View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10925_low_14 (Length: 348)

Name: NF10925_low_14
Description: NF10925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10925_low_14
NF10925_low_14
[»] chr4 (34 HSPs)
chr4 (55-333)||(41038762-41039048)
chr4 (118-262)||(51480695-51480834)
chr4 (125-210)||(42158742-42158827)
chr4 (167-261)||(52440608-52440702)
chr4 (174-266)||(31742661-31742753)
chr4 (134-220)||(52440497-52440583)
chr4 (134-261)||(23236483-23236609)
chr4 (118-204)||(7741084-7741170)
chr4 (120-204)||(42158927-42159011)
chr4 (168-210)||(51480597-51480639)
chr4 (125-210)||(29172439-29172524)
chr4 (122-210)||(43098169-43098257)
chr4 (183-266)||(26709522-26709605)
chr4 (180-219)||(42158829-42158868)
chr4 (118-200)||(40363805-40363887)
chr4 (180-214)||(51480639-51480673)
chr4 (125-198)||(7741309-7741382)
chr4 (173-210)||(28704830-28704867)
chr4 (175-220)||(29823613-29823658)
chr4 (125-201)||(14028837-14028912)
chr4 (125-197)||(34408168-34408240)
chr4 (173-256)||(8306129-8306211)
chr4 (125-204)||(29172240-29172318)
chr4 (170-216)||(34408302-34408349)
chr4 (203-262)||(40363678-40363737)
chr4 (140-261)||(51891854-51891971)
chr4 (228-261)||(29172320-29172353)
chr4 (118-159)||(37462224-37462265)
chr4 (287-328)||(42158848-42158889)
chr4 (287-328)||(51480658-51480699)
chr4 (285-333)||(7741208-7741256)
chr4 (180-220)||(7741230-7741270)
chr4 (170-210)||(14336669-14336709)
chr4 (180-220)||(40363754-40363794)
[»] chr3 (21 HSPs)
chr3 (124-261)||(27007894-27008031)
chr3 (125-220)||(27007783-27007878)
chr3 (133-210)||(36961277-36961354)
chr3 (125-204)||(34072978-34073057)
chr3 (125-207)||(49559286-49559370)
chr3 (181-261)||(31143031-31143111)
chr3 (121-204)||(49559492-49559575)
chr3 (125-197)||(27094943-27095015)
chr3 (180-220)||(34073062-34073102)
chr3 (180-220)||(49559400-49559440)
chr3 (125-203)||(36961068-36961144)
chr3 (282-328)||(27007857-27007903)
chr3 (125-218)||(54418764-54418857)
chr3 (182-218)||(30807360-30807396)
chr3 (167-209)||(10682695-10682737)
chr3 (125-183)||(34702369-34702427)
chr3 (132-197)||(41995248-41995311)
chr3 (287-328)||(49559419-49559460)
chr3 (171-211)||(13712077-13712117)
chr3 (180-220)||(36961204-36961244)
chr3 (180-220)||(53518633-53518673)
[»] chr1 (29 HSPs)
chr1 (124-261)||(52293893-52294030)
chr1 (119-204)||(5522043-5522128)
chr1 (125-220)||(52293771-52293866)
chr1 (118-210)||(32505537-32505629)
chr1 (125-204)||(32360716-32360795)
chr1 (134-220)||(40239073-40239158)
chr1 (125-210)||(5739733-5739818)
chr1 (180-220)||(5521943-5521983)
chr1 (140-219)||(14518487-14518564)
chr1 (132-210)||(5521834-5521913)
chr1 (135-262)||(14518582-14518708)
chr1 (170-221)||(26507001-26507053)
chr1 (123-183)||(28055744-28055804)
chr1 (285-328)||(5521962-5522005)
chr1 (174-261)||(26516046-26516133)
chr1 (128-215)||(30673389-30673476)
chr1 (173-220)||(33610393-33610440)
chr1 (140-210)||(45111134-45111204)
chr1 (124-181)||(30673308-30673365)
chr1 (125-207)||(26506926-26507009)
chr1 (142-216)||(40238946-40239021)
chr1 (180-210)||(5521913-5521943)
chr1 (228-261)||(5522008-5522041)
chr1 (193-266)||(5739607-5739680)
chr1 (125-182)||(33720006-33720063)
chr1 (287-328)||(52293845-52293886)
chr1 (287-327)||(14518545-14518585)
chr1 (292-328)||(44970204-44970240)
chr1 (164-220)||(44970219-44970274)
[»] chr8 (28 HSPs)
chr8 (125-261)||(17707812-17707948)
chr8 (125-256)||(9840002-9840133)
chr8 (132-254)||(24550925-24551047)
chr8 (132-254)||(24546175-24546297)
chr8 (116-220)||(44996717-44996821)
chr8 (166-265)||(31873703-31873798)
chr8 (180-256)||(6911859-6911935)
chr8 (109-220)||(35615956-35616068)
chr8 (180-254)||(24549930-24550004)
chr8 (126-204)||(27111029-27111107)
chr8 (143-203)||(2230652-2230712)
chr8 (186-260)||(16338682-16338756)
chr8 (180-220)||(6911956-6911996)
chr8 (116-211)||(34686895-34686990)
chr8 (143-220)||(16338579-16338656)
chr8 (134-183)||(24543191-24543240)
chr8 (134-204)||(29362100-29362171)
chr8 (121-210)||(36314705-36314794)
chr8 (285-325)||(17707950-17707990)
chr8 (125-197)||(29362330-29362402)
chr8 (285-328)||(9577175-9577218)
chr8 (287-330)||(31873791-31873834)
chr8 (125-210)||(5888545-5888631)
chr8 (114-183)||(9577065-9577134)
chr8 (228-261)||(24476610-24476643)
chr8 (169-220)||(2230605-2230657)
chr8 (180-220)||(36275566-36275606)
chr8 (138-210)||(39700887-39700959)
[»] chr5 (52 HSPs)
chr5 (125-261)||(321962-322100)
chr5 (132-261)||(34444911-34445040)
chr5 (134-217)||(321851-321934)
chr5 (134-220)||(34445120-34445206)
chr5 (125-261)||(23251648-23251782)
chr5 (119-217)||(11539158-11539256)
chr5 (119-216)||(11495004-11495101)
chr5 (125-217)||(11562640-11562732)
chr5 (119-261)||(11502061-11502204)
chr5 (119-261)||(11509457-11509600)
chr5 (119-261)||(11516830-11516973)
chr5 (119-261)||(11524232-11524375)
chr5 (119-261)||(11531643-11531786)
chr5 (122-201)||(42460416-42460495)
chr5 (183-265)||(34222267-34222348)
chr5 (142-204)||(34222321-34222383)
chr5 (132-197)||(11494814-11494879)
chr5 (183-256)||(15408523-15408596)
chr5 (140-208)||(11501925-11501993)
chr5 (140-208)||(11509321-11509389)
chr5 (140-208)||(11516694-11516762)
chr5 (140-208)||(11524096-11524164)
chr5 (140-208)||(11531507-11531575)
chr5 (140-208)||(11538977-11539045)
chr5 (282-328)||(321916-321963)
chr5 (124-215)||(7743429-7743520)
chr5 (173-260)||(42460321-42460406)
chr5 (178-220)||(11539046-11539088)
chr5 (132-220)||(7119134-7119223)
chr5 (166-211)||(20729032-20729077)
chr5 (175-258)||(2061675-2061758)
chr5 (180-220)||(11494893-11494933)
chr5 (140-208)||(11562459-11562527)
chr5 (169-220)||(12875607-12875659)
chr5 (120-220)||(14023379-14023479)
chr5 (205-260)||(7119248-7119303)
chr5 (288-327)||(11494913-11494952)
chr5 (181-220)||(34445056-34445095)
chr5 (178-220)||(11501994-11502036)
chr5 (178-220)||(11509390-11509432)
chr5 (178-220)||(11516763-11516805)
chr5 (178-220)||(11524165-11524207)
chr5 (178-220)||(11531576-11531618)
chr5 (288-325)||(11502018-11502055)
chr5 (288-325)||(11509414-11509451)
chr5 (288-325)||(11516787-11516824)
chr5 (288-325)||(11524189-11524226)
chr5 (288-325)||(11531600-11531637)
chr5 (120-197)||(27705510-27705586)
chr5 (287-328)||(34445100-34445141)
chr5 (180-220)||(11562530-11562570)
chr5 (288-324)||(11562553-11562589)
[»] chr2 (21 HSPs)
chr2 (180-262)||(10673887-10673969)
chr2 (124-210)||(10673800-10673886)
chr2 (134-255)||(26294379-26294500)
chr2 (139-266)||(41695157-41695283)
chr2 (142-218)||(33613493-33613570)
chr2 (125-220)||(9709279-9709374)
chr2 (125-197)||(16103217-16103289)
chr2 (126-259)||(33613731-33613862)
chr2 (132-220)||(18467501-18467589)
chr2 (203-256)||(44364129-44364182)
chr2 (180-220)||(41695105-41695145)
chr2 (181-256)||(38768873-38768948)
chr2 (285-324)||(41695128-41695167)
chr2 (114-204)||(15006292-15006382)
chr2 (180-225)||(13565007-13565052)
chr2 (175-220)||(19193696-19193741)
chr2 (134-207)||(26294231-26294304)
chr2 (133-210)||(27893610-27893687)
chr2 (170-210)||(4603520-4603560)
chr2 (287-327)||(33613683-33613723)
chr2 (170-210)||(33615843-33615883)
[»] chr7 (18 HSPs)
chr7 (119-261)||(21594479-21594621)
chr7 (119-261)||(48771316-48771453)
chr7 (125-204)||(44933575-44933654)
chr7 (140-204)||(18880487-18880551)
chr7 (118-261)||(38831679-38831823)
chr7 (127-198)||(35340903-35340974)
chr7 (153-217)||(31070296-31070360)
chr7 (124-204)||(1461382-1461464)
chr7 (140-210)||(30463276-30463346)
chr7 (135-208)||(41516802-41516875)
chr7 (180-220)||(1461282-1461322)
chr7 (132-206)||(1816066-1816140)
chr7 (125-183)||(23164209-23164267)
chr7 (171-220)||(10201733-10201782)
chr7 (114-210)||(31893525-31893621)
chr7 (180-220)||(18880388-18880428)
chr7 (180-220)||(38223257-38223297)
chr7 (180-220)||(38831848-38831887)
[»] chr6 (9 HSPs)
chr6 (117-261)||(9032073-9032220)
chr6 (125-201)||(13754609-13754685)
chr6 (147-207)||(10482925-10482985)
chr6 (126-216)||(6366171-6366259)
chr6 (203-256)||(22053744-22053797)
chr6 (122-207)||(3848928-3849014)
chr6 (166-215)||(10482558-10482608)
chr6 (180-220)||(9032003-9032043)
chr6 (180-220)||(32670252-32670292)
[»] scaffold0280 (1 HSPs)
scaffold0280 (142-213)||(7679-7751)
[»] scaffold0340 (1 HSPs)
scaffold0340 (147-216)||(6280-6348)


Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 55 - 333
Target Start/End: Complemental strand, 41039048 - 41038762
Alignment:
Q  55 gaaaagtgttagggcggaggataagtgcgcggtggggaagaattaatcgagtagtattcaaaattaggtcaaatacatcttttggtcctttaagtttgac 154  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41039048 gaaaagtgttagggcggaggagaagtgcgcggtggggaagaattaatcgaatagtattcaaaattaggtcaaatacatcttttggttctttaagtttgac 41038949  T
Q  155 aaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaac 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41038948 aaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaac 41038849  T
Q  255 tta--------aaaaacttccttgttnnnnnnnngaacttaaaaacttcaaataagtgcattgaattaacaacttaaaggacttaat 333  Q
    |||        |||||||||||||||        ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41038848 ttaaaaacttaaaaaacttccttgttaaaaaaaagaatttaaaaacttcaaataagtgcattgaattaacaacttaaaggacttaat 41038762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 51480834 - 51480695
Alignment:
Q  118 ttaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatt 217  Q
    ||||| ||||||||||||| ||||| |||| ||||||||||| |   | |||||     || |||||||| |||||||||||||||||| ||||||||||    
T  51480834 ttaggccaaatacatctttgggtccattaaatttgacaaaaataccggattagt-----aagttttttaaatttcaaataggtcctttatgttgttaatt 51480740  T
Q  218 taaaacattgttacccttttaaggacttatttgaaacttaaaaaa 262  Q
    ||| |||  ||||||||||||||||| ||||||||||||||||||    
T  51480739 taatacaccgttacccttttaaggacctatttgaaacttaaaaaa 51480695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 42158742 - 42158827
