View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10927_low_2 (Length: 566)

Name: NF10927_low_2
Description: NF10927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10927_low_2
NF10927_low_2
[»] chr5 (78 HSPs)
chr5 (215-554)||(14288100-14288443)
chr5 (14-185)||(24758972-24759138)
chr5 (14-186)||(4374769-4374939)
chr5 (14-186)||(26379204-26379374)
chr5 (14-186)||(24027775-24027942)
chr5 (14-218)||(3297708-3297907)
chr5 (14-186)||(2475189-2475356)
chr5 (14-186)||(16050689-16050856)
chr5 (14-186)||(31939749-31939917)
chr5 (16-186)||(31884580-31884745)
chr5 (15-183)||(42110679-42110843)
chr5 (14-186)||(5589382-5589549)
chr5 (14-184)||(27176393-27176559)
chr5 (16-186)||(665476-665642)
chr5 (14-184)||(42322866-42323031)
chr5 (14-96)||(6928360-6928442)
chr5 (32-184)||(25821231-25821377)
chr5 (14-185)||(32261632-32261797)
chr5 (14-186)||(29383642-29383810)
chr5 (15-185)||(2530075-2530242)
chr5 (18-212)||(15976476-15976666)
chr5 (28-186)||(43396524-43396680)
chr5 (15-186)||(10042782-10042954)
chr5 (15-186)||(29874584-29874750)
chr5 (14-186)||(36088567-36088736)
chr5 (15-185)||(3246819-3246985)
chr5 (15-186)||(19361641-19361805)
chr5 (15-96)||(39803853-39803934)
chr5 (24-185)||(28746235-28746390)
chr5 (20-183)||(36083790-36083948)
chr5 (24-96)||(40308340-40308412)
chr5 (15-96)||(789026-789108)
chr5 (24-186)||(8314829-8314987)
chr5 (15-89)||(40506809-40506884)
chr5 (28-185)||(42111726-42111877)
chr5 (15-184)||(42416790-42416955)
chr5 (16-186)||(789977-790142)
chr5 (24-183)||(7536645-7536800)
chr5 (14-94)||(28990940-28991021)
chr5 (24-96)||(19270905-19270977)
chr5 (15-90)||(31958390-31958465)
chr5 (24-96)||(37147067-37147139)
chr5 (16-184)||(30503448-30503613)
chr5 (16-184)||(30543791-30543956)
chr5 (140-186)||(14205524-14205570)
chr5 (424-554)||(14281149-14281279)
chr5 (18-186)||(39782952-39783116)
chr5 (25-96)||(1060706-1060776)
chr5 (29-96)||(14720185-14720252)
chr5 (15-96)||(29382576-29382659)
chr5 (140-186)||(30503673-30503719)
chr5 (140-186)||(30544016-30544062)
chr5 (41-94)||(15875753-15875806)
chr5 (41-96)||(2001506-2001561)
chr5 (26-96)||(3213231-3213300)
chr5 (34-96)||(16166292-16166354)
chr5 (140-185)||(16488044-16488089)
chr5 (140-185)||(31958299-31958344)
chr5 (35-96)||(35380505-35380566)
chr5 (140-184)||(788943-788987)
chr5 (24-96)||(18041185-18041256)
chr5 (41-96)||(36515058-36515113)
chr5 (24-67)||(37461872-37461914)
chr5 (142-185)||(40506719-40506762)
chr5 (140-186)||(3213148-3213194)
chr5 (14-67)||(28887174-28887228)
chr5 (34-96)||(43354523-43354584)
chr5 (140-177)||(15875673-15875710)
chr5 (149-186)||(28887299-28887336)
chr5 (149-186)||(36514975-36515012)
chr5 (44-96)||(14205433-14205485)
chr5 (29-84)||(28869358-28869413)
chr5 (20-66)||(2463637-2463683)
chr5 (20-82)||(36242319-36242381)
chr5 (149-186)||(14720303-14720340)
chr5 (55-96)||(30503759-30503800)
chr5 (55-96)||(30544102-30544143)
chr5 (44-96)||(33929003-33929055)
[»] chr6 (40 HSPs)
chr6 (14-212)||(18593499-18593692)
chr6 (14-186)||(3850217-3850384)
chr6 (14-186)||(559719-559886)
chr6 (14-186)||(32244369-32244535)
chr6 (14-186)||(20791538-20791705)
chr6 (14-185)||(28472213-28472380)
chr6 (14-183)||(33945738-33945905)
chr6 (15-214)||(7541098-7541291)
chr6 (14-96)||(24046560-24046642)
chr6 (15-185)||(6018490-6018656)
chr6 (24-186)||(34247671-34247827)
chr6 (24-186)||(17505488-17505645)
chr6 (15-185)||(29859401-29859569)
chr6 (24-91)||(6833553-6833620)
chr6 (24-96)||(5414562-5414634)
chr6 (24-96)||(34207003-34207075)
chr6 (24-91)||(10945711-10945778)
chr6 (40-186)||(19988908-19989048)
chr6 (24-96)||(24162794-24162866)
chr6 (24-96)||(29043209-29043281)
chr6 (23-96)||(3053915-3053987)
chr6 (24-96)||(173062-173134)
chr6 (29-96)||(8866970-8867037)
chr6 (24-95)||(18314008-18314078)
chr6 (140-186)||(34206927-34206973)
chr6 (140-184)||(10943067-10943111)
chr6 (140-186)||(172967-173013)
chr6 (140-186)||(24046478-24046524)
chr6 (24-67)||(247420-247462)
chr6 (24-67)||(12582487-12582529)
chr6 (140-179)||(29043319-29043358)
chr6 (34-96)||(28231075-28231136)
chr6 (25-67)||(29976317-29976359)
chr6 (140-186)||(29977738-29977784)
chr6 (140-181)||(5414482-5414523)
chr6 (140-184)||(10945820-10945864)
chr6 (149-183)||(24162914-24162948)
chr6 (24-77)||(33976004-33976056)
chr6 (149-186)||(33976119-33976156)
chr6 (52-96)||(8872681-8872725)
[»] chr4 (85 HSPs)
chr4 (14-186)||(7400123-7400291)
chr4 (14-186)||(13890909-13891078)
chr4 (14-186)||(53274619-53274787)
chr4 (14-186)||(55208400-55208570)
chr4 (14-186)||(7365787-7365954)
chr4 (14-186)||(1166630-1166796)
chr4 (14-186)||(1169112-1169278)
chr4 (14-186)||(11200824-11200992)
chr4 (14-186)||(17624651-17624821)
chr4 (14-186)||(26111369-26111539)
chr4 (14-186)||(27288389-27288556)
chr4 (14-186)||(55991810-55991979)
chr4 (14-186)||(32206509-32206678)
chr4 (14-186)||(40950936-40951103)
chr4 (15-214)||(28116721-28116924)
chr4 (14-183)||(34264550-34264714)
chr4 (14-186)||(55188161-55188328)
chr4 (14-96)||(10137883-10137965)
chr4 (14-96)||(6940178-6940260)
chr4 (15-186)||(8847929-8848097)
chr4 (14-183)||(11966923-11967086)
chr4 (14-186)||(36189974-36190141)
chr4 (15-186)||(17976438-17976604)
chr4 (15-184)||(23628826-23628990)
chr4 (14-96)||(29099625-29099707)
chr4 (15-96)||(18138327-18138408)
chr4 (16-185)||(24303720-24303884)
chr4 (24-96)||(26097651-26097723)
chr4 (14-96)||(32200716-32200799)
chr4 (15-185)||(37873560-37873728)
chr4 (24-96)||(11180909-11180981)
chr4 (24-186)||(39651736-39651889)
chr4 (24-96)||(41144305-41144377)
chr4 (24-96)||(43117519-43117591)
chr4 (24-186)||(46045716-46045867)
chr4 (24-185)||(28361410-28361565)
chr4 (15-96)||(20681186-20681268)
chr4 (34-186)||(32139419-32139573)
chr4 (15-96)||(49125536-49125618)
chr4 (16-96)||(40665513-40665593)
chr4 (24-96)||(22556965-22557037)
chr4 (24-96)||(40849729-40849801)
chr4 (23-186)||(8151202-8151359)
chr4 (24-186)||(346520-346679)
chr4 (16-96)||(24631102-24631181)
chr4 (24-91)||(8654320-8654386)
chr4 (18-65)||(34663865-34663912)
chr4 (141-186)||(45019181-45019226)
chr4 (38-91)||(51153499-51153552)
chr4 (109-186)||(34663936-34664012)
chr4 (15-89)||(51187608-51187683)
chr4 (140-186)||(32200633-32200679)
chr4 (16-65)||(45472468-45472518)
chr4 (140-186)||(52620733-52620779)
chr4 (36-96)||(25881932-25881992)
chr4 (28-96)||(30071346-30071414)
chr4 (141-185)||(34664934-34664978)
chr4 (141-184)||(18138452-18138495)
chr4 (141-184)||(49125663-49125706)
chr4 (15-65)||(52620629-52620680)
chr4 (141-186)||(10581901-10581946)
chr4 (44-96)||(40952041-40952093)
chr4 (24-67)||(10262027-10262069)
chr4 (24-67)||(21562386-21562428)
chr4 (24-67)||(24080098-24080140)
chr4 (24-67)||(43329907-43329949)
chr4 (14-49)||(45019226-45019261)
chr4 (22-96)||(9097470-9097543)
chr4 (141-186)||(20681304-20681348)
chr4 (35-96)||(29346227-29346287)
chr4 (35-96)||(35831991-35832051)
chr4 (141-186)||(44856696-44856741)
chr4 (24-67)||(26926968-26927010)
chr4 (140-179)||(43117629-43117668)
chr4 (24-67)||(51449973-51450015)
chr4 (141-186)||(8654230-8654276)
chr4 (140-186)||(9097387-9097433)
chr4 (140-186)||(24631018-24631064)
chr4 (140-186)||(41106052-41106098)
chr4 (23-72)||(18002494-18002543)
chr4 (41-82)||(41105971-41106012)
chr4 (140-184)||(18002441-18002484)
chr4 (34-94)||(26871609-26871668)
chr4 (140-172)||(30071452-30071484)
chr4 (140-184)||(40952131-40952175)
[»] scaffold0481 (2 HSPs)
scaffold0481 (16-186)||(7442-7610)
scaffold0481 (16-183)||(4431-4592)
[»] chr2 (47 HSPs)
chr2 (14-214)||(970946-971142)
chr2 (14-186)||(8878112-8878280)
chr2 (15-186)||(7274664-7274831)
chr2 (14-186)||(36085861-36086029)
chr2 (14-186)||(1835678-1835844)
chr2 (16-181)||(24926005-24926165)
chr2 (14-186)||(31972275-31972442)
chr2 (14-186)||(5166259-5166427)
chr2 (14-186)||(8683652-8683819)
chr2 (14-186)||(3324178-3324346)
chr2 (16-183)||(4631203-4631369)
chr2 (18-186)||(18166749-18166911)
chr2 (15-186)||(3243209-3243377)
chr2 (14-96)||(7233016-7233098)
chr2 (15-186)||(668206-668375)
chr2 (14-186)||(17032728-17032895)
chr2 (24-186)||(3079720-3079876)
chr2 (24-186)||(34912654-34912810)
chr2 (24-186)||(40202218-40202374)
chr2 (50-186)||(20313162-20313294)
chr2 (16-181)||(36078481-36078637)
chr2 (16-184)||(9799239-9799405)
chr2 (15-96)||(38879129-38879211)
chr2 (24-186)||(10120612-10120770)
chr2 (24-183)||(1117981-1118136)
chr2 (24-186)||(35423789-35423939)
chr2 (24-186)||(41452818-41452974)
chr2 (24-96)||(45474725-45474797)
chr2 (140-186)||(17051064-17051110)
chr2 (34-91)||(38709708-38709765)
chr2 (53-181)||(38959564-38959687)
chr2 (15-96)||(2180011-2180093)
chr2 (14-67)||(17051167-17051220)
chr2 (24-67)||(3708454-3708496)
chr2 (24-67)||(11868920-11868962)
chr2 (24-67)||(35360313-35360355)
chr2 (31-88)||(37522706-37522763)
chr2 (24-96)||(35287306-35287377)
chr2 (45-96)||(1692624-1692675)
chr2 (140-183)||(35287226-35287269)
chr2 (140-186)||(2180132-2180178)
chr2 (140-186)||(13549490-13549536)
chr2 (148-186)||(32292307-32292345)
chr2 (140-182)||(38879249-38879291)
chr2 (140-174)||(45474836-45474870)
chr2 (140-184)||(20641972-20642015)
chr2 (24-72)||(20642025-20642073)
[»] chr8 (80 HSPs)
chr8 (16-186)||(17313456-17313621)
chr8 (14-186)||(17045924-17046092)
chr8 (14-186)||(27467703-27467872)
chr8 (14-186)||(34805780-34805949)
chr8 (14-186)||(7219370-7219537)
chr8 (14-186)||(14718858-14719025)
chr8 (14-186)||(16239083-16239250)
chr8 (14-186)||(39685414-39685581)
chr8 (14-186)||(41360981-41361148)
chr8 (14-186)||(43817879-43818046)
chr8 (14-186)||(16845019-16845186)
chr8 (15-186)||(38139303-38139471)
chr8 (16-186)||(44602854-44603017)
chr8 (15-186)||(44908488-44908649)
chr8 (14-186)||(11924758-11924926)
chr8 (16-186)||(169620-169786)
chr8 (14-96)||(2184410-2184492)
chr8 (16-183)||(6816024-6816189)
chr8 (14-96)||(36216576-36216658)
chr8 (17-186)||(39485942-39486108)
chr8 (14-183)||(26518714-26518878)
chr8 (15-96)||(36059276-36059358)
chr8 (15-186)||(37034816-37034984)
chr8 (39-218)||(39997991-39998166)
chr8 (24-186)||(38137634-38137791)
chr8 (28-186)||(39525458-39525610)
chr8 (24-181)||(45138971-45139122)
chr8 (15-96)||(1877578-1877659)
chr8 (16-96)||(2190647-2190728)
chr8 (24-186)||(11579194-11579350)
chr8 (37-186)||(41526324-41526467)
chr8 (15-88)||(34997523-34997596)
chr8 (24-96)||(38909288-38909360)
chr8 (24-96)||(42844281-42844352)
chr8 (34-184)||(12261387-12261532)
chr8 (15-186)||(44655059-44655224)
chr8 (41-96)||(27914929-27914984)
chr8 (41-96)||(27961348-27961403)
chr8 (140-186)||(42844411-42844457)
chr8 (23-94)||(1922389-1922457)
chr8 (25-96)||(15310398-15310470)
chr8 (25-96)||(15490767-15490839)
chr8 (41-96)||(27748853-27748908)
chr8 (41-96)||(27877985-27878040)
chr8 (41-96)||(28018166-28018221)
chr8 (140-186)||(14449524-14449570)
chr8 (140-186)||(24511638-24511684)
chr8 (26-96)||(39201524-39201593)
chr8 (34-96)||(42984002-42984064)
chr8 (140-184)||(39140716-39140760)
chr8 (140-184)||(42984098-42984142)
chr8 (36-83)||(9275854-9275901)
chr8 (24-67)||(20665621-20665663)
chr8 (140-179)||(33848630-33848669)
chr8 (45-96)||(41904778-41904829)
chr8 (45-96)||(45296785-45296836)
chr8 (15-65)||(33848722-33848772)
chr8 (140-186)||(40048591-40048637)
chr8 (140-185)||(35916481-35916526)
chr8 (14-75)||(35916579-35916640)
chr8 (141-186)||(36059192-36059237)
chr8 (141-186)||(36216492-36216537)
chr8 (24-64)||(1921795-1921835)
chr8 (140-180)||(2184329-2184369)
chr8 (146-186)||(2190558-2190598)
chr8 (40-96)||(14449611-14449667)
chr8 (140-183)||(22947644-22947687)
chr8 (24-67)||(30550984-30551026)
chr8 (140-183)||(35004369-35004412)
chr8 (24-67)||(44215733-44215775)
chr8 (141-179)||(1877502-1877540)
chr8 (29-87)||(34325869-34325927)
chr8 (42-96)||(39140798-39140852)
chr8 (34-91)||(40048681-40048739)
chr8 (140-186)||(45296702-45296748)
chr8 (141-186)||(29868604-29868649)
chr8 (41-86)||(41903138-41903183)
chr8 (34-94)||(12251480-12251539)
chr8 (149-185)||(39201639-39201675)
chr8 (34-94)||(39443669-39443728)
[»] chr3 (83 HSPs)
chr3 (14-186)||(54510302-54510469)
chr3 (14-186)||(54741796-54741966)
chr3 (14-186)||(29500325-29500493)
chr3 (14-186)||(30268998-30269166)
chr3 (14-186)||(45599181-45599349)
chr3 (14-186)||(22346994-22347162)
chr3 (14-186)||(4018909-4019077)
chr3 (14-186)||(7040874-7041041)
chr3 (14-186)||(36592131-36592298)
chr3 (14-186)||(14587301-14587469)
chr3 (14-186)||(48545102-48545270)
chr3 (24-186)||(53022669-53022826)
chr3 (14-186)||(52674776-52674942)
chr3 (14-186)||(33932402-33932568)
chr3 (14-186)||(52461020-52461188)
chr3 (14-184)||(2909425-2909592)
chr3 (14-186)||(7265048-7265215)
chr3 (14-183)||(29450652-29450817)
chr3 (15-186)||(39721252-39721418)
chr3 (14-186)||(26881614-26881780)
chr3 (14-186)||(19536700-19536866)
chr3 (24-186)||(50739157-50739313)
chr3 (24-186)||(50773542-50773698)
chr3 (14-96)||(13450265-13450347)
chr3 (14-186)||(46757552-46757720)
chr3 (16-96)||(20849404-20849484)
chr3 (14-96)||(43316516-43316598)
chr3 (15-96)||(12101464-12101545)
chr3 (24-186)||(48961122-48961276)
chr3 (24-96)||(46090118-46090190)
chr3 (14-186)||(42187665-42187832)
chr3 (25-186)||(15496385-15496541)
chr3 (24-186)||(36987654-36987810)
chr3 (24-186)||(37013093-37013249)
chr3 (14-181)||(37413561-37413724)
chr3 (15-186)||(38361743-38361910)
chr3 (24-184)||(47719487-47719641)
chr3 (16-96)||(35690212-35690293)
chr3 (24-186)||(41990680-41990836)
chr3 (24-96)||(46850711-46850783)
chr3 (24-91)||(44762728-44762795)
chr3 (14-96)||(13337092-13337173)
chr3 (15-185)||(54203667-54203828)
chr3 (24-96)||(54113415-54113487)
chr3 (14-96)||(50933197-50933279)
chr3 (15-90)||(12996818-12996893)
chr3 (140-186)||(875880-875926)
chr3 (36-186)||(33899842-33899986)
chr3 (14-75)||(875826-875884)
chr3 (140-186)||(12101377-12101423)
chr3 (15-96)||(35906684-35906766)
chr3 (141-186)||(35529773-35529818)
chr3 (40-96)||(10617639-10617695)
chr3 (24-96)||(20996334-20996406)
chr3 (24-96)||(54835729-54835801)
chr3 (45-96)||(8238921-8238972)
chr3 (34-96)||(46088720-46088782)
chr3 (24-86)||(54195692-54195754)
chr3 (140-184)||(46850630-46850674)
chr3 (140-183)||(13450390-13450432)
chr3 (24-67)||(44075414-44075456)
chr3 (140-212)||(54113531-54113603)
chr3 (140-186)||(34433455-34433501)
chr3 (144-186)||(35690122-35690164)
chr3 (140-186)||(44541231-44541277)
chr3 (140-181)||(46090037-46090078)
chr3 (140-185)||(54795955-54796000)
chr3 (142-174)||(10617736-10617768)
chr3 (24-60)||(34433767-34433803)
chr3 (45-96)||(22762296-22762347)
chr3 (150-185)||(50933332-50933367)
chr3 (45-96)||(54796037-54796088)
chr3 (24-62)||(916278-916315)
chr3 (140-186)||(32754259-32754305)
chr3 (14-72)||(42617767-42617825)
chr3 (41-95)||(44541140-44541194)
chr3 (149-212)||(46088609-46088672)
chr3 (140-186)||(52464882-52464928)
chr3 (149-186)||(20849317-20849354)
chr3 (150-183)||(47670453-47670486)
chr3 (140-183)||(12996731-12996772)
chr3 (141-185)||(20996251-20996295)
chr3 (24-96)||(32754151-32754222)
[»] scaffold0197 (1 HSPs)
scaffold0197 (14-186)||(25700-25869)
[»] chr1 (70 HSPs)
chr1 (14-186)||(7833538-7833705)
chr1 (14-186)||(17585508-17585675)
chr1 (16-185)||(38802300-38802464)
chr1 (14-186)||(43120693-43120861)
chr1 (14-186)||(9574854-9575021)
chr1 (14-186)||(25659724-25659892)
chr1 (14-186)||(33373735-33373902)
chr1 (14-186)||(33895131-33895299)
chr1 (14-186)||(39326959-39327125)
chr1 (14-186)||(41901614-41901782)
chr1 (14-215)||(46587978-46588173)
chr1 (14-186)||(3265109-3265276)
chr1 (14-186)||(11583149-11583314)
chr1 (14-186)||(33642603-33642770)
chr1 (14-186)||(40432113-40432285)
chr1 (16-183)||(11754146-11754308)
chr1 (14-183)||(45104173-45104337)
chr1 (18-186)||(14487239-14487402)
chr1 (14-186)||(33894008-33894169)
chr1 (14-186)||(47037045-47037213)
chr1 (14-185)||(36165435-36165603)
chr1 (14-186)||(33831845-33832007)
chr1 (14-186)||(33818010-33818176)
chr1 (14-186)||(33877478-33877644)
chr1 (14-186)||(17249027-17249195)
chr1 (24-181)||(43123042-43123193)
chr1 (15-96)||(46040486-46040568)
chr1 (24-183)||(43119032-43119186)
chr1 (24-96)||(24473551-24473623)
chr1 (14-91)||(36952718-36952796)
chr1 (15-186)||(31638331-31638496)
chr1 (37-184)||(16097358-16097502)
chr1 (53-183)||(31215782-31215907)
chr1 (53-183)||(31221537-31221662)
chr1 (14-96)||(39879140-39879223)
chr1 (15-96)||(18091268-18091348)
chr1 (14-96)||(1322525-1322608)
chr1 (15-186)||(23730210-23730376)
chr1 (38-184)||(17366271-17366411)
chr1 (24-88)||(34652277-34652341)
chr1 (24-91)||(34078285-34078352)
chr1 (29-96)||(11606467-11606534)
chr1 (38-186)||(39729120-39729262)
chr1 (140-183)||(33933029-33933072)
chr1 (141-184)||(36952630-36952673)
chr1 (24-96)||(7308331-7308404)
chr1 (140-184)||(44819821-44819865)
chr1 (140-184)||(45589729-45589773)
chr1 (45-96)||(28568754-28568805)
chr1 (16-91)||(33932911-33932985)
chr1 (141-184)||(34652388-34652431)
chr1 (24-87)||(43124356-43124419)
chr1 (140-183)||(46040405-46040448)
chr1 (140-186)||(16033008-16033054)
chr1 (140-186)||(39879056-39879102)
chr1 (45-94)||(17670009-17670058)
chr1 (140-181)||(40648494-40648535)
chr1 (36-96)||(44065442-44065502)
chr1 (34-94)||(49223163-49223222)
chr1 (140-186)||(49571314-49571357)
chr1 (140-183)||(12247685-12247728)
chr1 (45-96)||(23910914-23910965)
chr1 (147-186)||(34078401-34078440)
chr1 (140-186)||(28568671-28568717)
chr1 (140-186)||(36680039-36680085)
chr1 (140-174)||(43808845-43808879)
chr1 (149-186)||(17670106-17670143)
chr1 (140-185)||(18091391-18091436)
chr1 (140-184)||(5542119-5542163)
chr1 (150-186)||(49223271-49223307)
[»] scaffold0166 (1 HSPs)
scaffold0166 (14-185)||(1466-1632)
[»] chr7 (70 HSPs)
chr7 (14-179)||(27031149-27031311)
chr7 (18-186)||(12907906-12908069)
chr7 (14-186)||(29448631-29448799)
chr7 (14-186)||(38045648-38045815)
chr7 (14-186)||(40239811-40239979)
chr7 (14-215)||(40789170-40789366)
chr7 (14-184)||(18956216-18956380)
chr7 (14-186)||(10999103-10999271)
chr7 (14-185)||(32960712-32960878)
chr7 (16-186)||(37669184-37669349)
chr7 (16-186)||(43156185-43156349)
chr7 (14-212)||(17278145-17278340)
chr7 (14-186)||(41426954-41427120)
chr7 (14-183)||(23639333-23639497)
chr7 (14-186)||(1448091-1448258)
chr7 (14-91)||(45620640-45620717)
chr7 (14-185)||(4407957-4408118)
chr7 (24-186)||(41343235-41343392)
chr7 (14-186)||(4399981-4400148)
chr7 (15-186)||(4406541-4406709)
chr7 (24-96)||(20482280-20482352)
chr7 (16-85)||(4615384-4615454)
chr7 (23-96)||(44651882-44651955)
chr7 (15-96)||(47840722-47840803)
chr7 (16-96)||(6607088-6607169)
chr7 (15-96)||(21134356-21134436)
chr7 (40-186)||(40035944-40036083)
chr7 (24-96)||(36769226-36769298)
chr7 (24-184)||(4404295-4404447)
chr7 (24-181)||(4492356-4492506)
chr7 (24-184)||(5483406-5483562)
chr7 (24-96)||(5526108-5526177)
chr7 (15-73)||(20135099-20135158)
chr7 (140-186)||(16933401-16933447)
chr7 (140-186)||(16938784-16938830)
chr7 (27-96)||(3840021-3840090)
chr7 (109-183)||(20135005-20135077)
chr7 (24-65)||(43111035-43111076)
chr7 (109-186)||(43111100-43111175)
chr7 (20-184)||(23154632-23154789)
chr7 (140-186)||(36765688-36765734)
chr7 (140-186)||(44651793-44651839)
chr7 (24-67)||(19036360-19036402)
chr7 (24-67)||(20718234-20718276)
chr7 (24-67)||(29488481-29488523)
chr7 (24-67)||(33232655-33232697)
chr7 (24-67)||(34284797-34284839)
chr7 (45-96)||(42915378-42915429)
chr7 (16-65)||(16933500-16933550)
chr7 (16-65)||(16938883-16938933)
chr7 (141-183)||(37143542-37143584)
chr7 (140-186)||(38049152-38049198)
chr7 (34-96)||(38049237-38049299)
chr7 (140-186)||(42828799-42828845)
chr7 (141-186)||(4616173-4616218)
