562
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||  ||||| ||| || |||||||||||       |||||| ||| |||||||| | ||| ||||||||||||  |||||||    
T  36383462 gagaaatgatatttgtacaaagattttgtgacaacttttgtacaactttctctctcatactcacatgatgttcttatcatctctcttcctttttctctct 36383561  T
Q  231 c 231  Q
    |    
T  36383562 c 36383562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 41212949 - 41212984
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||| |||||||||    
T  41212949 aaatgatatttgtacaatcattttattataattttt 41212984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 45693536 - 45693501
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||| |||||||||||||||||    
T  45693536 aaatgatatttgtacaattattttatgataattttt 45693501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 2013356 - 2013318
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  2013356 gagaaatgatatttgtacattcattttatgacaattttt 2013318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 18373847 - 18373877
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatga 161  Q
    |||||||||||||||||||||||||||||||    
T  18373847 gagaaatgatatttgtacaatcattttatga 18373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 34442113 - 34442151
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| || |||||||||||||||    
T  34442113 gagaaatgatatttgtacaaccactttatgataattttt 34442151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 35334519 - 35334561
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    ||||||||||||||||||||| |||||||| |||| |||||||    
T  35334519 tgagaaatgatatttgtacaaccattttataataacttttgta 35334561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Original strand, 37601226 - 37601256
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatga 161  Q
    |||||||||||||||||||||||||||||||    
T  37601226 gagaaatgatatttgtacaatcattttatga 37601256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 38257365 - 38257327
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  38257365 tgagaaattatatttgtacattcattttatgataatttt 38257327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 7595264 - 7595309
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||| |||||| | ||| ||||||||||||||||||    
T  7595264 gagaaatgatatttatacaataaatttgtgataatttttgtacaac 7595309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 12256901 - 12256946
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||||   |||| |||||||||||    
T  12256901 gagaaatgatatttgtacaatcatttttgtataacttttgtacaac 12256946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 18508078 - 18508119
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    |||||||||||||||||||  ||||||||||||| |||||||    
T  18508078 gagaaatgatatttgtacatccattttatgataacttttgta 18508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 27307302 - 27307257
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||||    
T  27307302 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaac 27307257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 32869829 - 32869866
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  32869829 aaatgatatttgaacattcattttatgataatttttgt 32869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 35171297 - 35171252
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| ||| |||||| |||||||    
T  35171297 gagaaatgatatttgtacaaccattttgtgacaattttggtacaac 35171252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 36816490 - 36816449
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||| |||||  |||||||||||||||||    
T  36816490 tatgagaaatgatatttatacaactattttatgataattttt 36816449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 40371119 - 40371164
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||| ||||||||||   ||||||||||||||||||||||||    
T  40371119 gagaaatgttatttgtacatctattttatgataatttttgtacaac 40371164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 43691055 - 43691018
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  43691055 aaatgatatttgttcaattattttatgataatttttgt 43691018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 4319769 - 4319809
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  4319769 gagaaatgatatttgtacaactattttataataatttttgt 4319809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 5361798 - 5361834
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||||||||||||||||||| | ||||||||||    
T  5361798 aaatgatatttgtacaatcattttctaataatttttg 5361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 9634507 - 9634467
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  9634507 gagaaatgatatttgaacatccattttatgataatttttgt 9634467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 13553147 - 13553191
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||| || ||| |||||||||||| ||||    
T  13553147 gagaaatgatatttgtacaaccactttgtgataatttttggacaa 13553191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 23391072 - 23391116
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||| | ||| ||||||||||| |||||    
T  23391072 gagaaatgatatttgtacaattaatttgtgataatttttatacaa 23391116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 34373006 - 34373050
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||    
T  34373006 agaaatgatatttgtacaaccattttggtataatttttgtacaac 34373050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 38571939 - 38571983