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||||||||||||||||||||||||| | |||  |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  42158742 aaatacatcttttggtcctttaagtttgacaaacatattgagttaatcctttaaaatttttaagtttcaaataagtcctttaagtt 42158827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 52440702 - 52440608
Alignment:
Q  167 ttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    |||||||||||| |||||||||||| |||||| || ||||| |||||||||||| ||| | ||| |||||||||||| |||||||||||||||||    
T  52440702 ttagtcctttaagttttttaagttttaaatagatcatttaatttgttaatttaatacactattatccttttaaggacctatttgaaacttaaaaa 52440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 31742753 - 31742661
Alignment:
Q  174 tttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaacttc 266  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||  ||  ||||||||  ||||||| ||||||||||||||||||||||    
T  31742753 tttaagttttttaagtttcaaataggttctttaatttgttaatttaatgcaccgttaccctcataaggacctatttgaaacttaaaaaacttc 31742661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 52440497 - 52440583
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||| ||||||| ||||||||||||| || | |||| | |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  52440497 tttttgtcctttcagtttgacaaaaatatcatgttaattctttaagttttttaagttttaaataggtcctttaagttgttaatttaa 52440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 23236483 - 23236609
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttaccc 233  Q
    |||||||||||||| ||||| ||||| ||| ||||| | |||||  |||| ||||||| ||||||||  |||| ||||||||||||| ||| | |||| |    
T  23236483 ttttggtcctttaaatttgataaaaatattgggttaattctttatgtttt-taagttttaaataggtgatttacgttgttaatttaatacactattactc 23236581  T
Q  234 ttttaaggacttatttgaaacttaaaaa 261  Q
    ||||||||||| ||||||||||| ||||    
T  23236582 ttttaaggactcatttgaaacttcaaaa 23236609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 7741084 - 7741170
Alignment:
Q  118 ttaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| | ||| |||||| ||||  |||||||||||||||||| ||||||    
T  7741084 ttaggtaaaatatatcttttagtcctttaagtttgacaaaaatactagattagtcttttatgttttttaagtttcaaataagtcctt 7741170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 42159011 - 42158927
Alignment:
Q  120 aggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    ||||||||||| ||||||  |||||||||||||||||||  ||  ||||| | |||||| |||||||||||| ||||||||||||    
T  42159011 aggtcaaatacctcttttaatcctttaagtttgacaaaagtatcgggttatttctttaagttttttaagtttaaaataggtcctt 42158927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 51480597 - 51480639
Alignment:
Q  168 tagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  51480597 tagtcctttaagttttttaagtttcaaataggtcctttaagtt 51480639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 29172524 - 29172439
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||| ||||| | |||||||||||||||||||| |   || |||| |||||| ||| |||||||||||||| ||||||||||||    
T  29172524 aaatacctctttggatcctttaagtttgacaaaaataccggggtagtactttaagtttgttaagtttcaaataagtcctttaagtt 29172439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 43098169 - 43098257
Alignment:
Q  122 gtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||||  ||||||||||||| ||||||||||||    || ||||||||||||| ||||  ||||||||| |||||||||| ||||    
T  43098169 gtcaaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtt 43098257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 26709522 - 26709605
Alignment:
Q  183 tttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaacttc 266  Q
    |||||||||||||||| || ||||||||| || |||||  ||  |||| || |||| |||| ||||||||||||||||||||||    
T  26709522 tttaagtttcaaatagatcgtttaagttgatattttaatgcaccgttatccctttagggacctatttgaaacttaaaaaacttc 26709605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 42158829 - 42158868
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaattta 219  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  42158829 tttttttagtttcaaataggtcctttaagttgttaattta 42158868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 40363887 - 40363805
Alignment:
Q  118 ttaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggt 200  Q
    ||||| ||||||| ||||||  || ||||||||||||||||| || | ||||| |||||||  ||||||||||| ||||||||    
T  40363887 ttaggacaaatacttcttttaatcatttaagtttgacaaaaatatcatgttagacctttaagatttttaagttttaaataggt 40363805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 51480639 - 51480673
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgtta 214  Q
    |||||||||||||||||||||||||||||||||||    
T  51480639 ttttttaagtttcaaataggtcctttaagttgtta 51480673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 7741382 - 7741309
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaatag 198  Q
    |||||||| ||||| || ||||| |||||||| || ||| ||||| ||||||||||||||||| ||| ||||||    
T  7741382 aaatacatattttgatcttttaaatttgacaataatattgggttaatcctttaaattttttaatttttaaatag 7741309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 28704830 - 28704867
Alignment:
Q  173 ctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28704830 ctttaaattttttaagttttaaataggtcctttaagtt 28704867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 29823613 - 29823658
Alignment:
Q  175 ttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||| |||||||||||||||||||||||||||| || |||||||||    
T  29823613 ttaagttttttaagtttcaaataggtcctttaaattattaatttaa 29823658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 14028912 - 14028837
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtc 201  Q
    |||||| ||||| |||| ||||||||||||||||| |||  ||||||| ||||| ||||| ||||||| ||||||||    
T  14028912 aaatacctctttcggtc-tttaagtttgacaaaaatattgagttagtcatttaagtttttaaagtttcgaataggtc 14028837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 34408168 - 34408240
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    |||||| ||||||||| |||||||||||||||||| |  || ||| | |||| | ||||||||||||||||||    
T  34408168 aaatacttcttttggttctttaagtttgacaaaaataccagattaattctttcagttttttaagtttcaaata 34408240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 8306129 - 8306211
Alignment:
Q  173 ctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaactt 256  Q
    |||||||  |||||||||||||| ||| | |||||||||||||||| | ||| | |||||||||||| ||| || |||||||||    
T  8306129 ctttaaaaattttaagtttcaaacaggccttttaagttgttaattttataca-tcttacccttttaaagacctaattgaaactt 8306211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 29172240 - 29172318
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||| ||||||||| |||||||||||||||||| ||  |||| || |||| || ||||||| ||||||| ||||||||    
T  29172240 aaatacctcttttggttctttaagtttgacaaaaatatccggtttgt-cttttaagtttttaattttcaaagaggtcctt 29172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 34408302 - 34408349
Alignment:
Q  170 gtcctttaaa-ttttttaagtttcaaataggtcctttaagttgttaat 216  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  34408302 gtcctttaaagttttttaagtttcaaataagtcatttaagttgttaat 34408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 40363678 - 40363737
Alignment:
Q  203 tttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaa 262  Q
    |||||||||||| ||||| |||| ||||||||||| ||||| ||||| ||| ||||||||    
T  40363678 tttaagttgttagtttaatacatcgttacccttttgaggacctatttaaaagttaaaaaa 40363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 51891971 - 51891854
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaa 239  Q
    |||||||| ||||||||||| |   ||||| | |||||| |||||||| ||| ||||||||  |||||||||   |||||| |||  |||| |||| |||    
T  51891971 tcctttaaatttgacaaaaatacccggttaattctttaagttttttaaatttgaaataggttatttaagttg---atttaatacaccgtta-ccttctaa 51891876  T
Q  240 ggacttatttgaaacttaaaaa 261  Q
    ||||||| ||||||||||||||    
T  51891875 ggacttacttgaaacttaaaaa 51891854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 29172320 - 29172353
Alignment:
Q  228 ttacccttttaaggacttatttgaaacttaaaaa 261  Q
    |||||||||||||||| |||||||||||||||||    
T  29172320 ttacccttttaaggacctatttgaaacttaaaaa 29172353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 37462265 - 37462224
Alignment:
Q  118 ttaggtcaaatacatcttttggtcctttaagtttgacaaaaa 159  Q
    ||||| |||||||||||||| ||| |||||||||||||||||    
T  37462265 ttaggccaaatacatcttttagtcatttaagtttgacaaaaa 37462224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 42158889 - 42158848
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||||||| ||||| | |||||||||||||||||||    
T  42158889 aaaaacttcaaatatgtgcactaaattaacaacttaaaggac 42158848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 51480699 - 51480658
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    ||||| |||||||| |||||||||| ||||||||||||||||    
T  51480699 aaaaatttcaaataggtgcattgaagtaacaacttaaaggac 51480658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 7741208 - 7741256
Alignment:
Q  285 ttaaaaacttcaaataagtgcattgaattaacaacttaaaggacttaat 333  Q
    |||||||||||||||| | ||||| ||||||| ||||||||||| ||||    
T  7741208 ttaaaaacttcaaataggagcattaaattaacgacttaaaggacctaat 7741256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 7741270 - 7741230
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||| || |||||||||||||| ||||||||||    
T  7741270 ttttttaagttttaattaggtcctttaagtcgttaatttaa 7741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 14336669 - 14336709
Alignment:
Q  170 gtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  14336669 gtcctttaagtttttaaagtttcagataggtcctttaagtt 14336709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 40363794 - 40363754
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||| ||||||||| |||||| |||||||||||    
T  40363794 ttttttaagttttaaataggtcatttaagatgttaatttaa 40363754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 27008031 - 27007894
Alignment:
Q  124 caaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaac 223  Q
    |||||||||||||||||||||||||||  ||||||| |   | ||||||||||||  ||||||||||||||| ||||||||| |||||||||||||| ||    
T  27008031 caaatacatcttttggtcctttaagttcaacaaaaataacggcttagtcctttaaggtttttaagtttcaaacaggtccttttagttgttaatttaatac 27007932  T