chr7 (150-183)||(5526226-5526259)
chr7 (35-96)||(17816601-17816661)
chr7 (35-96)||(19050340-19050400)
chr7 (147-184)||(36769344-36769381)
chr7 (149-181)||(3840137-3840169)
chr7 (40-96)||(36765592-36765648)
chr7 (149-180)||(20482404-20482435)
chr7 (24-67)||(20762915-20762957)
chr7 (140-186)||(15641229-15641275)
chr7 (14-44)||(19758160-19758190)
chr7 (140-186)||(47171750-47171796)
chr7 (20-96)||(42828881-42828956)
chr7 (140-180)||(42915466-42915506)
chr7 (34-94)||(42995355-42995414)
chr7 (140-180)||(47840841-47840881)
[»] scaffold0178 (1 HSPs)
scaffold0178 (24-186)||(7204-7364)
[»] scaffold0024 (2 HSPs)
scaffold0024 (16-186)||(90374-90542)
scaffold0024 (23-186)||(110442-110600)
[»] scaffold0198 (1 HSPs)
scaffold0198 (24-186)||(15174-15333)
[»] scaffold0244 (2 HSPs)
scaffold0244 (15-96)||(7574-7656)
scaffold0244 (149-183)||(7493-7527)
[»] scaffold0768 (1 HSPs)
scaffold0768 (24-91)||(6308-6375)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-185)||(132648-132817)
[»] scaffold0003 (2 HSPs)
scaffold0003 (41-96)||(229101-229156)
scaffold0003 (140-186)||(229195-229241)
[»] scaffold1793 (1 HSPs)
scaffold1793 (140-186)||(182-228)
[»] scaffold0318 (2 HSPs)
scaffold0318 (41-96)||(1072-1127)
scaffold0318 (149-222)||(1174-1247)
[»] scaffold0027 (2 HSPs)
scaffold0027 (24-91)||(138034-138101)
scaffold0027 (140-186)||(137944-137990)
[»] scaffold1822 (1 HSPs)
scaffold1822 (140-186)||(356-402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (36-96)||(5732-5793)
[»] scaffold0038 (1 HSPs)
scaffold0038 (34-96)||(31572-31633)
[»] scaffold0006 (1 HSPs)
scaffold0006 (24-96)||(156569-156640)
[»] scaffold0016 (1 HSPs)
scaffold0016 (140-186)||(99491-99537)
[»] scaffold0095 (2 HSPs)
scaffold0095 (34-94)||(236-295)
scaffold0095 (34-94)||(1726-1785)
[»] scaffold0088 (1 HSPs)
scaffold0088 (34-94)||(55399-55458)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-96)||(50244-50319)
scaffold0010 (20-96)||(57777-57852)


Alignment Details
Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 215 - 554
Target Start/End: Original strand, 14288100 - 14288443
Alignment:
Q  215 atatgtttgataattcaaaaatgttgatttaatacattgtttttaataatttggcaactgaaattaatcaaatgtgaaccaatctagagtgaaatagt-- 312  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||  |      
T  14288100 atatgtttgataattcaaacatgttgatttaatacattgtttttaataatttggcaactgaagttaatcaaatgtgaaccaatccagagtaaaatgtttt 14288199  T
Q  313 atatcagaatttgaaaaatctaccaccc--acacccacccactcagctaaacagacagcatagcatacagtgagtgcaggatgcgtagctccgactccga 410  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  14288200 atatcagaatttgaaaaatctaccacccccacacccactcactcagctaaacaaacagcatagcatacagtgagtacaggatgcgtagctccgactccga 14288299  T
Q  411 caccgacctcgggtggcccggccttaaactctcccgccctctcaccgactctgtcgccgacaccgacgatatagctcagccgctcttccgctttctcgcc 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14288300 caccgacctcgggtggcccggccttaaactctcccgccctctcaccgactctgtcgccgacaccgacgatatagctcagtcgctcttccgctttctcgcc 14288399  T
Q  511 aactacattgcaactaaaaccacttccctctctcaagtcgagat 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14288400 aactacattgcaactaaaaccacttccctctctcaagtcgagat 14288443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 24758972 - 24759138
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  24758972 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 24759068  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  24759069 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 24759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 4374939 - 4374769
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||            |||||    
T  4374939 agacaccaccaaaaaataataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaaaaataaag 4374840  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  4374839 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4374769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 26379204 - 26379374
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  26379204 agacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaacttaaaaaaaaaaataaag 26379303  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| |||||||    
T  26379304 aaaccaaacagctttagcc--tttttcttagagagctttattttaactttgttttaaagtagcttgtagaccg 26379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 24027942 - 24027775
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||            |||||    
T  24027942 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagagct---aaaaaaaaataaag 24027846  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  24027845 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 24027775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 3297907 - 3297708
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |            |||||    
T  3297907 agacaccaccaaaaaataataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaatt---acaaaaaaataaag 3297811  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtaccta 213  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||    
T  3297810 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtaccta 3297713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 2475356 - 2475189
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  2475356 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 2475260  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  2475259 aaaccaaatagctttagcc--tttttcttaaagaactttattttaactttgttttaaagtagtttttagaccg 2475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 16050856 - 16050689
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  16050856 agacaccaccaaaaaataataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 16050760  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16050759 aaaccaaacagctttagcc--tttttcttaaagaactttattttaactttgttttaaaatagcttttagaccg 16050689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 31939917 - 31939749
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||            |||||    
T  31939917 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 31939820  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  31939819 aaaccaaacaactttagcc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 31939749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 31884745 - 31884580
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  31884745 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 31884649  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||       |||| |||| |||||||||||||| ||||||||||||||||||||||    
T  31884648 accaaacagctttagcc--tttttcttatagagttttattttaactttattttaaagtagcttttagaccg 31884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 42110679 - 42110843
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            ||||||    
T  42110679 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact--aaaaaaaaaataaaga 42110776  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||||||||       |||||||| ||||||||||||||| |||||||||||||||||||    
T  42110777 aaccaaacagctttagcc--tttttcttaaagaactttattttaactttattttaaagtagcttttaga 42110843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 5589549 - 5589382
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||||    
T  5589549 agacaccaccaaaaaatgataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 5589452  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5589451 aaaccaaacagctttagcc--tttttcttaaagagcttta-tttaactttgttttaaagtagcttttagaccg 5589382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 27176559 - 27176393
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||            ||||    
T  27176559 agacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 27176463  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||| || |||||||||    
T  27176462 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaaataccttttagac 27176393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 665642 - 665476
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||            |||||||    
T  665642 acaccaccaaaaaataataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaa 665545  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||| |       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  665544 accaaacaactttagtc--tttttcttaaagagctttattttaaatttgttttaaagtagcttttagaccg 665476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 42322866 - 42323031
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||            |||||    
T  42322866 agacaccatcaaaaaataataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact---aaaaacaaataaag 42322962  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||||| ||||||||       || ||||||||||||||||||||||||||||||||||||||||||    
T  42322963 aaaccaaacaactttagcc--tttttctcaaagagctttattttaactttgttttaaagtagcttttagac 42323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 6928442 - 6928360
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6928442 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 25821231 - 25821377
Alignment:
Q  32 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagc 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||| |||||||    
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactttagc 25821326  T
Q  132 cnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |       |||||||||||||||||||||||||||||||||||||||||||||    
T  25821327 c--tttttcttaaagagctttattttaactttgttttaaagtagcttttagac 25821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 32261797 - 32261632
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||            |||||    
T  32261797 agacaccaccaaaaaataataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 32261701  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||||||  |||||||       || |||||||||||||||||||||||||||||||||||||||||||    
T  32261700 aaaccaaaca-atttagcc--tttttctgaaagagctttattttaactttgttttaaagtagcttttagacc 32261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 29383810 - 29383642
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| || ||||            ||||    
T  29383810 agacaccaccaaaaaaataataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaact---aaaaaaaaataaa 29383714  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29383713 gaaaccaaacaactttagcc--tttttcttaaagacctttattttaactttgttttaaagtagcttttagaccg 29383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 2530075 - 2530242
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  2530075 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--gaaaaaaaaataaag 2530172  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||||||  |||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  2530173 aaaccaaacaattttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagacc 2530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 15976476 - 15976666
Alignment:
Q  18 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaac 117  Q
    |||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||            |||||||||    
T  15976476 accaccaaaaaaaaaaagattcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact--aaaaaaaaaataaagaaac 15976573  T
Q  118 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 212  Q
    |||||||||||||||        |||||||||||||||||||||||||||||||||  |||||||||||       ||||| |||||||||||||    
T  15976574 caaacagctttagcctttttt--ttaaagagctttattttaactttgttttaaagtgacttttagaccgaaaaaaagtctggtcaaacggtacct 15976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 43396524 - 43396680
Alignment:
Q  28 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 127  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||             ||| ||||||||||||||    
T  43396524 aataataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaactaaagaaaaaaaaaaaaaaaaccaaacagctt 43396623  T
Q  128 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  43396624 tagc--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 43396680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 10042782 - 10042954
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac--tnnnnnnnnnnnntaa 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| | |||               |||    
T  10042782 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaacaaaaataaaataaaataa 10042881  T
Q  112 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  10042882 agaaaccaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 10042954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 29874750 - 29874584
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||            |||||    
T  29874750 gacaccaccaaaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaact----aaaaaaaataaag 29874655  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||        |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  29874654 aaaccaaacagctttagc--ttttttcttaaagaactttatttttactttgttttaaagtagcttttagaccg 29874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 36088567 - 36088736
Alignment:
Q  14 agacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||| || |            ||||    
T  36088567 agacaccaccaaaaaaataataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaaat---aaaaaaaaataaa 36088663  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||  ||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||    
T  36088664 gaaaccaaacgactttagcc-ttctttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 36088736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 3246819 - 3246985
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||            |||||    
T  3246819 gacaccaccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact---aaaaaaaaataaag 3246915  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||| |        ||||||||| ||||||||||||||||||||||||||||||||||||    
T  3246916 aaaccaaacagctttaac--tttttccttaaagagttttattttaactttgttttaaagtagcttttagacc 3246985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 19361641 - 19361805
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||| |||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            ||||||    
T  19361641 gacatcaccaaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaaga 19361736  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||        ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19361737 aaccaaacagctttagc--tttttccttaaagagctttattttaaccttgttttaaagtag-ttttagaccg 19361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 39803934 - 39803853
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  39803934 gacacaaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 28746390 - 28746235
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||| ||||||    
T  28746390 aaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaatcaaaca 28746295  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    | ||||  |       ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28746294 gtttta--cctttttccttaaagagctttattttaactttgttttaaagtaacttttagacc 28746235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 36083790 - 36083948
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaacca 119  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||            |||||||||||    
T  36083790 caccacaaaaaaaaaaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact---aaaaaaatataaagaaacca 36083886  T
Q  120 aacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||       ||||||| |||||||||||||||| ||||||||||| |||||||    
T  36083887 aacagctttagcc--attttcttaaagggctttattttaactttattttaaagtagtttttaga 36083948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40308340 - 40308412
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  40308340 aaaaaataataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 789108 - 789026
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  789108 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 8314829 - 8314987
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||| ||||            |||| ||||||||||    
T  8314829 aaaaaataataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact--aaaaaaaaattaaaaaaaccaaaca 8314926  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  8314927 actttag--ttttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 8314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 40506884 - 40506809
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  40506884 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactt 40506809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 42111877 - 42111726
Alignment:
Q  28 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 127  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||            |||||||| ||||||| ||    
T  42111877 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataact----aaaaaaaataaagaaatcaaacagttt 42111782  T
Q  128 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    || |        |||||||| |||||||||||||||||||||||||||||||||||||    
T  42111781 taac--tttttccttaaagaactttattttaactttgttttaaagtagcttttagacc 42111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 42416790 - 42416955
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| ||              |||||    
T  42416790 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa---taaaaaaaaaataaag 42416886  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||||| ||||| |        ||||||| |||||||||||||||||||||||||||||||||||||    
T  42416887 aaaccaaacaactttaac--ttttttcttaaagggctttattttaactttgttttaaagtagcttttagac 42416955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 790142 - 789977
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||            ||||||    
T  790142 acaccaccaaaaaaataataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaaga 790047  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||| || |||| |        ||||||||||||||||||||||||||||||||||| |||||||||||    
T  790046 aaccaaatagttttaac--ttttttcttaaagagctttattttaactttgttttaaagtaccttttagaccg 789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 7536645 - 7536800
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || |||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  7536645 aaaaaaaaaaaaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 7536742  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
     |||||||        |||||||| |||||||||||||||||||||||||||||||||||    
T  7536743 actttagc--tttttccttaaagaactttattttaactttgttttaaagtagcttttaga 7536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 28991021 - 28990940
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttaaaa 94  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||    
T  28991021 agacaccatcataaaataataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaatagctttaaaa 28990940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 19270905 - 19270977
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||| ||||||||||    
T  19270905 aaaaaataataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaatagctttaaaact 19270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 31958465 - 31958390
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 90  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  31958465 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaataacttt 31958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 37147067 - 37147139