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||||||| ||| | |||||||| ||||    
T  38571939 gagaaatgatatttgtacaatcattatattacaatttttgaacaa 38571983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 30420624 - 30420670
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||    
T  30420624 atgagaaatgatatttgtacatccattttatgataatttttgtacaa 30420670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 8681841 - 8681882
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  8681841 atgagaaatgatatttgtacaatcattttttgataatttttg 8681882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 27005550 - 27005505
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  27005550 gagaaatgatatttgtacaattattttttgataatttttgtacaac 27005505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 38010872 - 38010972
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||        |||||| ||| |||||| | | ||||||||||||||||  |||||||    
T  38010872 gagaaatgatatttgtacaatcaatttgtgataacttttgtacaattttctctctcatactcacatgatggtcttatcctctctcttcctttttctctct 38010971  T
Q  231 c 231  Q
    |    
T  38010972 c 38010972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 25345340 - 25345381
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  25345340 gagaaatgatatttgtacaattaatttatgataatttttgta 25345381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 28501592 - 28501637
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgacaatttttgtacaac 28501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 31626147 - 31626102
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||||   ||||||||||||||||    
T  31626147 gagaaatgatatttgtacaatcattttggtataatttttgtacaac 31626102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 34400619 - 34400656
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34400619 agaaatgatatttgtacaatcattttatgacaattttt 34400656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 6538868 - 6538908
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  6538868 atgagaaatgatatttgtacaattattttgtgataattttt 6538908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 6940221 - 6940181
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  6940221 gagaaatgatatttgtacaaccattttataataatttttgt 6940181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 32912038 - 32912078
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  32912038 gagaaatgatatttgaacattcattttatgataatttttgt 32912078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 34693287 - 34693243
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  34693287 gagaaatgatatttgtacaatcatttttgtataatttttgtacaa 34693243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 4954466 - 4954566
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||| | ||| ||| || || ||||||||       |||||| |||||||||| | | ||||||||||||||||  |||||||    
T  4954466 gagaaatgatatttgtacaattaatttgtgacaacttatgtacaactttctctctcatactcatatgatggtcttatcctctctcttcctttttctctct 4954565  T
Q  231 c 231  Q
    |    
T  4954566 c 4954566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 19983840 - 19983879
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  19983840 tgagaaatgatatttgtacaattattttatgacaattttt 19983879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 30103521 - 30103478
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||||||||   |||||||||||||||    
T  30103521 agaaatgatatttgtacaatcatttttgtataatttttgtacaa 30103478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 7144577 - 7144615
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  7144577 gagaaatgatatttgtacaaccattttatgataactttt 7144615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 18395110 - 18395148
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttt 168  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  18395110 tgagagatgatatttgtacaatcattttatgaaaatttt 18395148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 27340869 - 27340907
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  27340869 gagaaatgatatttgtacaatcactttattataattttt 27340907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 40829412 - 40829454
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||| |||||| | |||||||||||    
T  40829412 atgagaaatgatatttgtacaaccattttttaataatttttgt 40829454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 3154710 - 3154669
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||  |||||||||||| |||||||||||    
T  3154710 aatgatatttgtacaactattttatgataacttttgtacaac 3154669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 4820151 - 4820200
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  4820151 ttatgagaaatgatatttgtacatccattttatgacatcttttgtacaac 4820200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 7927355 - 7927392
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  7927355 gagaaatgatatttatacaatcattttgtgataatttt 7927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 11415908 - 11415953
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||| ||||||| |||||| |||||| |||||||||||||||||    
T  11415908 gagaaacgatatttctacaattattttaagataatttttgtacaac 11415953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 17063863 - 17063965
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctct 228  Q
    ||||||||||||||||||||||||||||| ||| || ||||  |||||       |||||| ||| || || |||| || |||||||||||||  |||||    