Q  224 attgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    | || ||| ||||||||||| |||||||||||||||||    
T  27007931 actgctactcttttaaggacctatttgaaacttaaaaa 27007894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 27007783 - 27007878
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||| ||||||||||||  ||||||| |   | |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27007783 aaatacatcttttagtcctttaagttcaacaaaaataccggcttagtcctttaagttttttaagtttcaaataggtcctttaagttgttaatttaa 27007878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 36961354 - 36961277
Alignment:
Q  133 cttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||| ||||||||||| ||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  36961354 cttttggtcttttaagtttgataaaaatattgggttagtcctttaaactttttaagttttaaataggtcctttaagtt 36961277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 34072978 - 34073057
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||| || ||| ||||||||||||||||||||| |  |||||||| |||||| |||||||||||||||||||||||||    
T  34072978 aaatacctccttttgtcctttaagtttgacaaaaataccaggttagtgctttaagttttttaagtttcaaataggtcctt 34073057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 49559286 - 49559370
Alignment:
Q  125 aaatacatcttttggtccttt-aagtttgacaaaaacattaggttagtcctttaaa-ttttttaagtttcaaataggtcctttaa 207  Q
    ||||||||||||||||||||| |||||||||||||| |   |||||||||||| || ||||||||||||| ||||||||||||||    
T  49559286 aaatacatcttttggtccttttaagtttgacaaaaataccgggttagtccttttaagttttttaagtttctaataggtcctttaa 49559370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 31143111 - 31143031
Alignment:
Q  181 tttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    ||||||| ||||||||  ||| ||||||||||||||||||   | ||||||||||||||| || |||||||||||||||||    
T  31143111 tttttaaatttcaaatcagtcttttaagttgttaatttaatgtactgttacccttttaagaacctatttgaaacttaaaaa 31143031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 49559575 - 49559492
Alignment:
Q  121 ggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||||||| |||||| ||||||| ||||||||||||  |  ||| ||||||||||  ||||| |||||||||||||||||||    
T  49559575 ggtcaaatacctcttttagtccttttagtttgacaaaagtaccagggtagtcctttaggtttttcaagtttcaaataggtcctt 49559492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 27094943 - 27095015
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    |||||| | |||||||||||||||| ||||||||| |    ||||||| ||||||||||||||||||||||||    
T  27094943 aaataccttttttggtcctttaagtatgacaaaaataacgtgttagtcatttaaattttttaagtttcaaata 27095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 34073062 - 34073102
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34073062 ttttttaagtttcaaataggtcatttaagttgttaatttaa 34073102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 49559400 - 49559440
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49559400 ttttttaagtttcaaataggtcctttaagtttttaatttaa 49559440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 36961068 - 36961144
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcct 203  Q
    ||||||||| ||| ||||||||||||||||||||| ||| | |||||||  ||| ||||| || |||||||||||||||    
T  36961068 aaatacatccttttgtcctttaagtttgacaaaaatattggattagtcc--taagtttttaaattttcaaataggtcct 36961144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 27007903 - 27007857
Alignment:
Q  282 aacttaaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  27007903 aacttaaaaacttcaaataggtgtattaaattaacaacttaaaggac 27007857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 54418764 - 54418857
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||||| |||||| ||||||||| |||||| |||| ||    ||| ||||||||  |||| ||||||||||||| || ||||||||||||||||    
T  54418764 aaatacctcttttagtcctttaaatttgaccaaaatatcgaattattcctttaagcttttgaagtttcaaatagatcatttaagttgttaattt 54418857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 30807396 - 30807360
Alignment:
Q  182 ttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30807396 ttttaagcttcaaataggtcctttaagttgttaattt 30807360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 10682695 - 10682737
Alignment:
Q  167 ttagtcctttaaattttttaagtttcaaataggtcctttaagt 209  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  10682695 ttagtcttttaaattttttaagtttcaaattggttctttaagt 10682737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 34702369 - 34702427
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatttt 183  Q
    ||||||||||||| || |||||||||| ||||||| || ||||||||| ||||| ||||    
T  34702369 aaatacatcttttagttctttaagtttaacaaaaatatcaggttagtcatttaagtttt 34702427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 41995311 - 41995248
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    |||||||||| ||||||||||||||||| |   |||||||||||||| |||| |||||||||||||    
T  41995311 tcttttggtc-tttaagtttgacaaaaatacc-ggttagtcctttaagttttctaagtttcaaata 41995248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 49559460 - 49559419
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||||||| ||||||| |||||| ||||||||||||    
T  49559460 aaaaacttcaaatatgtgcattaaattaaaaacttaaaggac 49559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 13712077 - 13712117
Alignment:
Q  171 tcctttaaattttttaagtttcaaataggtcctttaagttg 211  Q
    |||||||| ||| | ||||||||||||||||||||||||||    
T  13712077 tcctttaagtttctaaagtttcaaataggtcctttaagttg 13712117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 36961244 - 36961204
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| ||||| ||||||||| ||||||||||||||||||    
T  36961244 tttttttagttttaaataggtcatttaagttgttaatttaa 36961204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 53518633 - 53518673
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||| ||||||| |||||| |||||||||||||    
T  53518633 ttttttaagttttaaataggccctttatgttgttaatttaa 53518673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 52294030 - 52293893
Alignment:
Q  124 caaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaac 223  Q
    ||||||| |||||||||||||||| | ||||||||| |    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||  |    
T  52294030 caaatacctcttttggtcctttaaatctgacaaaaataccgtgttagtcctttaagttttttaagtttcaaatagatcctttaagttgttaatttaatgc 52293931  T
Q  224 attgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    || |||||||| |||||||| ||||||||| |||||||    
T  52293930 atcgttaccctcttaaggacctatttgaaatttaaaaa 52293893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 5522128 - 5522043
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||| |||||||||||||||||||||||||||||||||||  |  ||||||||||||||| |||||||||||||||||||||||||    
T  5522128 taggccaaatacatcttttggtcctttaagtttgacaaaactaccaggttagtcctttaagttttttaagtttcaaataggtcctt 5522043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 52293771 - 52293866
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| | |||| ||||||||| ||||||||||| |   |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  52293771 aaatacttattttcgtcctttaattttgacaaaaataccgggttagtcctttacgttttttaagtttcaaataggtcctttaagttgttaatttaa 52293866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 32505629 - 32505537
Alignment:
Q  118 ttaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||| |||||| | ||||| |||||||| |||||| |||| ||| |||||||||||||| ||||||||||||||||||||||  |||||||    
T  32505629 ttaggttaaatacttattttgctcctttaactttgacgaaaatattgggttagtcctttaagttttttaagtttcaaataggtctcttaagtt 32505537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 32360716 - 32360795
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||||| || | ||| ||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||| ||||||    
T  32360716 aaatacattttgttgtcgtttaagtttgacaaaaatattaagttagtcctttaaattttttaggttttaaataagtcctt 32360795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 40239158 - 40239073
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||||| |||||||||||||| || |||||  ||||| |||| ||||||||||||| ||  ||||||||||||||||||    
T  40239158 ttttggtcctttaaatttgacaaaaacatcagattagtt-tttaagttttgtaagtttcaaataagttttttaagttgttaatttaa 40239073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 5739818 - 5739733
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||| |||||||||| ||| ||||||||||||| ||| |||||||| | ||| |||||| ||||| ||||| ||||||||||||    
T  5739818 aaatacctcttttggtcattttagtttgacaaaaatattgggttagtcttctaagttttttgagttttaaatatgtcctttaagtt 5739733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 5521943 - 5521983
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5521943 ttttttaagtttcaaataggtcctttaagttgttaatttaa 5521983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 14518487 - 14518564
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattta 219  Q
    |||||||||||||||||| ||   |||||| || ||||| ||||||||||||||||||| |||||||| |||||||||||    
T  14518487 tcctttaagtttgacaaatacc--aggttaatcttttaagttttttaagtttcaaatagatcctttaatttgttaattta 14518564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 5521834 - 5521913
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcc-tttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||||||||||||||||||||||| | || ||||| || ||||| ||| |||||||||||||| || |||||||||    
T  5521834 tcttttggtcctttaagtttgacaaaaatactatgttagaccttttaagtttgttaagtttcaaataagttctttaagtt 5521913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 14518708 - 14518582
Alignment:
Q  135 tttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttaccct 234  Q
    ||||||| |||| |||||||||||| || || ||| | | |||| ||||||| |||||||||||||| ||||| ||||||||||||   |  |||| | |    
T  14518708 tttggtcgtttaggtttgacaaaaatatcagattaattcgttaattttttta-gtttcaaataggtcatttaaattgttaatttaatgtaccgttatctt 14518610  T
Q  235 tttaaggacttatttgaaacttaaaaaa 262  Q
    ||||| ||| ||||||||||||||||||    
T  14518609 tttaaagacctatttgaaacttaaaaaa 14518582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 26507001 - 26507053