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  37147067 aaaaaaaaaaaaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 30503613 - 30503448
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||| ||||            ||||||    
T  30503613 acaccaccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact--aaaaaaaaattaaaga 30503516  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||| ||||| |        ||||||||| |||||||||||||||||||||||||||||||||||    
T  30503515 aaccaaacaactttaac--ttttttcttaaagagttttattttaactttgttttaaagtagcttttagac 30503448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 30543956 - 30543791
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||| ||||            ||||||    
T  30543956 acaccaccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact--aaaaaaaaattaaaga 30543859  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||| ||||| |        ||||||||| |||||||||||||||||||||||||||||||||||    
T  30543858 aaccaaacaactttaac--ttttttcttaaagagttttattttaactttgttttaaagtagcttttagac 30543791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 14205524 - 14205570
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14205524 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 14205570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 424 - 554
Target Start/End: Original strand, 14281149 - 14281279
Alignment:
Q  424 tggcccggccttaaactctcccgccctctcaccgactctgtcgccgacaccgacgatatagctcagccgctcttccgctttctcgccaactacattgcaa 523  Q
    ||||||||| |  |||||||||||||||||||||||| | || ||||| ||||| | ||| |||| || |||| ||| || ||||||||||||||||| |    
T  14281149 tggcccggcatcgaactctcccgccctctcaccgactatctctccgaccccgacaaaataactcacccactctaccgtttcctcgccaactacattgcta 14281248  T
Q  524 ctaaaaccacttccctctctcaagtcgagat 554  Q
    | |||||| |||||||| |  ||||||||||    
T  14281249 caaaaacctcttccctcaccgaagtcgagat 14281279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 39782952 - 39783116
Alignment:
Q  18 accaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt-aaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||| |||||| || |||||| | ||||||||||||||||||| ||||||||| |||||||||||| ||||||            |||||||    
T  39782952 accaccaaaaaagtaataagtttaaagttgt-tacaatattttgccaaacaacttttaactgaaaaataactttcaaaactaaaaaataa---taaagaa 39783047  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||| |        |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39783048 accaaacagctttaac--ttattccttaaagaactttattttaactttgttttaaagtagcttttaaaccg 39783116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 1060706 - 1060776
Alignment:
Q  25 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||| |||||||    
T  1060706 aaaaataataaattcaaagttt-gtacaatattttgtcaaacaatttttaacttaaaaataactctaaaact 1060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 14720185 - 14720252
Alignment:
Q  29 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| || || ||||||| ||||||||||    
T  14720185 ataataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaatagctttaaaact 14720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 29382659 - 29382576
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||||||||| |||  |||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29382659 gacaccaccaaaaaaataataaatttaaaaattttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 30503719 - 30503673
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30503719 cttaaagagctttattttaactttgttttaaagttgcttttagaccg 30503673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 30544062 - 30544016
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30544062 cttaaagagctttattttaactttgttttaaagttgcttttagaccg 30544016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 15875806 - 15875753
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataactttaaaa 15875753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 2001506 - 2001561
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactttaaaact 2001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 3213300 - 3213231
Alignment:
Q  26 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||| ||||||||||||| |||||| | |||||||  |||||| ||||||||||    
T  3213300 aaaataataaattcaaagttt-gtacaatattttgtcaaacaacatttaactttaaaatagctttaaaact 3213231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| |||||||| |||| ||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 16488089 - 16488044
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  16488089 cttaaagaactttattttaactttattttaaagtagcttttagacc 16488044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 31958344 - 31958299
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  31958344 cttaaagagttttattttaactttgttttaaagtagtttttagacc 31958299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||| |||||||| |||||||||||||||| ||||||||| |||| |||||||| ||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 788987 - 788943
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  788987 cttaaagagctttattttaagtttgttttaaagtaacttttagac 788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 18041256 - 18041185
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| |||| |||||| |||||||||| ||||| | ||||||| ||||||| ||||||||||    
T  18041256 aaaaaataataaatttaaag-tttgtaaaatattttgcgaaacaacatttaacttaaaaatagctttaaaact 18041185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 36515113 - 36515058
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  36515113 aagttttgtacattattttgccaaacaacttttaactttaaaataattttaaaact 36515058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 37461872 - 37461914
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  37461872 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 37461914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 40506762 - 40506719
Alignment:
Q  142 taaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  40506762 taaagagttttattttaactttgttttaaaatagcttttagacc 40506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 3213194 - 3213148
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  3213194 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 3213148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 28887174 - 28887228
Alignment:
Q  14 agacaccaccaaaaaataataaa-ttcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||| || ||||||||||| || ||||||||||||||||||||||||||||    
T  28887174 agacaccatcataaaataataaaatttaaagttttgtacaatattttgccaaaca 28887228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 43354523 - 43354584
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  43354523 aaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 43354584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 15875710 - 15875673
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagct 177  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15875710 cttaaagacctttattttaactttgttttaaagtagct 15875673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 28887299 - 28887336
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||| |||||||||||    
T  28887299 ctttattttaactttgttttaaagtaacttttagaccg 28887336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 36515012 - 36514975
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||| |||||||||||||    
T  36515012 ctttattttaactttgttttaaaggagcttttagaccg 36514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 14205433 - 14205485
Alignment:
Q  44 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||||| ||||    
T  14205433 ttttgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 28869358 - 28869413
Alignment:
Q  29 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaat 84  Q
    |||| ||||| ||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  28869358 ataacaaatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2463637 - 2463683
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaac 66  Q
    ||||| |||| || ||||||||||||||||||||||||||| |||||    
T  2463637 caccacaaaaaaaaaaattcaaagttttgtacaatattttgtcaaac 2463683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 36242319 - 36242381
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaa 82  Q
    ||||| |||| || ||| |||||||||||||||||||||| |||||||  |||||||| ||||    
T  36242319 caccacaaaaaaaaaaaatcaaagttttgtacaatattttaccaaacaagttttaacttaaaa 36242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 14720303 - 14720340
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| ||||||||||||||||||||||| ||||||||||    
T  14720303 cttaattttaactttgttttaaagtagtttttagaccg 14720340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  55 attttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  55 attttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 33929003 - 33929055
Alignment:
Q  44 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||| ||||||| | ||||||| |||| || ||||||||||    
T  33929003 ttttgtacaatatttttccaaacaacatttaacttaaaagtagctttaaaact 33929055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 5e-51; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 18593692 - 18593499
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  18593692 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 18593596  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 212  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  18593595 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 18593499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 3850217 - 3850384
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  3850217 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 3850313  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  3850314 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgtttgaaagtagcttttacaccg 3850384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 559719 - 559886
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  559719 agacaccaccagaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaag 559815  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||    
T  559816 aaaccaaacaactttaacc--tttttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 559886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 32244369 - 32244535
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||            |||||    
T  32244369 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaact----aaaaaaaataaag 32244464  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32244465 aaaccaaacagttttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32244535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 20791538 - 20791705
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  20791538 agacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 20791634  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||| ||| ||       |||||||||||||||||||||||||||||||||||  ||||||||||    
T  20791635 aaaccaaacagccttaacc--tttttcttaaagagctttattttaactttgttttaaagtattttttagaccg 20791705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 28472213 - 28472380
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  28472213 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaataaataaag 28472310  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||| ||||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  28472311 aaaccaaacaactttatc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 28472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 33945905 - 33945738
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||              ||||    
T  33945905 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaaccaaaaaaaaaaaaaaaag 33945806  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||| |||||||||||| |       |||||| |||||||||||||||||||||||||||| ||||||||    
T  33945805 aaacaaaacagctttagtc--tttttcttaaaaagctttattttaactttgttttaaagtatcttttaga 33945738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 7541098 - 7541291
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||  ||||||||||||||| || ||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||            ||||||    
T  7541098 gacaccagaaaaaaataataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaaga 7541193  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaa 214  Q
    |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||    
T  7541194 aaccaaacagctttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacctaa 7541291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 24046642 - 24046560
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24046642 agacaccaccaaaggataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 6018656 - 6018490
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| | ||            |||||    
T  6018656 gacaccaccaaaaaaataataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagatct---aaaaaaaaataaag 6018560  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||| |        ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6018559 aaaccaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtaacttttagacc 6018490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 34247827 - 34247671
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  34247827 aaaaaataataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 34247732  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |        |||||||| ||||||||||||||||||||||||||||||||||||||    
T  34247731 gctttaac--tttttccttaaagaactttattttaactttgttttaaagtagcttttagaccg 34247671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 17505488 - 17505645
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||| ||||||||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  17505488 aaaaaattataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaactaaaaataaa---taaagaaaccaaaca 17505584  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  17505585 gctttaa--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17505645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 29859401 - 29859569
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||  ||| ||||            |||||    
T  29859401 gacaccaccaaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaact-aaaaaaataaataaag 29859499  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||| ||||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  29859500 aaaccaaacaactttatc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 29859569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 6833553 - 6833620
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6833553 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataatttta 6833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 5414634 - 5414562
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  5414634 aaaaattaataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 34207075 - 34207003
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  34207075 aaaaaataataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 10945711 - 10945778
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  10945711 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataacttta 10945778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 186
Target Start/End: Original strand, 19988908 - 19989048
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnn 139  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||            |||||||||||||||||||||  |           
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact----ataaaaaataaagaaaccaaacagcttta--catttttt 19989001  T
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||    
T  19989002 ctaaaagagctttattttaactttgttttaaagtagattttagaccg 19989048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 24162794 - 24162866
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||| ||| ||||||||||||| ||||    
T  24162794 aaaaaataataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 29043209 - 29043281
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29043209 aaaaaaaaaaaaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 3053987 - 3053915
Alignment:
Q  23 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  3053987 caaaaaataataaatttaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 3053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 173134 - 173062
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||||||| |||| ||||    
T  173134 aaaaaataataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 8866970 - 8867037
Alignment:
Q  29 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  8866970 ataataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 8867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 18314008 - 18314078
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac 95  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| | ||||| | |||||||||||||||||    
T  18314008 aaaaaataataaattcaaagttt-gtacaatattttgccacacaacatttaaattaaaaataactttaaaac 18314078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 34206973 - 34206927
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  34206973 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 34206927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 10943111 - 10943067
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  10943111 cttaaagagctttattttaactttgttttaaagtagattttagac 10943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 173013 - 172967
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  173013 cttaaagagttttattttaactttgttttaaagtagtttttagaccg 172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 24046524 - 24046478
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  24046524 cttaaatagttttattttaactttgttttaaagtagcttttagaccg 24046478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 247420 - 247462
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  247420 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 247462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 12582529 - 12582487
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12582529 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 12582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 29043319 - 29043358
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttt 179  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  29043319 cttaaagagctctattttaactttgttttaaagtagcttt 29043358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 28231136 - 28231075
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  28231136 aaattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 28231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 29976317 - 29976359
Alignment:
Q  25 aaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  29976317 aaaaataataaatttaaagttttgtacaatatttttccaaaca 29976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 29977738 - 29977784
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  29977738 cttaaagagctttatttaaactttgttttaaaatagtttttagaccg 29977784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 5414523 - 5414482
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  5414523 cttaaagagttttattttaactttgttttaaaatagctttta 5414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 10945820 - 10945864
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||    
T  10945820 cttaaagaactttattttaactttgttttaaagtaaattttagac 10945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 24162914 - 24162948
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||||||||||||||||| |||||||    