T  17063863 atgagaaatgatatttgtacaatcattttttgacaacttttaaacaactttatctctcatactcacattatatttttattctctctcttcctttttctct 17063962  T
Q  229 ctc 231  Q
    |||    
T  17063963 ctc 17063965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 20985600 - 20985555
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| ||||||   ||||||||||||||||    
T  20985600 gagaaatgatatttgtacaaccatttttgtataatttttgtacaac 20985555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 27440478 - 27440523
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||||||||||| ||| || ||||| ||||    
T  27440478 tgagaaatgatatttgtacaatcattttgtgacaacttttgaacaa 27440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 30574450 - 30574348
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctct 228  Q
    |||||||||||||||||||||| || ||| ||| || |||||||||||       |||||| ||| |||||| | | ||| ||||||||||||  |||||    
T  30574450 atgagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacatgatggtcttatcatctctcttcctttttctct 30574351  T
Q  229 ctc 231  Q
    |||    
T  30574350 ctc 30574348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 34124620 - 34124661
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  34124620 tgagaaatgatatttgaacatccattttatgataatttttgt 34124661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 35814453 - 35814498
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| |||||| ||| |||||||    
T  35814453 gagaaatgatatttgtacaaccattttgtgataactttggtacaac 35814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 372455 - 372415
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||| |||||||| |||||| ||||    
T  372455 gagaaatgatatttgtacaaccattttataataattgttgt 372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 9933497 - 9933545
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||| ||| ||||||||||| || ||||| |||||    
T  9933497 tatgagaaatgatatttgaacattcattttatgacaacttttgaacaac 9933545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 18511872 - 18511828
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||||||    
T  18511872 attaagagaaatgatatttgaacattcattttgtgataatttttg 18511828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 19840057 - 19840017
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  19840057 gagaaatgatatttgaacattcattttatgacaatttttgt 19840017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 19982057 - 19982017
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  19982057 gagaaatgatattttaacaatcattttttgataatttttgt 19982017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 21012568 - 21012608
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||| |||||||||||| |||||||||| |||||||||    
T  21012568 gagaaattatatttgtacaaccattttatgacaatttttgt 21012608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 27271122 - 27271078
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||| || || ||||||| |||||||||||||    
T  27271122 gagaaatgatatttgtaaaaccaatttatgacaatttttgtacaa 27271078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 27546063 - 27546103
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||||||||||||| || ||||||    
T  27546063 gagaaatgatatttgaacaatcattttatgacaaattttgt 27546103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 27931337 - 27931377
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  27931337 tgagaaataaaatttgtacaattattttatgataatttttg 27931377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 28501628 - 28501705
Alignment:
Q  142 tttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttcc 219  Q
    ||||||||| |||||| ||| ||||||||||||||       |||||||||| |||||||| | ||| ||||||||||    
T  28501628 tttgtacaaccattttgtgacaatttttgtacaactttctctctcatattcacatgatgttcttatcatctctcttcc 28501705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 33901963 - 33901927
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  33901963 aatgatatttgaacaaccattttatgataatttttgt 33901927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 33958331 - 33958291
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  33958331 gagaaatgatatttgaacaatcatttttggataatttttgt 33958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 35464654 - 35464610
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||    
T  35464654 gagaaatgatatttgtacgattattttttgataatttttgaacaa 35464610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 41984351 - 41984307
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||  | |||||||||||| |||||    
T  41984351 agaaatgatatttgtacaatcataatctgataatttttggacaac 41984307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 11327106 - 11327208
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctct 228  Q
    |||||||||||||||||||||| |||||| ||| || |||||||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||    
T  11327106 atgagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctct 11327205  T
Q  229 ctc 231  Q
    |||    
T  11327206 ctc 11327208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 1402640 - 1402695
Alignment:
Q  121 atttcattatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||| ||||||||||||||||||||||  |||||||||| || |||||||||||    
T  1402640 atttcaatatgagaaatgatatttgtacatccattttatgacaacttttgtacaac 1402695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 9311037 - 9311080
