View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10923_low_35 (Length: 351)
Name: NF10923_low_35
Description: NF10923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10923_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 332
Target Start/End: Original strand, 45440442 - 45440773
Alignment:
| Q |
1 |
cgctacactatgcaacaaagctttgcatcaatggaagccaaacatatgcaaaacgcctggtaaccagtcaaaggatatctgcagattgacagaggaaatg |
100 |
Q |
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| T |
45440442 |
cgctacactatgcaacaaagctttgcatcaatggaagccaaacatatgcaaaacgcctggtaaccagtcaaaggatatctgcagattgacagaggaaatg |
45440541 |
T |
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| Q |
101 |
gtactagctatgaaaccccgcatcgtcaaaaaacattaaggtcaataaaacaagaaaattttgaattgatacctgtagtccataacaaaattagattttc |
200 |
Q |
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| T |
45440542 |
gtactagctatgaaaccccgcatcctcaaaaaacattaaggtcaataaaacaagaaaattttgaattgatacctgtagtccataacaaaattagattttc |
45440641 |
T |
|
| Q |
201 |
ctaccctccctagctgcaggattgtctgcttcccattctcctaatcatagcaaacacaaataagctaagtagagaacataactaactgcgttattataac |
300 |
Q |
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| T |
45440642 |
ctaccctccctagctgcaggattgtctgcttcccattctcctaatcatagcaaacacaaatcagctaagtagacaacataactaactgcgttattataac |
45440741 |
T |
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| Q |
301 |
ataaaaaacactcccggcttcaatgatgatac |
332 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
45440742 |
ataaaaaacactcccggcttcaatgatgatac |
45440773 |
T |
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