T  24162914 ctttattttaactttgttttaaagtagtttttaga 24162948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 33976004 - 33976056
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaact 77  Q
    |||||||||||||||||||| |||||| ||||||||| |||||| | |||||||    
T  33976004 aaaaaataataaattcaaag-tttgtataatattttgtcaaacaacatttaact 33976056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 33976119 - 33976156
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  33976119 ctttattttaactttgttttgaagtaacttttagaccg 33976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 8872681 - 8872725
Alignment:
Q  52 aatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||  |||||||| ||||||| ||||||||||    
T  8872681 aatattttgccaaacaagttttaacttaaaaatagctttaaaact 8872725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 7400291 - 7400123
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  7400291 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 7400194  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7400193 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7400123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 13891078 - 13890909
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  13891078 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 13890980  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  13890979 aaaccaaacagctttaacc--ttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 13890909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 53274619 - 53274787
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  53274619 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 53274716  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  53274717 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 55208570 - 55208400
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||            |||||    
T  55208570 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaactaaaaaaaaaaaataaag 55208471  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||    
T  55208470 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 55208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 7365787 - 7365954
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||    
T  7365787 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact---aaaaaaaaataaag 7365883  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7365884 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7365954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 1166630 - 1166796
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  1166630 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 1166725  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  1166726 aaaccaaacagttttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 1169112 - 1169278
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  1169112 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 1169207  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  1169208 aaaccaaacagttttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1169278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 11200824 - 11200992
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||    
T  11200824 agacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact--aaaaaaaaaataaag 11200921  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  11200922 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 11200992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 17624651 - 17624821
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||            |||||    
T  17624651 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact-aaaaaaaaaaataaag 17624749  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17624750 aaaccaaacagctttagcc-ttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 17624821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 26111369 - 26111539
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||||    
T  26111369 agacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 26111467  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  26111468 aaaccaaacagctttagcc-ttttatcttaaagaactttattttaactttgttttaaagtagcttttagaccg 26111539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27288556 - 27288389
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  27288556 agacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaag 27288460  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||| |||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  27288459 aaaccgaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 55991810 - 55991979
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||            |||||    
T  55991810 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact-aaaaaaaaaaataaag 55991908  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  55991909 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 55991979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 32206678 - 32206509
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  32206678 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaataaataaag 32206580  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| ||||| |||||| ||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32206579 aaatcaaacggctttaacc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32206509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 40950936 - 40951103
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  40950936 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---ataaaaaaataaag 40951032  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||||||||| ||       ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  40951033 aaatcaaacagctttaacc--tttttcttaaagagttttattttaactttattttaaagtagcttttagaccg 40951103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 28116924 - 28116721
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact------nnnnnnnnnnnn 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                      
T  28116924 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaaaaaaa 28116825  T
Q  109 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggt 208  Q
    ||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||    
T  28116824 taaagaaaccaaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgtaaaaaagtctgatcaaacggt 28116727  T
Q  209 acctaa 214  Q
    ||||||    
T  28116726 acctaa 28116721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 34264714 - 34264550
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||            |||||    
T  34264714 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact---acaaaaaaataaag 34264618  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||| ||       ||||||||| |||||||||||||||| |||||||||||||||||    
T  34264617 aaaccaaacagctttaacc--tttttcttaaagagttttattttaactttgtattaaagtagcttttaga 34264550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 55188161 - 55188328
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  55188161 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 55188257  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||||||       |||||||||||||||||||||||| ||||||| ||  ||||||||||    
T  55188258 aaaccaaacagttttagcc--tttttcttaaagagctttattttaactttattttaaaataatttttagaccg 55188328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 10137965 - 10137883
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10137965 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 6940260 - 6940178
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6940260 agacgccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 8847929 - 8848097
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  8847929 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaag 8848026  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8848027 aaaccaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttgtagaccg 8848097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 11967086 - 11966923
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||            |||||    
T  11967086 agacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact----aaaaaaaataaag 11966991  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||| |||| ||       ||||||||| ||||||||||||||||||||||||| ||||||||    
T  11966990 aaaccaaacagttttaacc--tttttcttaaagagttttattttaactttgttttaaagtaacttttaga 11966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 36190141 - 36189974
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||            |||||    
T  36190141 agacaccatcaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact---aaaaaaaaataaag 36190045  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||  |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  36190044 aaaccaaacagatttgac--atttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 36189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 17976438 - 17976604
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||||            |||||    
T  17976438 gacaccaccaaaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact----aaaaaaaataaag 17976533  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17976534 aaaccaaacagttttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 17976604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 23628826 - 23628990
Alignment:
Q  15 gacaccaccaaa-aaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  23628826 gacaccaccaaagaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaag 23628921  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||| ||||          |||||||| ||||||||||||||||||||||||||||||||||||    
T  23628922 aaaccaaacagtttta--agtttttccttaaagaactttattttaactttgttttaaagtagcttttagac 23628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 29099707 - 29099625
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29099707 agacaccaccaaaaaataataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 18138327 - 18138408
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||||    
T  18138327 gacaccaccaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 24303884 - 24303720
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||            ||||||    
T  24303884 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact----aaaaaaaataaaga 24303789  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||| |||||||||        ||||||  |||||||||||||||| |||||||||||||||||||||    
T  24303788 aaccaaatagctttagc--tttttccttaaatggctttattttaactttattttaaagtagcttttagacc 24303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 26097723 - 26097651
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  26097723 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 32200799 - 32200716
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||    
T  32200799 agacaccaccaaaaaagtaataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 37873728 - 37873560
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||| | ||||||||||||| ||||            |||||    
T  37873728 gacaccaccaaaaaaataataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact--aaaaaaaaaataaag 37873631  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagcttta-ttttaactttgttttaaagtagcttttagacc 185  Q
    ||||||||||| ||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  37873630 aaaccaaacagttttagc--tttttccttaaagagctttatttttaactttgttttaaagtagcttttagacc 37873560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 11180909 - 11180981
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  11180909 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 39651736 - 39651889
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||            |||||||||||||||    
T  39651736 aaaaaaaaaaaaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataactttaactct-------aaaaataaagaaaccaaaca 39651828  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39651829 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 41144377 - 41144305
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  41144377 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 43117519 - 43117591
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  43117519 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 46045867 - 46045716
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  46045867 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 46045771  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||  |        |||||| ||||||||||||||||||||||||||||||||||||||||    
T  46045770 actttttc--------cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 46045716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 28361565 - 28361410
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || ||| |||||||||||||||||||||||||||||| ||||||||| |||||||| || | ||||            |||||||||||||||    
T  28361565 aaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattcataactaaaaaaaa----taaagaaaccaaaca 28361470  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||||        || |||||||||||||||||||||||||||||||||||||||||||    
T  28361469 gctttagc--tttttcctgaaagagctttattttaactttgttttaaagtagcttttagacc 28361410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 20681186 - 20681268
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20681186 gacaccaccaaaaaaataataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 32139419 - 32139573
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact--nnnnnnnnnnnntaaagaaaccaaacagctttagc 131  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||              | |||||||||||||||||||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaactaaaactaaaaaaaatgaagaaaccaaacagctttagc 32139518  T
Q  132 cnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
            | |||| | ||||||||||||||||||||||||||||||||||||||    
T  32139519 ttttttttcctaaaaaactttattttaactttgttttaaagtagcttttagaccg 32139573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 49125536 - 49125618
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||||    
T  49125536 gacaccaccaaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 40665513 - 40665593
Alignment:
Q  16 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  40665513 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 22556965 - 22557037
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  22556965 aaaaaataataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 40849729 - 40849801
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| ||||    
T  40849729 aaaaaataataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 8151202 - 8151359
Alignment:
Q  23 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaac 122  Q
    ||||||| || |||||||||||||||||||| |||||| |||||| ||||||||| |||||||| |||| ||||            ||||||||||||||    
T  8151202 caaaaaaaaaaaaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaactaaaaaaaaa---taaagaaaccaaac 8151297  T
Q  123 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    | ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  8151298 aactttag--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8151359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 346679 - 346520
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||| ||||||||||||| ||||||||| | ||||||||| || |||||||||| ||||            |||||||||||||||    
T  346679 aaaaaataataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact-aaaaaaaataataaagaaaccaaaca 346581  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||          |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  346580 gcttta--attttttccttaaagagctttatttttactttgttttaaagtagcttttaaaccg 346520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 24631181 - 24631102
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||| |||||||  |||||||||    
T  24631181 acaccaccaaaaaataataaattcaaagtatt-tacaatatttttccaaacaacttttaacttaaaaatagttttaaaact 24631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 8654386 - 8654320
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  8654386 aaaaaataataaattcaaagttttgtacaata-tttgccaaacaatttttaacttaaaaataacttta 8654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 34663865 - 34663912
Alignment:
Q  18 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34663865 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 34663912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 45019226 - 45019181
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 45019181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 51153499 - 51153552
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataacttta 51153552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 34663936 - 34664012
Alignment:
Q  109 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  34663936 taaagaaaccaaacaactttagcctttttt-cttaaagagctttattttaactttattttaaagtagcttttagaccg 34664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 51187608 - 51187683
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 89  Q
    ||||||||||||||| || |||||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  51187608 gacaccaccaaaaaaatattaaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataactt 51187683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 32200679 - 32200633
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32200679 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 32200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 45472518 - 45472468
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45472518 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaa 45472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 52620733 - 52620779
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  52620733 cttaaagagctttattttaactttgttttaaagtaacttttagaccg 52620779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 25881932 - 25881992
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataaatgtaaaact 25881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 30071346 - 30071414
Alignment:
Q  28 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||| ||||    
T  30071346 aataataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataact 30071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 34664934 - 34664978
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  34664934 ttaaagaactttattttaactttgttttaaagtagcttttagacc 34664978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 18138452 - 18138495
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  18138452 ttaaagagctttattttaactttattttaaagtagcttttagac 18138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 49125663 - 49125706
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  49125663 ttaaagagctttattttaactttattttaaagtagcttttagac 49125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 52620629 - 52620680
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaa 65  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52620629 gacaccaccaaaaaaataataaattcagagttttgtacaatattttgccaaa 52620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 10581946 - 10581901
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  10581946 ttaaagagctttattttaattttgttttaaagtagtttttagaccg 10581901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 40952041 - 40952093
Alignment:
Q  44 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  40952041 ttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 10262069 - 10262027