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  9311037 tatgagaaatgatatttgtacaatcattttctgataatatttgt 9311080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 39901591 - 39901630
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  39901591 gagaaatgatatttgtacaatcattttttgataatttttg 39901630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 44910687 - 44910738
Alignment:
Q  121 atttcattatgagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| |||||||    
T  44910687 atttcatttagagaaatgatatttgtacattcattttatgataacttttgta 44910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 52100259 - 52100306
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||    
T  52100259 atgagaaatgatatttgtacaaccattttttaataatttttgtacaac 52100306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 51230682 - 51230640
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  51230682 tatgagaaaagatatttgtacaaccattttatgataatttttg 51230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 52727519 - 52727481
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  52727519 gagaaatgatatttgtacaatcactttatgataattttt 52727481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 29222468 - 29222427
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  29222468 aaatgatatttatacaatcattttatgataatttttgaacaa 29222427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 29525232 - 29525277
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||    
T  29525232 tgagaaatgatatttgtacattcattttatgacaacttttgtacaa 29525277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 40419712 - 40419675
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||| |||||||||||    
T  40419712 agaaatgatatttgtacaatcattttgtgataattttt 40419675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 53473610 - 53473655
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||    
T  53473610 gagaaatgatatttgtacaatcaatttgtgataacttttgtacaac 53473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 349484 - 349444
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  349484 gagaaatgatatttgtacaaccattttataataatttttgt 349444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 25559703 - 25559804
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctc 229  Q
    ||||||||||||||||||||| ||||||   ||||||||| ||||||       ||||||||||||| ||||||| || |||| ||||| ||  ||||||    
T  25559703 tgagaaatgatatttgtacaaccattttggtataatttttatacaactttctctctcatattcatattatgtttttattctctatcttcatttttctctc 25559802  T
Q  230 tc 231  Q
    ||    
T  25559803 tc 25559804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 48205045 - 48205089
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  48205045 gagaaatgatatttgtacaatcatttttgtataatttttgtacaa 48205089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 50280159 - 50280058
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctc 229  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||        ||||||||| ||||||   | ||||||||||||||||  ||||||    
T  50280159 tgagaaatgatatttgtacaaccattctatgacaacttttgtacaactttctctttcatattcacatgatggacttatcctctctcttcctttttctctc 50280060  T
Q  230 tc 231  Q
    ||    
T  50280059 tc 50280058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 7285 - 7185
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    ||||||||||||||||||||||||||| ||| || ||||| |||||       |||||| ||| || || || | ||||||||||||||||  |||||||    
T  7285 gagaaatgatatttgtacaatcattttctgacaacttttggacaactttctctctcatactcacattatattcttatcctctctcttcctttttctctct 7186  T
Q  231 c 231  Q
    |    
T  7185 c 7185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 13159657 - 13159761
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatct 226  Q
    |||||||||||||||| |||||||| | ||| ||| || |||||||||||       |||||| |||||||||| | | ||| ||||||||||||  |||    
T  13159657 ttatgagaaatgatatctgtacaattaatttgtgacaacttttgtacaactttctctctcatactcatatgatggtcttatcgtctctcttcctttttct 13159756  T
Q  227 ctctc 231  Q
    |||||    
T  13159757 ctctc 13159761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 21239149 - 21239110
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  21239149 gagaaatgatatttgtacaactattttatgataatttttg 21239110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 22836263 - 22836228
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22836263 aaatgatatttgtacaaccattttatgataattttt 22836228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 28300285 - 28300324
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  28300285 tgagaaatgatatttgtacaaccattttattataattttt 28300324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 29373924 - 29373959
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||||| |||||||    
T  29373924 aaatgatatttgtacaatcattttatgacaattttt 29373959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 169
Target Start/End: Complemental strand, 32622435 - 32622396
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  32622435 tgagaaatgatatttatacaatcattttttgataattttt 32622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 27198231 - 27198193
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  27198231 gagaaatgatatttgtacaatcattttttgataactttt 27198193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 35755984 - 35756022
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  35755984 gagaaatgatatttgaacaaccattttatgataattttt 35756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 47141672 - 47141626