Alignment:
Q  170 gtcctttaaatttt-ttaagtttcaaataggtcctttaagttgttaatttaaa 221  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  26507001 gtcctttaaatttttttaagtttcaaataggttttttaagttgttaatttaaa 26507053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 28055744 - 28055804
Alignment:
Q  123 tcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatttt 183  Q
    |||||||| ||||||||| |||||||||||||||||| |  ||||||||||||||| ||||    
T  28055744 tcaaatacctcttttggttctttaagtttgacaaaaataccaggttagtcctttaagtttt 28055804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 5522005 - 5521962
Alignment:
Q  285 ttaaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  5522005 ttaaaaacttcaaataagtgtattaaattaacaacttaaaggac 5521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 26516133 - 26516046
Alignment:
Q  174 tttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    ||||| ||||||||||| ||||| | |  |||||||||||||||||| |||  ||| ||||||||||||  || ||||||||||||||    
T  26516133 tttaagttttttaagttacaaattgatattttaagttgttaatttaatacaaggttgcccttttaaggatctaattgaaacttaaaaa 26516046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 30673476 - 30673389
Alignment:
Q  128 tacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaa 215  Q
    ||||||||||  || ||||||||||||||||| | |  |||||| |||||| ||| ||||||||||||||  || |||||||||||||    
T  30673476 tacatctttttctcttttaagtttgacaaaaatactgagttagttctttaagtttcttaagtttcaaataaatcatttaagttgttaa 30673389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 33610440 - 33610393
Alignment:
Q  173 ctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  33610440 ctttaagttttttaaatttcaaataggtcgtttaagttgttaatttaa 33610393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 45111134 - 45111204
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||||||||||||||| |  ||| |||| |||||| ||| |||||||||||||| || |||||||||    
T  45111134 tcctttaagtttgacaaaaatagcagggtagttctttaagtttgttaagtttcaaataagtgctttaagtt 45111204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 30673308 - 30673365
Alignment:
Q  124 caaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatt 181  Q
    |||||||||||| || |||||||||||||||||||| || | ||||||| ||||||||    
T  30673308 caaatacatcttctgatcctttaagtttgacaaaaatataaagttagtcttttaaatt 30673365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 26506926 - 26507009
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttt-taagtttcaaataggtcctttaa 207  Q
    |||||| | |||| ||| ||||||||||||||||| || | ||||||  ||||||||||| |||  ||||||||||||||||||    
T  26506926 aaatacttattttagtcttttaagtttgacaaaaatatcaagttagtaatttaaatttttctaaaattcaaataggtcctttaa 26507009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 40238946 - 40239021
Alignment:
Q  142 ctttaagtttgacaaaaac-attaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaat 216  Q
    ||||| ||||||||||||  || |||||| | |||||  |||||||||||| ||||||||| ||||||||||||||    
T  40238946 ctttatgtttgacaaaaaatatcaggttaatactttacgttttttaagttttaaataggtcatttaagttgttaat 40239021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 5521913 - 5521943
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||||||||||||||||||||||||||    
T  5521913 ttttttaagtttcaaataggtcctttaagtt 5521943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 5522041 - 5522008
Alignment:
Q  228 ttacccttttaaggacttatttgaaacttaaaaa 261  Q
    |||||||||||||||| |||||||||||||||||    
T  5522041 ttacccttttaaggacctatttgaaacttaaaaa 5522008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 5739607 - 5739680
Alignment:
Q  193 aaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaacttc 266  Q
    ||||||| | ||||| || ||||||||| |||   ||||| ||||||| | |||||||||||||||||||||||    
T  5739607 aaataggacatttaaatttttaatttaatacaccattacctttttaagaatttatttgaaacttaaaaaacttc 5739680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 33720063 - 33720006
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattt 182  Q
    |||||| ||||||||||||||||||| |||||||| || |  ||||| ||||||||||    
T  33720063 aaatacctcttttggtcctttaagttcgacaaaaatatcaaattagttctttaaattt 33720006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 52293886 - 52293845
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||||||| ||| ||| |||||||||||||||||||    
T  52293886 aaaaacttcaaataggtggattaaattaacaacttaaaggac 52293845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 14518585 - 14518545
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaagga 327  Q
    |||||||||||||||||||| | ||||||||| ||||||||    
T  14518585 aaaaacttcaaataagtgcaataaattaacaaattaaagga 14518545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 44970204 - 44970240
Alignment:
Q  292 cttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  44970204 cttcaaataagtgtattaaattaacaacttaaaggac 44970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 44970274 - 44970219
Alignment:
Q  164 aggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| |||||||| ||||| | |||||||| | ||||||||||||||||||||||    
T  44970274 aggttaatcctttaagttttt-atgtttcaaacatgtcctttaagttgttaatttaa 44970219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 17707812 - 17707948
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaaca 224  Q
    ||||||||||||  ||||||||||||||||||||| |  || |||||||||||||| ||||||||||||||||||| | |||||||||||||||||  ||    
T  17707812 aaatacatctttctgtcctttaagtttgacaaaaatacgagattagtcctttaaatgttttaagtttcaaataggttcattaagttgttaatttaatgca 17707911  T
Q  225 ttgttacccttttaaggacttatttgaaacttaaaaa 261  Q
     | ||| |||||||||||| ||||| ||| |||||||    
T  17707912 ctattatccttttaaggacctatttaaaatttaaaaa 17707948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 9840002 - 9840133
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaaca 224  Q
    |||||||| | |||||||||||||||||| ||||| |   | |||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||    
T  9840002 aaatacatttgttggtcctttaagtttgataaaaataccggattagtcctttaagttttttaagtttcaaatatgtcctttaagttgttaatttaataca 9840101  T
Q  225 ttgttacccttttaaggacttatttgaaactt 256  Q
      |||| |||||||| ||| ||||||||||||    
T  9840102 ccgttatccttttaaagacctatttgaaactt 9840133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 24551047 - 24550925
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttac 231  Q
    |||||||||||||||| ||||| ||||| |  || ||| |  ||||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||    
T  24551047 tcttttggtcctttaaatttgataaaaataccagattaattgtttaagttttttaagtttcaaataggtcctttaagttgttaatttaatgcattcttac 24550948  T
Q  232 ccttttaaggacttatttgaaac 254  Q
    | |||||||||| ||||||||||    
T  24550947 ctttttaaggacctatttgaaac 24550925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 24546297 - 24546175
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttac 231  Q
    |||||||||||||||| ||||| ||||| |  || ||| || ||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  24546297 tcttttggtcctttaaatttgataaaaataccagattaatcgtttaagttttttaagtttcaaatagatcctttaagttgttaatttaatgcattgttac 24546198  T
Q  232 ccttttaaggacttatttgaaac 254  Q
    | ||||| |||| | ||||||||    
T  24546197 ctttttatggacctttttgaaac 24546175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 44996717 - 44996821
Alignment:
Q  116 aattaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaa 215  Q
    |||||||  |||||||| |||||||||||||||||||||||||| ||  | |||||| |||| |||||| |||||||||||| ||| |||||||||||||    
T  44996717 aattaggcaaaatacatattttggtcctttaagtttgacaaaaatatcggattagtcatttacatttttaaagtttcaaatatgtcatttaagttgttaa 44996816  T
Q  216 tttaa 220  Q
    |||||    
T  44996817 tttaa 44996821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 265
Target Start/End: Original strand, 31873703 - 31873798
Alignment:
Q  166 gttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaactt 265  Q
    ||||||||||||| |||||||||||| ||||||||    ||||||||||||||||  ||||||||||||||| |   |||||||||||||||||||||||    
T  31873703 gttagtcctttaagttttttaagttttaaataggt----taagttgttaatttaatgcattgttaccctttttaaagcttatttgaaacttaaaaaactt 31873798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 6911859 - 6911935
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaactt 256  Q
    |||||||||||||||||| |||||||| |||||||||||||  ||  ||||||||||||||||| ||||||||||||    
T  6911859 ttttttaagtttcaaataagtcctttacgttgttaatttaatgcaccgttacccttttaaggacctatttgaaactt 6911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 35615956 - 35616068
Alignment:
Q  109 tattcaaaattaggtcaaatacatcttttg-gtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaa 207  Q
    ||||| |||||| |||||||| || ||||  ||||||| ||||||||||||| |||  |||||||||||||||||||||| ||| |||||  || |||||    
T  35615956 tattctaaattacgtcaaatatatttttttagtccttttagtttgacaaaaatattgtgttagtcctttaaattttttaaatttaaaatatatcatttaa 35616055  T
Q  208 gttgttaatttaa 220  Q
    |||||| ||||||    
T  35616056 gttgtttatttaa 35616068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 24550004 - 24549930
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaac 254  Q
    |||| |||||||||||||| |||||| | ||||||||||||  |||||||||| |||||||||| ||||||||||    
T  24550004 ttttgtaagtttcaaatagatccttttaattgttaatttaatgcattgttacctttttaaggacctatttgaaac 24549930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 27111107 - 27111029
Alignment:
Q  126 aatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    ||||| |||||||||| || |||||||||||||| ||||| ||| |||||||| |||||||||||| |||| |||||||    
T  27111107 aatacttcttttggtcattcaagtttgacaaaaatattagattaatcctttaagttttttaagttttaaattggtcctt 27111029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 2230712 - 2230652
Alignment:
Q  143 tttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcct 203  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||| |||||    
T  2230712 tttaagtttgataaaaatattaggttagtcctttaaatttttaaagttttaaataagtcct 2230652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 260