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10262069 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 10262027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 21562386 - 21562428
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  21562386 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 21562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 24080140 - 24080098
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24080140 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 24080098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 43329907 - 43329949
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  43329907 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 43329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 45019261 - 45019226
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgt 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  45019261 agacaccaccaaaaaataataaattcaaagttttgt 45019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 9097543 - 9097470
Alignment:
Q  22 ccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||| || ||| ||||||||| |||||||||||||||||||| | ||||||| ||||||| ||| ||||||    
T  9097543 ccaaaaaaaaaaaaaatcaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagcttgaaaact 9097470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 20681304 - 20681348
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  20681304 ttaaagagctttattt-aactttattttaaagtagcttttagaccg 20681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 29346287 - 29346227
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  29346287 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 29346227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 35832051 - 35831991
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  35832051 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 35831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 44856696 - 44856741
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  44856696 ttaaagggctttattttaactttgttttaaaggagcttttaaaccg 44856741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 26927010 - 26926968
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26927010 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 26926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 43117629 - 43117668
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttt 179  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  43117629 cttaaaaagctttattttaactttgtttttaagtagcttt 43117668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 51449973 - 51450015
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  51449973 aaaaaataataaatttaaagttt-gtacaatattttgccaaaca 51450015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 8654276 - 8654230
Alignment:
Q  141 ttaaagagctttattttaactttgtttt-aaagtagcttttagaccg 186  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  8654276 ttaaagggctttattttaactttgttttaaaagtaacttttagaccg 8654230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 9097433 - 9097387
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  9097433 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 9097387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 24631064 - 24631018
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| | |||||||||||||||| || ||||||||||||||||||    
T  24631064 cttaaaaacctttattttaactttgattcaaagtagcttttagaccg 24631018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 41106052 - 41106098
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||||||    
T  41106052 cttaaagggctttattttatctttgttttaaaggagtttttagaccg 41106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 18002543 - 18002494
Alignment:
Q  23 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttt 72  Q
    ||||||| || ||| |||||||||||||||||||||| ||||||| ||||    
T  18002543 caaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttt 18002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 41105971 - 41106012
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaa 82  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  41105971 aagttttatacaatattttgccaaacaacttttaacttaaaa 41106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 18002484 - 18002441
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||    
T  18002484 cttaaatagctgtattttaactt-gttttaaagtagcttttagac 18002441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 26871668 - 26871609
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  26871668 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 26871609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 30071452 - 30071484
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaag 172  Q
    |||||||| ||||||||||||||||||||||||    
T  30071452 cttaaagatctttattttaactttgttttaaag 30071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 40952131 - 40952175
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| | ||||||||||||||| ||||||||||| ||||||||    
T  40952131 cttaaaaaactttattttaactttattttaaagtagtttttagac 40952175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 101; Significance: 9e-50; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 7442 - 7610
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  7442 acaccaccaaaaaataataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataataaagaa 7541  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7542 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 4592 - 4431
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||            |||||||    
T  4592 acaccaccaaaaaataataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaa 4497  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  4496 accaaacagctttagc--atttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 9e-50; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 970946 - 971142
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  970946 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 971043  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtaccta 213  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||    
T  971044 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtaccta 971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 8878112 - 8878280
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  8878112 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 8878209  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  8878210 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8878280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 7274664 - 7274831
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||    
T  7274664 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaaga 7274761  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7274762 aaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 36086029 - 36085861
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  36086029 agacaccaccaaaaagtaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaataaataaag 36085932  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36085931 aaaccaaacagctttagcc--tttttcttaaagatctttattttaactttgttttaaagtagcttttagaccg 36085861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 1835678 - 1835844
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             |||     
T  1835678 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaa----aaaa 1835773  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  1835774 aaaccaaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1835844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 24926165 - 24926005
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  24926165 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 24926069  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    |||||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||    
T  24926068 accaaacagctttagcc--tttttcttaaagagctttattttaactttgtttaaaagtagctttta 24926005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 31972275 - 31972442
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  31972275 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 31972371  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||| ||||    
T  31972372 aaaccaaacagctttaac--atttttcttaaagagctttattttaactttgttttaaagtagcttttaaaccg 31972442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 5166259 - 5166427
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  5166259 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 5166356  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||  ||       ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5166357 aaaccaaacagcttttacc--tttttcttaaagagctttattttaactttgttttaaagtagctttttgaccg 5166427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 8683652 - 8683819
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||            |||||    
T  8683652 agacaccaccaaaaaataataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 8683748  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  8683749 aaaccaaatagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8683819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 3324346 - 3324178
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||            |||||    
T  3324346 agacaccaccaaaaaataataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 3324249  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  3324248 aaaccaaacagctttaacctttttt--ttaaagagctttattttaactttgttttaaagtagcttttagaccg 3324178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 4631203 - 4631369
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact-nnnnnnnnnnnntaaaga 114  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |             ||||||    
T  4631203 acaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaataaaataaaga 4631302  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  4631303 aaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4631369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 18166911 - 18166749
Alignment:
Q  18 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||    
T  18166911 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaac 18166816  T
Q  118 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||||||||||||        ||||||| |||||||||||||||||||||||||| |||||||||||    
T  18166815 gaaacagctttagcctttttt--ttaaagaactttattttaactttgttttaaagtaacttttagaccg 18166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 3243377 - 3243209
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  3243377 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaag 3243280  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  3243279 aaaccaaacagcttta--cctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3243209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 7233016 - 7233098
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7233016 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 668375 - 668206
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| | ||||||||||||| ||||            ||||||    
T  668375 gacaccaccaaaaaataataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaactaaaaaaaaaaaataaaga 668276  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||| |||||||        |||||||| ||||||||||||||||||||||||||||||||||||||    
T  668275 aaccaaacaactttagc--ttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 17032895 - 17032728
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||            |||||    
T  17032895 agacaccacaaaaaaaaaaaaaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact---aaaaaaaattaaag 17032799  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17032798 aaaccaaacaactttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17032728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 3079720 - 3079876
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||||            |||||||||||||||    
T  3079720 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact----aaaaaaaataaagaaaccaaaca 3079815  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    | ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  3079816 gttttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 34912654 - 34912810
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  34912654 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 34912749  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  34912750 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 34912810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 40202218 - 40202374
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  40202218 aaaaaataataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 40202313  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  40202314 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 40202374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 20313294 - 20313162
Alignment:
Q  50 acaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagc 149  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       ||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaa--taaagaaaccaaacagctttagccttttt--cttaaagagc 20313199  T
Q  150 tttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20313198 tttattttaactttgttttaaagtaacttttagaccg 20313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 36078637 - 36078481
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||             |||||    
T  36078637 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaactaaaaaa-------aaaga 36078545  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    || ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  36078544 aatcaaacagctttagc---ttttttttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 9799405 - 9799239
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||| |||||||||| |            |||||||    
T  9799405 acaccactaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaactttaaaattaaaaacaaaaaataaagaa 9799306  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||| |||| |        || |||||||||||||||| |||||||||||||||||||||||||    
T  9799305 accaaacagttttaac--ttctttctcaaagagctttattttatctttgttttaaagtagcttttagac 9799239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 38879129 - 38879211
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  38879129 gacaccaccaaaaaaataataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 10120612 - 10120770
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  10120612 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact--aaaaaattaataaagaaaccaaaca 10120709  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||          ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  10120710 gcttta--attttttccttaaagagttttattttaattttgttttaaagtagcttttagaccg 10120770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 1117981 - 1118136
Alignment:
Q  24 aaaaaataataaattcaaagttt--tgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaa 121  Q
    ||||||||||||||||||||||   |||||||||||||| |||||| ||||||||| ||||||||||||| ||||            ||||||||| |||    
T  1117981 aaaaaataataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaactaaa 1118076  T
Q  122 cagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||    
T  1118077 cagctttagc--tttttccttaaagagttttattttaactttgttttaaagtagcttttaga 1118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 35423789 - 35423939
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| | ||||            |||||||||||||||    
T  35423789 aaaaaataataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact----aaaataaataaagaaaccaaaca 35423884  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||  |         ||||||||||||||||||||||||||||||||||||||||||||||    
T  35423885 actttttc--------tttaaagagctttattttaactttgttttaaagtagcttttagaccg 35423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 41452818 - 41452974
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  41452818 aaaaaaaaaaaaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 41452913  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||| |        ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41452914 actttaac--tttttccttaaagagttttattttaactttgttttaaagtagctttaagaccg 41452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 45474725 - 45474797
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  45474725 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 17051110 - 17051064
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17051110 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 17051064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 38709708 - 38709765
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 38959687 - 38959564
Alignment:
Q  53 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 152  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||            ||||||||||||||| ||||||||       |||||||||||||    
T  38959687 atattttgtcaaacagcttttaactcaaaaataattttagaactaaaaaaaaa---taaagaaaccaaacaactttagccttttt--cttaaagagcttt 38959593  T
Q  153 attttaactttgttttaaagtagctttta 181  Q
    |||||||||||||||||||||||||||||    
T  38959592 attttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 2180011 - 2180093
Alignment:
Q  15 gacaccaccaaaaaataataaat-tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| || |||  ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  2180011 gacaccaccaaaaaaaaaaaaaaatcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 17051220 - 17051167
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  17051220 agacaccacaaaaaaataataaattctatgttttgtacaatattttgccaaaca 17051167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 3708454 - 3708496
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  3708454 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 3708496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 11868962 - 11868920
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  11868962 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 11868920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 35360355 - 35360313
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  35360355 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 35360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 37522706 - 37522763
Alignment:
Q  31 aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 88  Q
    |||||| ||||| |||||||||| |||||||||||||  |||||||| ||||||||||    
T  37522706 aataaaatcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 35287377 - 35287306
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || ||||||||||||| |||||||||||| ||||||| | ||||||| |||| || ||||||||||    
T  35287377 aaaaaaaaaaaaattcaaagttt-gtacaatatttttccaaacaacatttaacttaaaagtagctttaaaact 35287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 1692675 - 1692624
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  1692675 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 1692624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 35287269 - 35287226
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  35287269 cttaaaggcctttattttaactttgttttaaagtaacttttaga 35287226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 2180132 - 2180178