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||| ||||||   ||||||||||||||||    
T  47141672 tgagaaatgatatttgtacaaccattttggtataatttttgtacaac 47141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 47849672 - 47849710
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  47849672 gagaaatgatatttgtacaaccattttgtgataattttt 47849710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 4189736 - 4189781
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  4189736 tgagaaatgatatttgtagaattattttgtgataatttttgaacaa 4189781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 16267968 - 16267923
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||| ||||||||| | |||||||||| |||||    
T  16267968 gagaaatgatatttgtataatcattttctaataatttttgaacaac 16267923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 20549456 - 20549415
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  20549456 gagaaatgatatttgtacatctattttatgataatttttgta 20549415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 27646498 - 27646543
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||||   |||||||||| |||||    
T  27646498 gagaaatgatatttgtacaatcattttgcaataatttttggacaac 27646543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 34058029 - 34057984
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||| |||  ||||||||||||| ||||||    
T  34058029 attatgagaaatgatatttgaacatccattttatgataacttttgt 34057984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 49761257 - 49761212
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| | | ||||||||||||||    
T  49761257 gagaaatgatatttgtacaaccattttctaacaatttttgtacaac 49761212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 49840140 - 49840111
Alignment:
Q  139 atatttgtacaatcattttatgataatttt 168  Q
    ||||||||||||||||||||||||||||||    
T  49840140 atatttgtacaatcattttatgataatttt 49840111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 53932462 - 53932417
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| ||| |||||||| |||||    
T  53932462 gagaaatgatatttgtacaaccattttgtgacaatttttggacaac 53932417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 7351709 - 7351665
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||| ||||||   |||||||||||||||    
T  7351709 gagaaatgatatttgtacaaccatttttgtataatttttgtacaa 7351665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 19418230 - 19418198
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatga 161  Q
    |||||||||||||||||||||| ||||||||||    
T  19418230 atgagaaatgatatttgtacaaccattttatga 19418198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 20096491 - 20096418
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgtttt 204  Q
    ||||||||||||||||| ||| ||||||||||||| |||  |||||       ||||||||||||| |||||||    
T  20096491 gagaaatgatatttgtataattattttatgataatattttgacaactttctctctcatattcatattatgtttt 20096418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 20893315 - 20893275
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  20893315 atgagaaataatatttgtacaaccattttgtgataattttt 20893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 23869041 - 23869001
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttt 168  Q
    ||||||||||||||||||||||| |||||||| | ||||||    
T  23869041 tatgagaaatgatatttgtacaaccattttataacaatttt 23869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 24095477 - 24095437
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  24095477 gagaaatgatatttgaacatccattttatgataatttttgt 24095437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 34663143 - 34663103
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  34663143 tgagaaatgatatttatacaaatattttatgataatttttg 34663103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 42683827 - 42683867
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  42683827 gagaaatgatatttgaacattcattttgtgataatttttgt 42683867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 43441669 - 43441717
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||| |||| | ||| |||||||| |||||    
T  43441669 tatgagaaatgatatttgtacaaccattatgtgacaatttttgaacaac 43441717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 43499632 - 43499588
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||| || |||||||||| ||||| ||||    
T  43499632 gagaaatgatatttgtacaaccactttatgataacttttggacaa 43499588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 44080670 - 44080706
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||| || |||||||||||    
T  44080670 aatgatatttgtacaatcatttaattataatttttgt 44080706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 14531619 - 14531666
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  14531619 atgagaaatgatatttgtacaactattttatgataacttttgtacaac 14531666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 28756532 - 28756575
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  28756532 tatgagaaatgatatttgtgcaatcattttataataatttttgt 28756575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 30928002 - 30927902
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| || ||| ||| ||||||||||||||       |||||| |||||||||| | | |||||||||||| |||  |||||||    
T  30928002 gagaaatgatatttgtacaaccaatttgtgacaatttttgtacaactttctctctcatactcatatgatggtcttatcctctctctttctttttctctct 30927903  T
Q  231 c 231  Q
    |    
