View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10925_low_7 (Length: 470)
Name: NF10925_low_7
Description: NF10925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10925_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 1 - 460
Target Start/End: Original strand, 25873390 - 25873849
Alignment:
| Q |
1 |
tttctcctcataaaagttacaaagttatgttcgtatacaatgttagacggctaaaatccaaacttttatttagaaggcaagagaattcagtttgagaata |
100 |
Q |
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| T |
25873390 |
tttctcctcataaaagttacaaagttatgttcgtatataatgttagacggctaaaatccaaacttttatttagaaggcaagagaattcagcttgagaata |
25873489 |
T |
|
| Q |
101 |
ctcaatcatgtcaaaattaattttaatcttttaatataacttttctatttcatataatcaaacatgaattaacacttcaccccttgaccataaataaatg |
200 |
Q |
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| T |
25873490 |
ctcaaacatgtcaaaattaattttaatcttttaatataacttttctatttcatataatcaaacatgaattaacacttcaccccttgaccataaataaatg |
25873589 |
T |
|
| Q |
201 |
aaggaaaaacaagatgttggacttgaaaaaatgtcatacaaatttgtaaagggatatatagaaccaattgtggctcttgcaagttgcaactttccaagtg |
300 |
Q |
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| T |
25873590 |
aaggaaaaacaagatgttgggcttgaaaaaatgtcatacaaatttgtaaagggatatatagaaccaattgtggctcttgcaagttgcaactttccaagtg |
25873689 |
T |
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| Q |
301 |
ttaatatgggagtacatttcaattttgataatttcctgtttgacttgtgcgatggttcaacctggagaacctgaaccaatgcaattatattatagtattt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25873690 |
ttaatatgggagtacatttcaattttgataatttcctgtttgacttgtaccatggttcaacctggagaacctgaaccaatgcaattatattatagtattt |
25873789 |
T |
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| Q |
401 |
tgttacgttgggcttctaataattagaaaccataaaaaatgcttcaaatttccccctttg |
460 |
Q |
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| T |
25873790 |
tgtaacgttgggcttctaataattagaaaccataaaaaatgcttcaaatttccccctttg |
25873849 |
T |
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