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  2180132 cttaaagagctttattttaaatttattttatagtagtttttagaccg 2180178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 13549536 - 13549490
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  13549536 cttaaagagttttattttaactttgttttaaaataatttttagaccg 13549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 32292307 - 32292345
Alignment:
Q  148 gctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  32292307 gctttattttaactttgttttaaagtaactttaagaccg 32292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 38879249 - 38879291
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttag 182  Q
    ||| |||| ||||||||||||||| ||||||||||||||||||    
T  38879249 ctttaagaactttattttaactttattttaaagtagcttttag 38879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 174
Target Start/End: Original strand, 45474836 - 45474870
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagta 174  Q
    |||||||||||||||||||||||| ||||||||||    
T  45474836 cttaaagagctttattttaactttattttaaagta 45474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 20642015 - 20641972
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||    
T  20642015 cttaaatagctgtattttaactt-gttttaaagtagcttttagac 20641972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 20642073 - 20642025
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttt 72  Q
    |||||| || ||| |||||||||||||||||||||| ||||||| ||||    
T  20642073 aaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttt 20642025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 17313621 - 17313456
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  17313621 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 17313525  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  17313524 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17313456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 17046092 - 17045924
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  17046092 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 17045995  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  17045994 aaaccaaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17045924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 27467703 - 27467872
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  27467703 agacaccaccaaaaaaaaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 27467801  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  27467802 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 34805780 - 34805949
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||            |||||    
T  34805780 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact-aaaaaaaaaaataaag 34805878  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  34805879 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 34805949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 7219370 - 7219537
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||            |||||    
T  7219370 agacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact---aaaaaaaaataaag 7219466  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7219467 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 14718858 - 14719025
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  14718858 agacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 14718954  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14718955 aaaccaaatagctttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 14719025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 16239250 - 16239083
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  16239250 agacaccactataaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaag 16239154  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  16239153 aaaccaaacagctttaacc--tttatcttaaagagctttattttaactttgttttaaagtagcttttagaccg 16239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 39685414 - 39685581
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  39685414 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 39685510  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||| |       |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  39685511 aaaccaaacagctttagtc--tttttcttaaagagctttattttaactttattttaaaatagcttttagaccg 39685581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 41360981 - 41361148
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||            |||||    
T  41360981 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagtact---aaaaaaaaataaag 41361077  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  41361078 aaaccaaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41361148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 43818046 - 43817879
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||            |||||    
T  43818046 agacaccaccaaaaaataataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaag 43817950  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||| || ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43817949 aaaccaaacagctataacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 16845019 - 16845186
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||            |||||    
T  16845019 agacatcagcaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact---aaaaaaaaataaag 16845115  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16845116 aaatcaaacagctttagcc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 16845186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 38139303 - 38139471
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  38139303 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaataaaataaag 38139400  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| |||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  38139401 aaaccaaacaacttta--cctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 38139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 44603017 - 44602854
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  44603017 acaccaccaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 44602922  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||||       | |||||||||||||||||||||||||||||| ||| ||||||||||    
T  44602921 accaaacaactttagcc---ttttcgtaaagagctttattttaactttgttttaaaatagtttttagaccg 44602854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 44908488 - 44908649
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||||    
T  44908488 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaaga 44908584  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||     |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  44908585 aacc-----gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 44908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 11924758 - 11924926
Alignment:
Q  14 agacaccaccaa-aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            ||||    
T  11924758 agacaccaccaagaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact---gaaaaaaaataaa 11924854  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||||||||||||||||        ||||||| | |||||||||||||||||||||||||||||||||||||    
T  11924855 aaaaccaaacagctttagc--ttttttcttaaagggttttattttaactttgttttaaagtagcttttagaccg 11924926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 169786 - 169620
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||            ||||||    
T  169786 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact----aaaagaaataaaga 169691  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||        ||||||  ||||||||||||||| ||||||||||||||||||||||    
T  169690 aaccaaacagctttagccttttttt-ttaaaggactttattttaactttattttaaagtagcttttagaccg 169620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 2184492 - 2184410
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  2184492 agacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 6816024 - 6816189
Alignment:
Q  16 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            ||||||    
T  6816024 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact-aaaaaaaaaaataaaga 6816122  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    || ||||||||||||| |        |||||| ||||||||||||||||||||||||||||||||||||    
T  6816123 aatcaaacagctttagtctttttt--ttaaagggctttattttaactttgttttaaagtagcttttaga 6816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 36216658 - 36216576
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  36216658 agacaccacaaaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 39486108 - 39485942
Alignment:
Q  17 caccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||            |||||||    
T  39486108 caccaccaaaataataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaact--aaaaaaaaaataaagaa 39486011  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    | |||||||||||| |        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39486010 aacaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcctttagaccg 39485942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 26518878 - 26518714
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||            ||||    
T  26518878 agacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa-tttagaact---aaaaaaaaataaa 26518783  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    || |||||||| ||||||||       ||||||||||||||| |||||||| |||||||||||||||||||    
T  26518782 gacaccaaacaactttagcc--tttttcttaaagagctttatcttaactttattttaaagtagcttttaga 26518714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 36059358 - 36059276
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  36059358 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 37034816 - 37034984
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  37034816 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaattaaaa--taaag 37034913  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| | |||||||        ||||||||||| |||||||||||||||||||||||  ||||||||||    
T  37034914 aaaccaaataactttagc--tttttccttaaagagctatattttaactttgttttaaagtaaattttagaccg 37034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 39 - 218
Target Start/End: Original strand, 39997991 - 39998166
Alignment:
Q  39 caaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnn 138  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||          
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaacagctttagcc--tttt 39998086  T
Q  139 ncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatat 218  Q
     |||| |||||||||||||||||||||||||||||| |||||||||||       |||||  ||||||||||||||||||    
T  39998087 tcttatagagctttattttaactttgttttaaagtatcttttagaccgaaaaaaagtctggccaaacggtacctaaatat 39998166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 38137791 - 38137634
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  38137791 aaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaatt---aaaaataaataaagaaaccaaaca 38137695  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     |||||  |       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  38137694 acttta--cctttttccttaaagagttttattttaactttgttttaaagtagcttttagaccg 38137634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 28 - 186
Target Start/End: Original strand, 39525458 - 39525610
Alignment:
Q  28 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 127  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||| ||||            ||||||||||||||| |||    
T  39525458 aataataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactt 39525553  T
Q  128 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    || |        |||| ||||||||||||||||||||||||||||||||||||||||||    
T  39525554 taac--ttttttcttatagagctttattttaactttgttttaaagtagcttttagaccg 39525610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 45139122 - 45138971
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || ||| ||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||            |||||||||||||||    
T  45139122 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaact----aaaaaaaataaagaaaccaaaca 45139027  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  45139026 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 1877659 - 1877578
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||| ||||    
T  1877659 gacagcacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 2190728 - 2190647
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||    
T  2190728 acaccaccaaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 11579194 - 11579350
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  11579194 aaaaaataacaaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 11579289  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |         ||||| || |||||||||||||||||||||||||||||||||||||    
T  11579290 gctttaac--tttttctttaaaaaggtttattttaactttgttttaaagtagcttttagaccg 11579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 37 - 186
Target Start/End: Original strand, 41526324 - 41526467
Alignment:
Q  37 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnn 136  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||            ||||||||||||||| ||||||          
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactttag--tttt 41526417  T
Q  137 nnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41526418 tttcttaaagagctttattttaactttgttttaaagtagcttctagaccg 41526467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 34997523 - 34997596
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 88  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||||||||| ||||||||| ||||||||||    
T  34997523 gacaccacaaaaaaataataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataact 34997596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 38909288 - 38909360
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || ||||||||| ||||||||||||| ||||    
T  38909288 aaaaaataataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 42844281 - 42844352
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  42844281 aaaaaataataaatttaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 12261532 - 12261387
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagcc 132  Q
    ||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||            ||||||||||||||||||||| |     
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaact----aaaaaaaataaagaaaccaaacagctttaac- 12261438  T
Q  133 nnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
           |||||||| ||||||||||||||| ||||||||||| ||||||||    
T  12261437 -tttttccttaaagaactttattttaactttattttaaagtagtttttagac 12261387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 44655059 - 44655224
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||| |||||||||| |||||||||||||||| || ||||||||||||| ||||| ||| ||||||||  ||| | ||            ||||||    
T  44655059 gacaccacaaaaaaataattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataaagttagagct----aaaaaaaataaaga 44655154  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    || ||||||||||||||        ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44655155 aatcaaacagctttagc--tttttccttaaagagctttattttatctttgttttaaagtagctttaagaccg 44655224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27914929 - 27914984
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27914984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27961348 - 27961403
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 42844411 - 42844457
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42844411 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 42844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 1922389 - 1922457
Alignment:
Q  23 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||| | ||||||| ||||||||    
T  1922389 caaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaatttaaaaatagctttaaaa 1922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 15310398 - 15310470
Alignment:
Q  25 aaaaataataaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttaaaact 96  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||    
T  15310398 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 15490767 - 15490839
Alignment:
Q  25 aaaaataataaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttaaaact 96  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||    
T  15490767 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27748853 - 27748908
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  27748853 aagttttgcataatattttgccaaacaacttttaacttaaaaataactttaaaact 27748908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27877985 - 27878040
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 27878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 28018166 - 28018221
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 28018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 14449570 - 14449524
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  14449570 cttaaatagctttattttaactttgttttaaagtaacttttagaccg 14449524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 24511638 - 24511684
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  24511638 cttaaagatctttattttaactttgttttaaagtagcttttaaaccg 24511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 39201524 - 39201593
Alignment:
Q  26 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||  ||||||  |||||||||    
T  39201524 aaaataataaattcaaa-ttttgtacaatattttgccaaacaacatttaactttaaaatagttttaaaact 39201593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 39140760 - 39140716
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  39140760 cttaaagaactttattttaactttgttttaaagtaacttttagac 39140716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 42984098 - 42984142
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||    
T  42984098 cttaaagagctttatttcaactttgttttaaagtagtttttagac 42984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaa 83  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 20665663 - 20665621
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20665663 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 20665621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 33848669 - 33848630
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttt 179  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  33848669 cttaaggagctttattttaactttgttttaaagtagcttt 33848630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 41904778 - 41904829
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  41904778 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 41904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 45296836 - 45296785
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  45296836 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 45296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 33848772 - 33848722
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||| | |||| || ||||||||||||||||||||||||||||||||    
T  33848772 gacaccacaacaaaaaaaaaaattcaaagttttgtacaatattttgccaaa 33848722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 40048637 - 40048591
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  40048637 cttaaagaactttattttaactttattttaaaatagcttttagaccg 40048591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 35916526 - 35916481
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||    