T  30927902 c 30927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 43186298 - 43186341
Alignment:
Q  133 gaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  43186298 gaaatgatatttgtacaattattttgtgataatttttgtacaac 43186341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 20852919 - 20852957
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20852919 gagaaatgatatttgtacaaccattttatgataattttt 20852957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 41675437 - 41675395
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  41675437 aaatgatatttgtacaatcattttttgataatttttttacaac 41675395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 9314411 - 9314456
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||    
T  9314411 gagaaatgatatttgtacatccattttatgacaatttttgtacaac 9314456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 41406930 - 41406889
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  41406930 tatgagaaatgatatttgtacaatcattttttgacaattttt 41406889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 40517266 - 40517306
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  40517266 tatgagaaattatatttgtacaaccattttatgataatttt 40517306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Original strand, 6445175 - 6445214
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  6445175 gagagatgatatttgtacaaccattttatgataatttttg 6445214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 9079933 - 9079894
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttg 170  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  9079933 gagaaatgatatttgtacgatcattttatgacaatttttg 9079894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 18549979 - 18550079
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||||||||||   |||| |||||||||||       |||||| |||||| || || | || |||||||||||||  |||||||    
T  18549979 gagaaatgatatttgtacaatcatttttgtataacttttgtacaacattctctctcatactcatattatcttcttattctctctcttcctttttctctct 18550078  T
Q  231 c 231  Q
    |    
T  18550079 c 18550079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 169
Target Start/End: Original strand, 28732765 - 28732800
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28732765 aaatgatatttatacaatcattttatgataattttt 28732800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 41273515 - 41273615
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctct 230  Q
    |||||||||||||||||||| || ||| ||| || |||||||||||       |||||| ||| |||||| | | ||||||||||||||||  |||||||    
T  41273515 gagaaatgatatttgtacaaacaatttgtgacaacttttgtacaactttctctctcatactcacatgatggtcttatcctctctcttcctttttctctct 41273614  T
Q  231 c 231  Q
    |    
T  41273615 c 41273615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 69662 - 69624
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  69662 gagaaatgatatttgtacaatcactttgtgataattttt 69624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 3950110 - 3950148
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  3950110 gagaaatgatatttgtacaaccattttattataattttt 3950148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 161
Target Start/End: Complemental strand, 8410415 - 8410385
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatga 161  Q
    |||||||||||||||||||||||||||||||    
T  8410415 gagaaatgatatttgtacaatcattttatga 8410385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 12655917 - 12655963
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    |||| |||||||||||||||||||| |||||||| |||| |||||||    
T  12655917 attaagagaaatgatatttgtacaaccattttataataacttttgta 12655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 29913564 - 29913602
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  29913564 gagaaatgatatttgtacaactattttatgataattttt 29913602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 36740314 - 36740352
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  36740314 gagaaatgatatttgtacaatcatttagtgataattttt 36740352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 41344744 - 41344702
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||    
T  41344744 ttatgagaaatgatatttgtacaatcagtttgtgataactttt 41344702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 43873766 - 43873724
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||||| |||||| ||| |||||||    
T  43873766 ttatgagaaatgatatttgtacaaccattttgtgacaattttt 43873724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 7010685 - 7010722
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttt 168  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  7010685 gagaaatgatatttgtacaatcattttttgacaatttt 7010722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 22960489 - 22960452
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataattt 167  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  22960489 tgagaaatgatatttgtacaaccattttaggataattt 22960452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33115905 - 33115946
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||    
T  33115905 gagaaatgatatttgtataattattttgtgataatttttgta 33115946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 33817156 - 33817201
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||| ||| | | ||||||||||||||    
T  33817156 gagaaatgatatttgtacaatcaatttgtaacaatttttgtacaac 33817201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 37568685 - 37568640