Target Start/End: Complemental strand, 16338756 - 16338682
Alignment:
Q  186 aagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaa 260  Q
    |||||||||||| ||||||||||||| ||||||||  || | |||||||||| || || ||||||||||||||||    
T  16338756 aagtttcaaataagtcctttaagttggtaatttaatgcacttttaccctttttagaacctatttgaaacttaaaa 16338682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 6911996 - 6911956
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  6911996 ttttttaagtttcaaataggtcctttaagttgttattttaa 6911956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 34686990 - 34686895
Alignment:
Q  116 aattaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttg 211  Q
    ||||||||||||||   ||| ||||||||| | ||||||| ||  || | ||||||||||||||||||  |||||| ||||||||||||| |||||    
T  34686990 aattaggtcaaatatcacttatggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttg 34686895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 16338579 - 16338656
Alignment:
Q  143 tttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||| ||||||| ||  ||||| | |||||| |||||||||||| |||||| |||||||| | ||||||||||    
T  16338579 tttaagttttacaaaaatatcgggttaattctttaagttttttaagttttaaatagatcctttaaatcgttaatttaa 16338656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 24543191 - 24543240
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatttt 183  Q
    ||||| || ||||||||||||||||| ||| |||||||||||||||||||    
T  24543191 ttttgatcttttaagtttgacaaaaatattgggttagtcctttaaatttt 24543240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 29362100 - 29362171
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacatta--ggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||||||||||||||||||||||| ||||  || ||||  ||||||||||| |||||||||||| ||||||    
T  29362100 ttttggtcctttaagtttgacaaaaa-attattggctagttgtttaaatttttaaagtttcaaataagtcctt 29362171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 36314794 - 36314705
Alignment:
Q  121 ggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||  ||||||||||||| ||||||||||||  || | ||||||| |||||||||   ||||||||| || ||||||| ||||    
T  36314794 ggtcaaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtt 36314705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 17707950 - 17707990
Alignment:
Q  285 ttaaaaacttcaaataagtgcattgaattaacaacttaaag 325  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  17707950 ttaaaaacttcaaataggtgcattaaattaacaacttaaag 17707990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 29362402 - 29362330
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    |||||| | ||||| || ||||||||| ||||||| | ||||||||||||| || |||||||||||| |||||    
T  29362402 aaatacttattttgatcatttaagttttacaaaaatactaggttagtccttcaagttttttaagttttaaata 29362330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 9577175 - 9577218
Alignment:
Q  285 ttaaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||||||||||||||||| | ||||||||||| |||||    
T  9577175 ttaaaaacttcaaataagtgcattaagttaacaacttataggac 9577218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 31873791 - 31873834
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaaggactt 330  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||    
T  31873791 aaaaactttaaataggtgcattgaattaacaatttaaaggactt 31873834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 5888545 - 5888631
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaac-attaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||| || || |||| |||||||||||||||||  || |  ||| |||||||| ||||||||||||||||||| || ||||||||    
T  5888545 aaatacctcattgggtcttttaagtttgacaaaaaatatcaaattaatcctttaagttttttaagtttcaaatagatcttttaagtt 5888631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 9577065 - 9577134
Alignment:
Q  114 aaaattaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatttt 183  Q
    |||| ||||| |||||| |||||| ||| ||||||||||||||||| ||  | |||||||||||| ||||    
T  9577065 aaaaataggtaaaatacctcttttagtcttttaagtttgacaaaaatatcggattagtcctttaagtttt 9577134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 24476610 - 24476643
Alignment:
Q  228 ttacccttttaaggacttatttgaaacttaaaaa 261  Q
    |||| |||||||||||||||||||||||||||||    
T  24476610 ttactcttttaaggacttatttgaaacttaaaaa 24476643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 2230657 - 2230605
Alignment:
Q  169 agtcctttaaat-tttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| ||||| ||||||||||| ||||| ||||||||| ||||||||||||    
T  2230657 agtcctataaatatttttaagttttaaatatgtcctttaaattgttaatttaa 2230605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 36275566 - 36275606
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||||||| || |||| |||||||||||||    
T  36275566 ttttttaagtttcaaatagatcgtttacgttgttaatttaa 36275606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 39700887 - 39700959
Alignment:
Q  138 ggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||| ||||||||||||   ||| ||||||||||||| ||||  ||||||||| || ||||||| ||||    
T  39700887 ggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtt 39700959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 322100 - 321962
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacatta---ggttagtcctttaaa-ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||||||||||||||||||||||||||  |||   | ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  322100 aaatacatcttttggtcctttaagtttgacaaaaa--ttaccggattagtccttaaaagttttttaagtttcaaataggtcctttaagttgttaatttaa 322003  T
Q  221 aacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
     |||  |||| | ||||| |||| |||||||| ||||||||    
T  322002 tacaccgttatctttttagggacctatttgaagcttaaaaa 321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 34444911 - 34445040
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttac 231  Q
    |||||||||||||||||||||||||||| ||  | |||||||||||| |||||||| ||| |||||| | ||||||||||||||||||  |||  ||| |    
T  34444911 tcttttggtcctttaagtttgacaaaaatatcggattagtcctttaagttttttaaattttaaatagattctttaagttgttaatttattacaccgttgc 34445010  T
Q  232 ccttttaaggacttatttgaaacttaaaaa 261  Q
    |||  ||||||| |||||||||||||||||    
T  34445011 cctcataaggacctatttgaaacttaaaaa 34445040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 321851 - 321934
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatt 217  Q
    |||||||||||||||||||| ||||| |   |||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  321851 ttttggtcctttaagtttgataaaaataccgggttagtcctttaagttttttaaatttcaaataggtcctttaagttgttaatt 321934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 34445206 - 34445120
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||| ||||||||||||||||| || || || |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  34445206 ttttgatcctttaagtttgacaagaatatcagattagtcctttaagttttttaagtttctaataggtcctttaagttgctaatttaa 34445120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 23251648 - 23251782
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaaca 224  Q
    |||||| || |||||||||||||||||||||||||  | ||||||||||||||| ||||||||||||||||||  | |||||||||  ||||||||  ||    
T  23251648 aaatacctcatttggtcctttaagtttgacaaaaatttcaggttagtcctttaacttttttaagtttcaaatacct-ctttaagtt-ataatttaatgca 23251745  T
Q  225 ttgttacccttttaaggacttatttgaaacttaaaaa 261  Q
      |||||||||||||| | ||||||||| ||| ||||    
T  23251746 ccgttacccttttaagaaattatttgaaccttgaaaa 23251782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 11539256 - 11539158
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatt 217  Q
    |||||||||||  |||||||||  ||||||||||||||||| ||  |||||||| ||||| |||||||||||| |||  |||||||||||||| |||||    
T  11539256 taggtcaaatatctcttttggtggtttaagtttgacaaaaatatagggttagtcatttaagttttttaagttttaaacgggtcctttaagttgctaatt 11539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 11495101 - 11495004
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaat 216  Q
    ||||||||||||||||||||||  ||||||||||| ||||| ||  |||||||| |||||  ||||||||||| |||  |||||||||||||| ||||    
T  11495101 taggtcaaatacatcttttggtggtttaagtttgataaaaatatagggttagtcgtttaagctttttaagttttaaacgggtcctttaagttgctaat 11495004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 11562732 - 11562640
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatt 217  Q
    |||||| |||||||||  ||||||||||||||||| ||  |||||||| ||||| |||||||||||| |||  |||||||||||||| |||||    
T  11562732 aaatacctcttttggtggtttaagtttgacaaaaatatagggttagtcatttaagttttttaagttttaaacgggtcctttaagttgctaatt 11562640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 11502204 - 11502061
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||||||||||  |||||||||  ||||||||||||||||| ||  |||| ||| ||||| |||||||||||| |||  |||||||||||||| |||||     
T  11502204 taggtcaaatatctcttttggtggtttaagtttgacaaaaatatagggttcgtcatttaagttttttaagttttaaacgggtcctttaagttgctaatta 11502105  T
Q  219 aaaacattgttacccttttaag-gacttatttgaaacttaaaaa 261  Q
    ||  |||  | ||||||| |||  || |||||||||||||||||    
T  11502104 aatgcatcatcaccctttcaagaaacctatttgaaacttaaaaa 11502061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 11509600 - 11509457
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||||||||||  |||||||||  ||||||||||||||||| ||  |||| ||| ||||| |||||||||||| |||  |||||||||||||| |||||     
T  11509600 taggtcaaatatctcttttggtggtttaagtttgacaaaaatatagggttcgtcatttaagttttttaagttttaaacgggtcctttaagttgctaatta 11509501  T
Q  219 aaaacattgttacccttttaag-gacttatttgaaacttaaaaa 261  Q
    ||  |||  | ||||||| |||  || |||||||||||||||||    
T  11509500 aatgcatcatcaccctttcaagaaacctatttgaaacttaaaaa 11509457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 11516973 - 11516830
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||||||||||  |||||||||  ||||||||||||||||| ||  |||| ||| ||||| |||||||||||| |||  |||||||||||||| |||||     
T  11516973 taggtcaaatatctcttttggtggtttaagtttgacaaaaatatagggttcgtcatttaagttttttaagttttaaacgggtcctttaagttgctaatta 11516874  T