T  35916526 cttaaagagctttattttaactttgttttaaagcagttttcagacc 35916481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 35916640 - 35916579
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaa 75  Q
    ||||||||| |||||| || |||| |||  |||||||||||||||||||||||| |||||||    
T  35916640 agacaccacaaaaaaaaaaaaaatccaatattttgtacaatattttgccaaacaacttttaa 35916579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 36059237 - 36059192
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||||    
T  36059237 ttaaagaactttatttgaactttgttttaaagtagcttttataccg 36059192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 36216537 - 36216492
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  36216537 ttaaagaactttattttaatttttttttaaagtagcttttagaccg 36216492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 1921795 - 1921835
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaa 64  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  1921795 aaaaaataataaattcaaagttgtgtataatattttgccaa 1921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Complemental strand, 2184369 - 2184329
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagctttt 180  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  2184369 cttaatgagctttattttaactttattttaaagtagctttt 2184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 2190598 - 2190558
Alignment:
Q  146 gagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  2190598 gagctttattttaactttattttaaagtagcttttggaccg 2190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||||||| ||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 22947687 - 22947644
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  22947687 cttaaaggcctttattttaactttgttttaaagtaacttttaga 22947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 30551026 - 30550984
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  30551026 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 30550984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 35004369 - 35004412
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  35004369 cttaaataactttattttaactttgttttaaagtagtttttaga 35004412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 44215775 - 44215733
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  44215775 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 44215733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 1877540 - 1877502
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttt 179  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1877540 ttaaagagctttattttatctttattttaaagtagcttt 1877502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 34325869 - 34325927
Alignment:
Q  29 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataac 87  Q
    |||||||||| ||| |||| |||||||||||| |||||| ||||||||| || ||||||    
T  34325869 ataataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataac 34325927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 39140852 - 39140798
Alignment:
Q  42 agttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||| ||||| ||||||||| |||| ||  |||||||||    
T  39140852 agttttgtacaatattttgctaaacaacttttaacttaaaattagttttaaaact 39140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 40048739 - 40048681
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaa-cagcttttaactcaaaaataacttta 91  Q
    ||||||||||||||| |||||||| ||| ||| || ||||||||| |||||||||||||    
T  40048739 aaattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataacttta 40048681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 45296748 - 45296702
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  45296748 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 45296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 29868604 - 29868649
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| | |||||||||||||| ||||||||||||| ||||||||    
T  29868604 ttaaagggttttattttaactttattttaaagtagctattagaccg 29868649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 41903183 - 41903138
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    ||||||| |||||||||||||||||||  |||||||| ||||||||    
T  41903183 aagttttatacaatattttgccaaacaaattttaacttaaaaataa 41903138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 12251539 - 12251480
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  12251539 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 12251480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 39201639 - 39201675
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  39201639 ctttattttaactttgttttgaagtaacttttagacc 39201675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 39443669 - 39443728
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  39443669 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 39443728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 54510469 - 54510302
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             ||||    
T  54510469 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaa---aaag 54510373  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  54510372 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54510302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 54741796 - 54741966
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  54741796 agacaccaccaaaaaataataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaataaag 54741895  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  54741896 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 29500325 - 29500493
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  29500325 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 29500422  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  29500423 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 29500493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 30269166 - 30268998
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  30269166 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 30269069  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  30269068 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 45599349 - 45599181
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  45599349 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 45599252  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  45599251 aaaccaaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 45599181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 22347162 - 22346994
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaata-ttttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||            ||||    
T  22347162 agacaccaccaaaaaataataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 22347066  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  22347065 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 22346994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 4018909 - 4019077
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  4018909 agacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 4019006  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  4019007 aaatcaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4019077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 7040874 - 7041041
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            |||||    
T  7040874 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact---aaaaaaaaataaag 7040970  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7040971 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 36592298 - 36592131
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||            |||||    
T  36592298 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact---aaaaaaaaataaag 36592202  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  36592201 aaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 36592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 14587469 - 14587301
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||            |||||    
T  14587469 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact--aaaaaaaaaataaag 14587372  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||| ||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  14587371 aaatcaaatagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 14587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 48545102 - 48545270
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||            |||||    
T  48545102 agacaccaccaaaaaataataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 48545199  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48545200 aaaccaaacagctttaacc--tttttcttaaagagctttattttaattttgttttaaagtagcttttagaccg 48545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 53022669 - 53022826
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  53022669 aaaaaataataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 53022765  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  53022766 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53022826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 52674776 - 52674942
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||            |||||    
T  52674776 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacag-ttttaactcaaaaataactttagtact---acaaaaaaataaag 52674871  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  52674872 aaaccaaacagctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52674942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33932568 - 33932402
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||            |||||    
T  33932568 agacaccaccaaaaaataataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 33932473  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||| |       |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  33932472 aaaccaaacagctttagtc--tttttcttaaagagctttattttaactttgttttagagtagtttttagaccg 33932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 52461020 - 52461188
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  52461020 agacaccacgaaaaaattataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 52461117  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| ||||||| ||||| |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  52461118 aaatcaaacagttttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 2909425 - 2909592
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |            |||||    
T  2909425 agacaccaccaaaaaataataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaatt--aaaaaacaaataaag 2909522  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||||||||||| ||       ||| |||||||||||||||||||||||||||||||||||||||||    
T  2909523 aaaccaaacagctttaacc-tttttccttgaagagctttattttaactttgttttaaagtagcttttagac 2909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 7265048 - 7265215
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||            |||||    
T  7265048 agacaccacaaaaaaataataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact---aaaaaaaaataaag 7265144  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  7265145 aaaccaaacaactttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7265215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 29450652 - 29450817
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |            |||||    
T  29450652 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaatt--aaaaaaaaaataaag 29450749  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||||||    
T  29450750 aaaccaaacagctttaacc--tttttcttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 39721252 - 39721418
Alignment:
Q  15 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  39721252 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaag 39721347  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39721348 aaaccaaacagctttag--ttttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 26881614 - 26881780
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||            ||||     
T  26881614 agacaccacaaaaaaataataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact----aaaaaaaataaat 26881709  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  26881710 aaaccaaacaactttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 26881780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 19536700 - 19536866
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||            |||||    
T  19536700 agacaccagcaaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact----aaaaaaaataaag 19536795  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||||||||||||       |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19536796 aaatcaaacagctttagcc--tttttcttaaagaactttattttaactttgttttaaattagcttttagaccg 19536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 50739157 - 50739313
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  50739157 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 50739252  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50739253 gctttagc--ttttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50739313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 50773698 - 50773542
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  50773698 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 50773603  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50773602 gctttagc--ttttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50773542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13450265 - 13450347
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  13450265 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 46757552 - 46757720
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||            ||||     
T  46757552 agacaccaccaaaaaataataaattcaaagttta-tacaatattttgccaaacagcttttaactcaaaaataactttagaact-gaaaaaaaaaataaaa 46757649  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||| |||||||||||| |       |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  46757650 aaactaaacagctttagtc--tttttcttaaaaagctttattttaactttgttttaaagtagcttttaaaccg 46757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 20849484 - 20849404
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  20849484 acaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 43316598 - 43316516
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  43316598 agacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 12101545 - 12101464
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  12101545 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 48961122 - 48961276
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||| ||              |||||||| ||||||    
T  48961122 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa------aaaaataataaagaaatcaaaca 48961215  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  48961216 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 48961276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 46090190 - 46090118
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46090190 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 42187832 - 42187665
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            ||||    
T  42187832 agacaccaccaaaaaaataataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataact----aaaaaaaataaa 42187737  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||        |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  42187736 gaaaccaaacagctttagcctttttt--ttaaagggctttatttaaactttgttttaaagtagcttttaaaccg 42187665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 15496541 - 15496385
Alignment:
Q  25 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacag 124  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||| || || ||||||||||||| ||||            ||||||||||||||||    
T  15496541 aaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacag 15496445  T
Q  125 ctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  15496444 ctttag--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 15496385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 36987810 - 36987654
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  36987810 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 36987715  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36987714 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 36987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 37013249 - 37013093
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  37013249 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 37013154  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37013153 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37013093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 37413561 - 37413724
Alignment:
Q  14 agacaccaccaa-aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||            || |    
T  37413561 agacaccaccaagaaaataataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataact---aaaagaaaatata 37413657  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    |||||||||||||||||||        |||||||  |||||||||||||||||||||||||||||||||    
T  37413658 gaaaccaaacagctttagc--ttttttcttaaaggactttattttaactttgttttaaagtagctttta 37413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 38361743 - 38361910
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  38361743 gacaccaccaaaaaaataataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaactaaaaaaaa----taaag 38361838  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       || ||  |  |||||||||||||||||||||||||||||||||||||    
T  38361839 aaaccaaacagcttta-cctttttccctaaagaaattttattttaactttgttttaaagtagcttttagaccg 38361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 47719487 - 47719641
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| || |            |||||||| |||| |    
T  47719487 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaatcaaata 47719582  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| |        |||||||||||||||||||||||||||||||||||||||||||||    
T  47719583 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagac 47719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 35690293 - 35690212
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  35690293 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 41990836 - 41990680
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  41990836 aaaaaataataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 41990741  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     ||||| |        |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  41990740 actttaac--ttttttcttatagaactttattttaactttgttttaaagtagcttttagaccg 41990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 46850783 - 46850711
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  46850783 aaaaaataataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 46850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 44762795 - 44762728
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44762795 aaaatataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataacttta 44762728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13337092 - 13337173
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||||    
T  13337092 agacaccacaaaaaaataataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 54203828 - 54203667
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||            |||||    