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| ||| ||||||| ||||||    
T  37568685 gagaaatgatatttgtacaaacattttgtgacaatttttatacaac 37568640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 39259125 - 39259088
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttt 168  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  39259125 gagaaatgatatttgtacaatcaatttgtgataatttt 39259088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 1268845 - 1268801
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||||||||| | | || |||||||||||    
T  1268845 agaaatgatatttgtacaatcattttgtaagaacttttgtacaac 1268801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 4312548 - 4312588
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||  |||||||||||||||||||    
T  4312548 gagaaatgatatttgaacaactattttatgataatttttgt 4312588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 7118467 - 7118511
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||||||| |||| | ||||||    
T  7118467 agaaatgatatttgtacaattattttatgatcatttctatacaac 7118511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 10344323 - 10344424
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctc 229  Q
    ||||||||||||||||||||   ||||||| |||||||||| |||||       |||||| ||| |||||| | |  |||||||||||||||  ||||||    
T  10344323 tgagaaatgatatttgtacatctattttataataatttttggacaactttctctctcatactcacatgatgctcttttcctctctcttcctttttctctc 10344422  T
Q  230 tc 231  Q
    ||    
T  10344423 tc 10344424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 20703516 - 20703552
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||| || ||||||||||||||||||||||    
T  20703516 aaatgatatttttaaaatcattttatgataatttttg 20703552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 20995128 - 20995084
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||| ||||  |||||||||| ||||||||||||||    
T  20995128 agaaatgatatttatacatccattttatgacaatttttgtacaac 20995084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 23952494 - 23952538
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||| ||||| |||| | ||||||||||    
T  23952494 gagaaatgatatttgtacaattattttgtgatgacttttgtacaa 23952538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Original strand, 26871044 - 26871076
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatga 161  Q
    ||||||||||||||||||||||||| |||||||    
T  26871044 atgagaaatgatatttgtacaatcactttatga 26871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 30112874 - 30112838
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataa 164  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  30112874 tatgagaaattatatttgtacaatcattttgtgataa 30112838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 36064030 - 36064074
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||||||||||||||||||||||||| ||| || ||||| ||||    
T  36064030 gagaaatgatatttgtacaatcattttgtgacaacttttggacaa 36064074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Complemental strand, 36637847 - 36637811
Alignment:
Q  135 aatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||  |||||||||||||    
T  36637847 aatgatatttgtacaatcatttggtgataatttttgt 36637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 40723352 - 40723392
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||| |||||||||||||||||||||| |||| |||||||    
T  40723352 atgagtaatgatatttgtacaatcatttgatgacaattttt 40723392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 42786735 - 42786691
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    |||||||||||||||||||||||| |||||| | | |||||||||    
T  42786735 ttatgagaaatgatatttgtacaaccattttcttacaatttttgt 42786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 159
Target Start/End: Original strand, 44068719 - 44068747
Alignment:
Q  131 gagaaatgatatttgtacaatcattttat 159  Q
    |||||||||||||||||||||||||||||    
T  44068719 gagaaatgatatttgtacaatcattttat 44068747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 16368123 - 16368077
Alignment:
Q  126 attatgagaaatgatatttgtacaatcattttatgataatttttgta 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  16368123 attaagagaaatgatatttgtacaaccattttataataatttttgta 16368077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 21857642 - 21857602
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataattt 167  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  21857642 ttatgagaaatgatatttgtacaaccattttatgacaattt 21857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 29197721 - 29197768
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  29197721 tatgataaataatatttgtacaatcattttgtgataatttttggacaa 29197768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 7636499 - 7636461
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  7636499 gagaaatgatatttgtacaatcattttataataactttt 7636461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 11635617 - 11635655
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  11635617 gagaaatgatatttgtacaacaattttatgataattttt 11635655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 16337141 - 16337103
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  16337141 gagaaatgatatttgtacaatcactttatgacaattttt 16337103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 25995441 - 25995487