Q  219 aaaacattgttacccttttaag-gacttatttgaaacttaaaaa 261  Q
    ||  |||  | ||||||| |||  || |||||||||||||||||    
T  11516873 aatgcatcatcaccctttcaagaaacctatttgaaacttaaaaa 11516830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 11524375 - 11524232
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||||||||||  |||||||||  ||||||||||||||||| ||  |||| ||| ||||| |||||||||||| |||  |||||||||||||| |||||     
T  11524375 taggtcaaatatctcttttggtggtttaagtttgacaaaaatatagggttcgtcatttaagttttttaagttttaaacgggtcctttaagttgctaatta 11524276  T
Q  219 aaaacattgttacccttttaag-gacttatttgaaacttaaaaa 261  Q
    ||  |||  | ||||||| |||  || |||||||||||||||||    
T  11524275 aatgcatcatcaccctttcaagaaacctatttgaaacttaaaaa 11524232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 261
Target Start/End: Complemental strand, 11531786 - 11531643
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||||||||||  |||||||||  ||||||||||||||||| ||  |||| ||| ||||| |||||||||||| |||  |||||||||||||| |||||     
T  11531786 taggtcaaatatctcttttggtggtttaagtttgacaaaaatatagggttcgtcatttaagttttttaagttttaaacgggtcctttaagttgctaatta 11531687  T
Q  219 aaaacattgttacccttttaag-gacttatttgaaacttaaaaa 261  Q
    ||  |||  | ||||||| |||  || |||||||||||||||||    
T  11531686 aatgcatcatcaccctttcaagaaacctatttgaaacttaaaaa 11531643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 42460495 - 42460416
Alignment:
Q  122 gtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtc 201  Q
    ||||||||| || || |||| ||||| ||||||||||| || | ||||||||||||||| |||||||||| |||||||||    
T  42460495 gtcaaatacgtccttcggtcgtttaaatttgacaaaaatataaagttagtcctttaaatattttaagttttaaataggtc 42460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 34222267 - 34222348
Alignment:
Q  183 tttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaactt 265  Q
    |||||||||||| || |||||| || |||||||||||  | | | |||||||||||||||| |||||||||||||||||||||    
T  34222267 tttaagtttcaattatgtcctt-aatttgttaatttattagactattacccttttaaggacctatttgaaacttaaaaaactt 34222348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 34222383 - 34222321
Alignment:
Q  142 ctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||||||||||||  | || || |||||||||||| |||||||||||||||||||||||||    
T  34222383 ctttaagtttgacaagcatatgagattagtcctttaagttttttaagtttcaaataggtcctt 34222321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 11494814 - 11494879
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    ||||||| |||||||||||||||||||| || | ||||||| | ||| ||||||||||||||||||    
T  11494814 tcttttgatcctttaagtttgacaaaaatatcaagttagtcttctaagttttttaagtttcaaata 11494879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 15408523 - 15408596
Alignment:
Q  183 tttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaactt 256  Q
    ||||||||| ||||| || ||||||||| | |||||||  |||||||| |||||| ||||||||||||||||||    
T  15408523 tttaagttttaaatatgttctttaagttatgaatttaatgcattgttatcctttttaggacttatttgaaactt 15408596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11501925 - 11501993
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| | ||| |||||||||||||||||| ||| ||||||    
T  11501925 tcctttaagtttgacaaaaatatgaagttagtcttctaagttttttaagtttcaaataagtcatttaag 11501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11509321 - 11509389
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| | ||| |||||||||||||||||| ||| ||||||    
T  11509321 tcctttaagtttgacaaaaatatgaagttagtcttctaagttttttaagtttcaaataagtcatttaag 11509389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11516694 - 11516762
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| | ||| |||||||||||||||||| ||| ||||||    
T  11516694 tcctttaagtttgacaaaaatatgaagttagtcttctaagttttttaagtttcaaataagtcatttaag 11516762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11524096 - 11524164
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| | ||| |||||||||||||||||| ||| ||||||    
T  11524096 tcctttaagtttgacaaaaatatgaagttagtcttctaagttttttaagtttcaaataagtcatttaag 11524164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11531507 - 11531575
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| | ||| |||||||||||||||||| ||| ||||||    
T  11531507 tcctttaagtttgacaaaaatatgaagttagtcttctaagttttttaagtttcaaataagtcatttaag 11531575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11538977 - 11539045
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| | ||| |||||||||||||||||| ||| ||||||    
T  11538977 tcctttaagtttgacaaaaatatgaagttagtcttctaagttttttaagtttcaaataagtcatttaag 11539045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 321963 - 321916
Alignment:
Q  282 aacttaaaaa-cttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  321963 aacttaaaaagcttcaaataggtgcattgaattaacaacttaaaggac 321916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 7743520 - 7743429
Alignment:
Q  124 caaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaa 215  Q
    ||||||||| ||||| ||||||||  |||||||||| || ||| ||||| ||||  ||||||||||||||||||  |  |||||||||||||    
T  7743520 caaatacattttttgatcctttaaagttgacaaaaatatcaggatagtcatttaggttttttaagtttcaaataaattatttaagttgttaa 7743429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 260
Target Start/End: Original strand, 42460321 - 42460406
Alignment:
Q  173 ctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaa 260  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||| |||| ||   ||||||| |||||| || ||||||||||||||||    
T  42460321 ctttaaattttttaaattttaaataggtcgtttaagttgttaa-ttaatacgcagttaccc-tttaagaacctatttgaaacttaaaa 42460406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 11539046 - 11539088
Alignment:
Q  178 aattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  11539046 aatttttttagtttcaaatagatcctttaagttgttaatttaa 11539088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 7119134 - 7119223
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattt-tttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||| || ||||||||||||||||| ||  | ||| || ||||| ||| ||| ||||| ||||||||| ||||||||||||||||||    
T  7119134 tcttttgatcatttaagtttgacaaaaatatcggattaatcttttaagtttatttgagttttaaataggtcatttaagttgttaatttaa 7119223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 20729077 - 20729032
Alignment:
Q  166 gttagtcctttaaattttttaagtttcaaataggtcctttaagttg 211  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||    
T  20729077 gttagtcctttaaattttaaaagtttcaaataggtccttttagttg 20729032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 2061758 - 2061675
Alignment:
Q  175 ttaaattttttaagtttcaaataggtcct-ttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaa 258  Q
    ||||||||||||| ||| |||||| || | ||| ||||||||||||| ||||  ||||||||||||| || ||||||||||||||    
T  2061758 ttaaattttttaaattttaaatag-tcttcttacgttgttaatttaatacatcattacccttttaagaacatatttgaaacttaa 2061675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 11494893 - 11494933
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  11494893 tttttttagtttcaaatagatcctttaagttgttaatttaa 11494933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 11562459 - 11562527
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    |||||||||||||||||||| || | ||||||| |  || |||||||||||||||||| ||| ||||||    
T  11562459 tcctttaagtttgacaaaaatatgaagttagtcttccaagttttttaagtttcaaataagtcatttaag 11562527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 12875607 - 12875659
Alignment:
Q  169 agtcctttaaattttt-taagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||    
T  12875607 agtcctttaattttttctaagtttcaaatatgtcatttaagttgttaatttaa 12875659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 14023479 - 14023379
Alignment:
Q  120 aggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattta 219  Q
    |||| |||||| | |||||||| ||||||||||| ||||| || |   ||||| ||||| |||||||| ||| |||||| || |||||||| ||||||||    
T  14023479 aggttaaataccttttttggtcatttaagtttgataaaaatatcaaactagtcttttaagttttttaaattttaaatagatcttttaagttattaattta 14023380  T
Q  220 a 220  Q
    |    
T  14023379 a 14023379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 7119303 - 7119248
Alignment:
Q  205 taagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaa 260  Q
    ||||||||||||||||   | |||||||||||||||||| ||||||||| ||||||    
T  7119303 taagttgttaatttaatgtaatgttacccttttaaggacctatttgaaatttaaaa 7119248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 11494952 - 11494913
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaagga 327  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  11494952 aaaacttcaaataggtgcattaaattaacaacttaaagga 11494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 34445095 - 34445056
Alignment:
Q  181 tttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  34445095 tttttaagtttcaaataggtcttttaaattgttaatttaa 34445056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 11501994 - 11502036
Alignment:
Q  178 aattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  11501994 aatttttttagtttcaaatagatgctttaagttgttaatttaa 11502036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 11509390 - 11509432
Alignment:
Q  178 aattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  11509390 aatttttttagtttcaaatagatgctttaagttgttaatttaa 11509432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 11516763 - 11516805
Alignment:
Q  178 aattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  11516763 aatttttttagtttcaaatagatgctttaagttgttaatttaa 11516805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 11524165 - 11524207
Alignment:
Q  178 aattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  11524165 aatttttttagtttcaaatagatgctttaagttgttaatttaa 11524207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 11531576 - 11531618
Alignment:
Q  178 aattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||| |||||||||||| | |||||||||||||||||||    
T  11531576 aatttttttagtttcaaatagatgctttaagttgttaatttaa 11531618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 11502055 - 11502018
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaag 325  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11502055 aaaacttcaaataggtgcattaaattaacaacttaaag 11502018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 11509451 - 11509414
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaag 325  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11509451 aaaacttcaaataggtgcattaaattaacaacttaaag 11509414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 11516824 - 11516787
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaag 325  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11516824 aaaacttcaaataggtgcattaaattaacaacttaaag 11516787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 11524226 - 11524189
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaag 325  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11524226 aaaacttcaaataggtgcattaaattaacaacttaaag 11524189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 11531637 - 11531600
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaag 325  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11531637 aaaacttcaaataggtgcattaaattaacaacttaaag 11531600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 27705586 - 27705510
Alignment:
Q  120 aggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    ||||||||||| |||||||||| ||||||||| | ||||| || ||||||||  ||| || ||||||||||| |||||    
T  27705586 aggtcaaatacctcttttggtcatttaagtttaataaaaatatcaggttagt-attttaagtttttaagttttaaata 27705510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 34445100 - 34445141
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaaggac 328  Q
    |||||||||||||| ||||||| ||||| |||||||||||||    
T  34445100 aaaaacttcaaatatgtgcattaaattagcaacttaaaggac 34445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 11562530 - 11562570
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| |||||||||||| || ||||||||||||||||||    
T  11562530 tttttttagtttcaaatagatcatttaagttgttaatttaa 11562570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 11562589 - 11562553
Alignment:
Q  288 aaaacttcaaataagtgcattgaattaacaacttaaa 324  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  11562589 aaaacttcaaataggtgcattaaattaacaacttaaa 11562553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 10673969 - 10673887
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaacttaaaaaa 262  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||    
T  10673969 ttttttaagtttcaaataggtccgttaagttgttaatttaatacgccgttacccttttaaggacctatttgaaacttaaaaaa 10673887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 10673800 - 10673886
Alignment:
Q  124 caaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||  ||||| ||||||||||||||||||||| | ||||| | |||||||| |||||||||||||||||||||||||||||||    
T  10673800 caaatactacttttagtcctttaagtttgacaaaaatactaggtcaatcctttaagttttttaagtttcaaataggtcctttaagtt 10673886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 26294500 - 26294379
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttaccc 233  Q
    |||||| | ||||||||||||||||| |||  | || |||| ||| |||||||||||| ||||||||| ||| |||||||||||||| | ||||| ||||    
T  26294500 ttttggacttttaagtttgacaaaaatattgtgataatcctgtaagttttttaagttttaaataggtcttttgagttgttaatttaatatattgtcaccc 26294401  T
Q  234 ttttaaggacttatttgaaact 255  Q
    ||||||| || ||||| |||||    
T  26294400 ttttaagcacctatttaaaact 26294379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 41695283 - 41695157
Alignment:
Q  139 gtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttaccctttta 238  Q
    ||||||||||||||||||||| | |   ||| | |||| || |||||||||||||||||||||||||| ||||||||||||  |||  ||||||||||||    
T  41695283 gtcctttaagtttgacaaaaatactgaattaattcttt-aagtttttaagtttcaaataggtcctttaggttgttaatttattacaccgttaccctttta 41695185  T
Q  239 aggacttatttgaaacttaaaaaacttc 266  Q
       || |||||||||||| |||||||||    
T  41695184 ttaacctatttgaaactttaaaaacttc 41695157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 33613493 - 33613570
Alignment:
Q  142 ctttaagtttgacaaaaacattaggttagtcctttaaatttttt-aagtttcaaataggtcctttaagttgttaattt 218  Q
    ||||||||||||||||||||| | | ||||||||||| |||||| ||| ||||||||| |||||||||||||||||||    
T  33613493 ctttaagtttgacaaaaacatcaagctagtcctttaagtttttttaagcttcaaatagatcctttaagttgttaattt 33613570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 220
Target Start/End: Original strand, 9709279 - 9709374
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||| ||| ||||| ||||||||||| || |  ||| || |||||||||||||| |||||||||  | |||||||||||||||||||    
T  9709279 aaatacatcttttagtcatttaaatttgacaaaaatatcaaattaatcttttaaattttttaaatttcaaataaattctttaagttgttaatttaa 9709374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 16103217 - 16103289
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaata 197  Q
    |||||||||||||| || ||||||||||||||||  ||  |||||||| ||||| ||||||||||||||||||    
T  16103217 aaatacatcttttgatcttttaagtttgacaaaagtatcgggttagtcttttaagttttttaagtttcaaata 16103289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 259
Target Start/End: Complemental strand, 33613862 - 33613731
Alignment:
Q  126 aatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaaaacat 225  Q
    |||| ||||||||||| |||||| | |||||||| ||||| |||||  | ||  ||||||||||||||  |||   |||||| |||||||||||| ||||    
T  33613862 aatatatcttttggtcttttaagctagacaaaaatattagattagttttgtatgttttttaagtttca--tagactctttaaattgttaatttaatacat 33613765  T
Q  226 tgttacccttttaaggacttatttgaaacttaaa 259  Q
    | |||| ||||||| ||| ||||| |||||||||    
T  33613764 tattactcttttaatgacctatttaaaacttaaa 33613731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 18467501 - 18467589
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||| ||| |||||||| |||||||| |    ||||||||||| ||||| ||||||||||||||| |  ||||||||||||||||||    
T  18467501 tcttttagtcttttaagttcgacaaaaataccgagttagtccttttaatttattaagtttcaaatagataatttaagttgttaatttaa 18467589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 44364182 - 44364129
Alignment:
Q  203 tttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaactt 256  Q
    ||||||||||| ||||||  || |||||||||||||||||||||||| ||||||    
T  44364182 tttaagttgtttatttaatgcactgttacccttttaaggacttatttaaaactt 44364129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 41695105 - 41695145
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  41695105 ttttttaagttttaaataggtcatttaagttgttaatttaa 41695145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 256
Target Start/End: Complemental strand, 38768948 - 38768873
Alignment:
Q  181 tttttaagtttcaaataggtcctttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaactt 256  Q
    |||||||||||||||||| |  ||||||||||||||||||   ||||||||| |||||| ||  ||||| ||||||    
T  38768948 tttttaagtttcaaatagatattttaagttgttaatttaatggattgttacctttttaaagatctatttaaaactt 38768873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 41695167 - 41695128
Alignment:
Q  285 ttaaaaacttcaaataagtgcattgaattaacaacttaaa 324  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  41695167 ttaaaaacttcaaataggtgcattaaattaacaacttaaa 41695128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 15006292 - 15006382
Alignment:
Q  114 aaaattaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    ||||| ||||||||||  |||||| || |||||| ||| ||||||  || |  |||||| |||||| ||||||||||| ||||||||||||    
T  15006292 aaaataaggtcaaatatctcttttagtactttaaattttacaaaagtatcaaattagtcatttaaaatttttaagttttaaataggtcctt 15006382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 13565052 - 13565007
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaaaacat 225  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||    
T  13565052 ttttctaagtttcaaataggtcatttaaattgttaatttaatacat 13565007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 19193741 - 19193696
Alignment:
Q  175 ttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||| |||||||||||||||||| ||| |||||||| |||||||||    
T  19193741 ttaagttttttaagtttcaaatatgtcttttaagtttttaatttaa 19193696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 26294231 - 26294304
Alignment:
Q  134 ttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaa 207  Q
    |||| ||||||||| ||||| ||||| |||   ||| |||||||  ||||||||||||||||||| ||||||||    
T  26294231 tttttgtcctttaaatttgataaaaatattgaattaatcctttatgttttttaagtttcaaatagatcctttaa 26294304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 27893687 - 27893610
Alignment:
Q  133 cttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||||| ||||||||||||   | | ||||||||||||| |||  |||||||||| ||||| |||| ||||    
T  27893687 cttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtt 27893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 4603520 - 4603560
Alignment:
Q  170 gtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  4603520 gtcctttaaatttttaaggtttcagataggtcctttaagtt 4603560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 33613723 - 33613683
Alignment:
Q  287 aaaaacttcaaataagtgcattgaattaacaacttaaagga 327  Q
    |||||||||||||| ||| ||| ||||||||||||||||||    
T  33613723 aaaaacttcaaataggtgtattaaattaacaacttaaagga 33613683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 33615843 - 33615883
Alignment:
Q  170 gtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||||||||||||| | |||||| ||||||||||||||||    
T  33615843 gtcctttaaatttttaaggtttcatataggtcctttaagtt 33615883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 261
Target Start/End: Original strand, 21594479 - 21594621
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    ||||| ||||| || ||||| |||||||||||||||||||| |||   |||||||||||| |||||||| ||| ||||| ||| ||||||||||||||||    
T  21594479 taggttaaatatattttttgatcctttaagtttgacaaaaatattgtattagtcctttaagttttttaaattttaaatatgtcatttaagttgttaattt 21594578  T