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  25995441 tgagaaatgatatttgtacaaccattttgtggcaatttttgtacaac 25995487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 26094904 - 26094950
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  26094904 tgagaaatgatatttgtacaaccattttgtggcaatttttgtacaac 26094950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Complemental strand, 26396546 - 26396508
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  26396546 gagaaatgatatttgtacaattattttataataattttt 26396508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 736890 - 736853
Alignment:
Q  132 agaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||  |||||||||||||||||    
T  736890 agaaatgatatttgtacaactattttatgataattttt 736853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 2822222 - 2822259
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  2822222 gagaaatgatatttgtacaaccattttataataatttt 2822259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 3339570 - 3339525
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| |||||| ||| || |||||||||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaacttttgtacaac 3339525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 12500101 - 12500060
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  12500101 tatgagaaatgatatttgcacaatcattttgtgacaattttt 12500060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 12507430 - 12507389
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  12507430 tatgagaaatgatatttgcacaatcattttgtgacaattttt 12507389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 12508800 - 12508841
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||| ||||||||||| ||| |||||||    
T  12508800 tatgagaaatgatatttgcacaatcattttgtgacaattttt 12508841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 17417306 - 17417261
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||||||||||||| | ||| |||||||| |||||    
T  17417306 gagaaatgatatttgtacaatcattatgtgacaatttttggacaac 17417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 28670526 - 28670563
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttt 168  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  28670526 gagaaatgatatttgtacaaccattttatgatattttt 28670563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 2242093 - 2242053
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||| ||||||||||| ||| |||||||||    
T  2242093 gagaaatgatatttgaacaatcattttttgacaatttttgt 2242053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 16743339 - 16743299
Alignment:
Q  129 atgagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||||| |||||| | |||||||||    
T  16743339 atgagaaatgatatttgtacaaccattttttaataattttt 16743299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 32746302 - 32746254
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    |||||||||||||||||||| ||||| |||   ||||||||||||||||    
T  32746302 tatgagaaatgatatttgtataatcaatttgatataatttttgtacaac 32746254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 18594 - 18695
Alignment:
Q  130 tgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatctctc 229  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||       |||||| ||| |||||| | | || |||||||||||||  ||||||    
T  18594 tgagaaatgatatttgtacaaccaatttgtgataacttttgtacaactttctctctcatactcacatgatggtcttattctctctcttcctttttctctc 18693  T
Q  230 tc 231  Q
    ||    
T  18694 tc 18695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 9773 - 9816
Alignment:
Q  128 tatgagaaatgatatttgtacaatcattttatgataatttttgt 171  Q
    ||||||||||||||||||||||| |||||| | |||||||||||    
T  9773 tatgagaaatgatatttgtacaaccatttttttataatttttgt 9816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 147331 - 147227
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaacnnnnnnnctcatattcatatgatgttttcatcctctctcttccttcatct 226  Q
    |||||||||||||||| |||||||| | ||| ||| || |||||||||||       |||||| |||||||||| | | ||| ||||||||||||  |||    
T  147331 ttatgagaaatgatatctgtacaattaatttgtgacaacttttgtacaactttctctctcatactcatatgatggtcttatcgtctctcttcctttttct 147232  T
Q  227 ctctc 231  Q
    |||||    
T  147231 ctctc 147227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 4315 - 4353
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataattttt 169  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  4315 gagaaatgatatttgtacaaccattttatgataactttt 4353  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 249213 - 249168
Alignment:
Q  131 gagaaatgatatttgtacaatcattttatgataatttttgtacaac 176  Q
    ||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  249213 gagaaatgatatttgcacaatcaatttgtgataacttttgtacaac 249168  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 1920 - 1872
Alignment:
Q  127 ttatgagaaatgatatttgtacaatcattttatgataatttttgtacaa 175  Q
    |||||||||||||||||||||||| ||||||   |||| ||||||||||    
T  1920 ttatgagaaatgatatttgtacaaccatttttgtataacttttgtacaa 1872  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 3991 - 3955
Alignment:
Q  134 aaatgatatttgtacaatcattttatgataatttttg 170  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  3991 aaatgatatttatacaatcattttgtgataatttttg 3955  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 35571 - 35543
Alignment:
Q  129 atgagaaatgatatttgtacaatcatttt 157  Q
    |||||||||||||||||||||||||||||    
T  35571 atgagaaatgatatttgtacaatcatttt 35543  T

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