Q  219 aaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
     |  || | ||||| |||||||||| ||||||| || ||||||    
T  21594579 gatgcactcttaccattttaaggacctatttgatacataaaaa 21594621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 261
Target Start/End: Original strand, 48771316 - 48771453
Alignment:
Q  119 taggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaattt 218  Q
    |||| ||||||| |||||||||  |||||||||||||||| ||   ||||||||    || || ||||||||||||| | |||||| ||||| |||||||    
T  48771316 taggccaaatacctcttttggtt-tttaagtttgacaaaatcaccgggttagtc----aagttgtttaagtttcaaacatgtccttcaagtttttaattt 48771410  T
Q  219 aaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    ||  ||  |||||||||||||||||||||||||||||||||||    
T  48771411 aatgcaccgttacccttttaaggacttatttgaaacttaaaaa 48771453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 44933654 - 44933575
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||| ||||||| |||||||| ||||||||||| ||  | ||| ||||||||||||||||||||||||||||||||||    
T  44933654 aaatacctcttttgatcctttaaatttgacaaaaatatcggattaatcctttaaattttttaagtttcaaataggtcctt 44933575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 18880551 - 18880487
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctt 204  Q
    |||||||||||||||||||| |  | ||||||||||||| |||||||||||||||||| ||||||    
T  18880551 tcctttaagtttgacaaaaataccatgttagtcctttaagttttttaagtttcaaatatgtcctt 18880487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 38831679 - 38831823
Alignment:
Q  118 ttaggtcaaatacatcttttggtcctttaagtttgacaaaaacattag-gttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaat 216  Q
    ||||| ||||||  ||| ||| || ||| ||||||||||||| ||  | |||||| |||||| ||||| || ||| ||| || || ||||||||||||||    
T  38831679 ttaggccaaatatctctcttgatcattttagtttgacaaaaaaatctgagttagtactttaagtttttaaaattttaaacagatcatttaagttgttaat 38831778  T
Q  217 ttaaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
    ||||  |||||||| ||||||||||| || |||||| ||||||||    
T  38831779 ttaatgcattgttatccttttaaggatttgtttgaagcttaaaaa 38831823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 35340903 - 35340974
Alignment:
Q  127 atacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaatag 198  Q
    ||||||||||||||||||||||||||||||| | |   |||||||| ||| | |||||||||||||||||||    
T  35340903 atacatcttttggtcctttaagtttgacaaacataccgggttagtcgtttgagttttttaagtttcaaatag 35340974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 31070360 - 31070296
Alignment:
Q  153 acaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaatt 217  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||||    |||||||||||||    
T  31070360 acaaaaatatcaggttagtcctttaagttttttaagtttcaaataggtttgctaagttgttaatt 31070296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 1461464 - 1461382
Alignment:
Q  124 caaatacatcttttggtcctttaagtttgacaaaaacattaggtta--gtcctttaaattttttaagtttcaaataggtcctt 204  Q
    ||||||| |||||||||  ||||||||||| | ||| |||||||||  |||||| || ||||||| |||||||||||||||||    
T  1461464 caaatacctcttttggttatttaagtttgatagaaatattaggttatagtccttgaagttttttatgtttcaaataggtcctt 1461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 30463276 - 30463346
Alignment:
Q  140 tcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    |||||||| ||||||||||| || |  ||| ||||||||||||||||||||| ||||| ||| ||||||||    
T  30463276 tcctttaaatttgacaaaaatatcaaattaatcctttaaattttttaagttttaaatatgtcatttaagtt 30463346  T

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Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 41516875 - 41516802
Alignment:
Q  135 tttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaag 208  Q
    ||||||||||||||||||||||||| |    |||| | |||||| ||||||||| |||||||||||| ||||||    
T  41516875 tttggtcctttaagtttgacaaaaatacagagttactactttaacttttttaagattcaaataggtcatttaag 41516802  T

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Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 1461282 - 1461322
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  1461282 ttttttaagtttctaacaggtcctttaagttgttaatttaa 1461322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 1816066 - 1816140
Alignment:
Q  132 tcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtccttta 206  Q
    ||||||||||||||| |||| ||||||| ||    || |||||||||||||||||||||| ||||| || |||||    
T  1816066 tcttttggtcctttaggttttacaaaaatatggtatttgtcctttaaattttttaagtttgaaatatgttcttta 1816140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 23164209 - 23164267
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatttt 183  Q
    |||||| |||||||||||| |||||||||||||||| |   ||||||| ||||||||||    
T  23164209 aaatacttcttttggtcctctaagtttgacaaaaacgtcgagttagtcttttaaatttt 23164267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 10201733 - 10201782
Alignment:
Q  171 tcctttaaattttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||| ||| |||||||||||| |||| | |||||||||||||||||||||    
T  10201733 tcctctaagttttttaagttttaaattgatcctttaagttgttaatttaa 10201782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 31893621 - 31893525
Alignment:
Q  114 aaaattaggtcaaata-catcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagtt 210  Q
    ||||| |||||||||| ||| |||||||||||| ||||||||| ||    || ||||||||||||| ||||  ||||||||| |||||||||| ||||    
T  31893621 aaaataaggtcaaatatcat-ttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtt 31893525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 18880388 - 18880428
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  18880388 ttttttatgtttcaaatatgtcctttaaattgttaatttaa 18880428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 38223297 - 38223257
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||||||| || |||||||||||| |||||    
T  38223297 ttttttaagtttcaaatagatcttttaagttgttagtttaa 38223257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 38831887 - 38831848
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  38831887 ttttttaagtttcaaataggtac-ttaagttgttaatttaa 38831848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 261
Target Start/End: Complemental strand, 9032220 - 9032073
Alignment:
Q  117 attaggtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgtta-- 214  Q
    ||||| |||||||  |||||||||||||||||||||||||||| || |  |||   |||||| ||||||||||||||||||| || ||||| ||||||      
T  9032220 attagttcaaatatctcttttggtcctttaagtttgacaaaaatatcatattaactctttaagttttttaagtttcaaatagatcatttaaattgttaat 9032121  T
Q  215 -atttaaaacattgttacccttttaaggacttatttgaaacttaaaaa 261  Q
     ||||||  |||||||||| ||| || |  ||||||||||||||||||    
T  9032120 tatttaatgcattgttaccttttcaacgcgttatttgaaacttaaaaa 9032073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 13754609 - 13754685
Alignment:
Q  125 aaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtc 201  Q
    |||||||| |||| ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||  ||||||||    
T  13754609 aaatacatttttttgtcctttaagtttgataaaaatattggattagtcctttaaattttttaagttttcaataggtc 13754685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 10482985 - 10482925
Alignment:
Q  147 agtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaa 207  Q
    |||||||||||||||| |||||| | ||||||||||||||| ||| ||||||||| |||||    
T  10482985 agtttgacaaaaacatgaggttaattctttaaattttttaaattttaaataggtcatttaa 10482925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 6366171 - 6366259
Alignment:
Q  126 aatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaat 216  Q
    ||||||| ||||| || |||||||| |||||||  ||||||||| || ||||| |||||||| ||||||||||||| || |||||||||||    
T  6366171 aatacattttttgatcatttaagttcgacaaaat-attaggttaatc-tttaagttttttaaatttcaaataggtcattcaagttgttaat 6366259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 22053797 - 22053744
Alignment:
Q  203 tttaagttgttaatttaaaacattgttacccttttaaggacttatttgaaactt 256  Q
    ||||||||||| ||||||  || |||||||||||||||||||||||| ||||||    
T  22053797 tttaagttgtttatttaatgcactgttacccttttaaggacttatttaaaactt 22053744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 3849014 - 3848928
Alignment:
Q  122 gtcaaatacatcttttggtcctttaagtttgacaaaaacattaggttagtcctttaaatttttt-aagtttcaaataggtcctttaa 207  Q
    ||||||||| ||||||  | |||||||||||| ||||| | |||  | ||||| ||| |||||| ||||||||||||||||||||||    
T  3849014 gtcaaatacctcttttacttctttaagtttgataaaaatactagactcgtcctataatttttttgaagtttcaaataggtcctttaa 3848928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 10482558 - 10482608
Alignment:
Q  166 gttagtcctttaaatttt-ttaagtttcaaataggtcctttaagttgttaa 215  Q
    |||||||||||||||||| |||||||||||||  ||||||||| |||||||    
T  10482558 gttagtcctttaaatttttttaagtttcaaatgagtcctttaaattgttaa 10482608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 9032003 - 9032043
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    ||||||||||||||| |||||| ||||| ||||||||||||    
T  9032003 ttttttaagtttcaagtaggtcatttaacttgttaatttaa 9032043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 32670252 - 32670292
Alignment:
Q  180 ttttttaagtttcaaataggtcctttaagttgttaatttaa 220  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  32670252 ttttttaagtttcaaatagaacccttaagttgttaatttaa 32670292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 7751 - 7679
Alignment:
Q  142 ctttaagtttgacaaaaacattaggttagtccttt-aaattttttaagtttcaaataggtcctttaagttgtt 213  Q
    |||||||||||| ||||| ||||||||||| |||| ||||||||||||||| |||||| || |||||| ||||    
T  7751 ctttaagtttgataaaaatattaggttagttcttttaaattttttaagttttaaatagatcatttaaggtgtt 7679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 6348 - 6280
Alignment:
Q  147 agtttgacaaaaacattaggttagtcctttaaattttttaagtttcaaataggtcctttaagttgttaat 216  Q
    ||||||||||||| |   |||||||| |||||||||||||| ||| ||||||||| |||||||| |||||    
T  6348 agtttgacaaaaataccgggttagtc-tttaaattttttaaattttaaataggtcatttaagtttttaat 6280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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