T  54203828 gacaccaccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact--aaaaaaaaaataaag 54203731  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||| || |||  |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  54203730 aaaccaaaaagttttttc--------cttaaagagctttattttaactttgttttaaagtagcttttagacc 54203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 54113415 - 54113487
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  54113415 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataact 54113487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 50933197 - 50933279
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || ||||||||||||||| ||| |||||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  50933197 agacacaacaaaaaaataataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 12996893 - 12996818
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 90  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||    
T  12996893 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatatttttccaaacaacttttaacttaaaaataacttt 12996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 875880 - 875926
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  875880 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 875926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 33899842 - 33899986
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnn 135  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||| ||||||        
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataact----aaaaaaaataaagaaaccaaacagttttagc--tt 33899935  T
Q  136 nnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
        |||||| | |||||||||||||||||||||||||| |||||||||||    
T  33899936 ttttcttaaaaaactttattttaactttgttttaaagtaacttttagaccg 33899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 875826 - 875884
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaa 75  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||    
T  875826 agacaccaccaaaaaata---aattcaaagttttgtacaatattttgccaaacagctcttaa 875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 12101423 - 12101377
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  12101423 cttaaagggctttattttaactttgttttaaagtagcttttagaccg 12101377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 35906766 - 35906684
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||| || ||||||| | |||||||| |||| ||||    
T  35906766 gacaccaccaaaaaaataatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 35529818 - 35529773
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  35529818 ttaaagggctttattttaactttgttttaaagtagcttttagaccg 35529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 10617639 - 10617695
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaatagttttaaaact 10617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 20996406 - 20996334
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || ||||||||| ||||||||||||||||| |||||| ||||||| | ||||||||||||| ||||    
T  20996406 aaaaaaaaaaaaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 54835729 - 54835801
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || ||| ||||| |||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  54835729 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataggtttaaaact 54835801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 8238921 - 8238972
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  8238921 tttgtacaatattttgccaaacaacatttaacttaaaaataactttaaaact 8238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||||||| ||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 54195754 - 54195692
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 86  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |  |||||||| ||||||||    
T  54195754 aaaaaataataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataa 54195692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 46850674 - 46850630
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||    
T  46850674 cttaaagacctttattttaactttgttttaaaatagcttttagac 46850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 13450390 - 13450432
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  13450390 cttaaagagcttt-ttttaactttgttttaaagtagcttttaga 13450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 44075456 - 44075414
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  44075456 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 44075414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 54113531 - 54113603
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 212  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||       ||||| |||||||||||||    
T  54113531 cttaaaggactttattttaactttgttttaaagtagtttttagaccgaaaaaaagtctggtcaaacggtacct 54113603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 34433501 - 34433455
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||    
T  34433501 cttaaaggactttatttaaactttgttttaaagtagcttttagaccg 34433455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 35690164 - 35690122
Alignment:
Q  144 aagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  35690164 aagaactttattttaactttgttttaaagtaacttttagaccg 35690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 44541231 - 44541277
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||    
T  44541231 cttaaagaactttattttaactttgttttaaaagagcttttagaccg 44541277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 46090078 - 46090037
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  46090078 cttaaagcgctttgttttaactttgttttaaagtagctttta 46090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 54796000 - 54795955
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||    
T  54796000 cttaaagacctttattttaactttgttttgaagtaacttttagacc 54795955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 10617736 - 10617768
Alignment:
Q  142 taaagagctttattttaactttgttttaaagta 174  Q
    |||||||||||||||||||||||||||||||||    
T  10617736 taaagagctttattttaactttgttttaaagta 10617768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 34433803 - 34433767
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttg 60  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34433803 aaaaaataataaattaaaagttttgtacaatattttg 34433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 22762347 - 22762296
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  22762347 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 22762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 50933332 - 50933367
Alignment:
Q  150 tttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||||||| |||||||||||||||    
T  50933332 tttattttaactttgttttagagtagcttttagacc 50933367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 54796088 - 54796037
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||| | |||| || ||||||| ||||||||||    
T  54796088 tttgtacaatattttgccaaacaacatttaccttaaaaatatctttaaaact 54796037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 916278 - 916315
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgcc 62  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  916278 aaaaaataataaattcaaag-tttgtacaatattttgcc 916315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 32754259 - 32754305
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  32754259 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 32754305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 42617825 - 42617767
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttt 72  Q
    |||| ||| |||||||||||||||| ||| ||||||||||||||||  |||||| ||||    
T  42617825 agacgccatcaaaaaataataaatttaaatttttgtacaatattttatcaaacaacttt 42617767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 44541140 - 44541194
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac 95  Q
    |||||||| |||||||||||||||||| |||| |||   ||||||||||||||||    
T  44541140 aagttttggacaatattttgccaaacaactttcaacctcaaaataactttaaaac 44541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 46088672 - 46088609
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 212  Q
    ||||||||||||||| ||||||||||||||||| ||||       ||||| |||||||||||||    
T  46088672 ctttattttaactttattttaaagtagcttttacaccgaaaataagtctggtcaaacggtacct 46088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 52464928 - 52464882
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  52464928 cttaaaggtctttattttaactttgttttcaagtaacttttagaccg 52464882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 20849354 - 20849317
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  20849354 ctttattttaacttttttttaaagtaacttttagaccg 20849317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 183
Target Start/End: Complemental strand, 47670486 - 47670453
Alignment:
Q  150 tttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||||||||| |||||||||||    
T  47670486 tttattttaactttgttttaaaatagcttttaga 47670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 12996772 - 12996731
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||||||||  ||||||||| |||||||||||    
T  12996772 cttaaagagctttattttaac--tgttttaaaatagcttttaga 12996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 20996295 - 20996251
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||    
T  20996295 ttaaagtgctttattttaactttattttaaagtaatttttagacc 20996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 32754151 - 32754222
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || ||||||||||||| ||||||||||||| ||||||   ||||||| |||| || ||||||||||    
T  32754151 aaaaaaaaaaaaattcaaagttt-gtacaatattttgtcaaacaatatttaacttaaaagtagctttaaaact 32754222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 25700 - 25869
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  25700 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 25798  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  25799 aaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 25869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 5e-48; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 7833538 - 7833705
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||            |||||    
T  7833538 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact---aaaaaaaaataaag 7833634  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7833635 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7833705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 17585508 - 17585675
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  17585508 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 17585604  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17585605 aaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 17585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 38802300 - 38802464
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  38802300 acaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 38802396  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  38802397 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 38802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 43120861 - 43120693
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||             |||||    
T  43120861 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac--aaaaaaaaaaataaag 43120764  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43120763 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 9574854 - 9575021
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||            |||||    
T  9574854 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 9574950  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  9574951 aaaccaaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 9575021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 25659892 - 25659724
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||     
T  25659892 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaataaaataaat 25659795  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  25659794 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 25659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33373902 - 33373735
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  33373902 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 33373806  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33373805 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 33373735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33895299 - 33895131
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  33895299 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 33895202  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  33895201 aaaccaaacagctttaatc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 39327125 - 39326959
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  39327125 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 39327030  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||| ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  39327029 aaaccaaacaactttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 39326959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 41901782 - 41901614
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  41901782 agacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 41901685  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  41901684 aaaccaaacagctttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41901614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 46588173 - 46587978
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  46588173 agacaccaccaaaaaataataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 46588078  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtaccta 213  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||       ||||| ||||||||||||||    
T  46588077 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttagagtagcttttagaccgaaaaaaagtctggtcaaacggtaccta 46587980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 3265109 - 3265276
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  3265109 agacaccaccaaaaaataataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 3265205  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  3265206 aaaccaaacagctttagcc--tttttcttaaagaactttattttaactttgttttagagtagcttttagaccg 3265276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 11583149 - 11583314
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  11583149 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 11583244  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| |||       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  11583245 aaaccaaacagctttggcc--tttttcttaaagagctttattttaa-tttgttttaaagtagcttttagaccg 11583314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 33642603 - 33642770
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||     
T  33642603 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa- 33642699  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  33642700 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33642770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 40432285 - 40432113
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta--aaactnnnnnnnnnnnntaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | |            |||    
T  40432285 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttattagaattaaaaaaaaaaataa 40432186  T
Q  112 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  40432185 agaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 11754308 - 11754146
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||| |    
T  11754308 acaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagta 11754212  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  11754211 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttaga 11754146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 45104173 - 45104337
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  45104173 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 45104269  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||| ||||| ||       |||||||||||||||||||||||||||| |||||||||||||||    
T  45104270 aaaccaaacaactttaacc--tttttcttaaagagctttattttaactttgtttaaaagtagcttttaga 45104337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 14487402 - 14487239
Alignment:
Q  18 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaac 117  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||            |||| ||||    
T  14487402 accaccaaaaaataataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaaaaaac 14487306  T
Q  118 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  14487305 caaacagctttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttaaaccg 14487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33894169 - 33894008
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  33894169 agacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaattaaag 33894072  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||           |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33894071 aaaccaaacagcttt---------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33894008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 47037213 - 47037045
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  47037213 agacgccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 47037115  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||||||||| ||       |||||| ||||||||||||||||||||||||||||||||||||||||    
T  47037114 aaatcaaacagctttaacc--tttttcttaaa-agctttattttaactttgttttaaagtagcttttagaccg 47037045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 36165603 - 36165435
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||            |||||    
T  36165603 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 36165505  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||| ||||||||       |||||| ||||||||||||||||| ||||||| |||||||||||||    
T  36165504 aaaccaaacaactttagcc--tttttcttaaaaagctttattttaactttattttaaaatagcttttagacc 36165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33832007 - 33831845
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||             ||||    
T  33832007 agacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaatta-aaag 33831909  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||           |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33831908 aaaccaaacagcttt---------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33831845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33818176 - 33818010
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||     
T  33818176 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaaa 33818081  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||| |||||| |       |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33818080 aaatcaaacaactttagtc--tttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33818010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 33877644 - 33877478
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||     
T  33877644 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaaa 33877549  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||| |||||| |       |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33877548 aaatcaaacaactttagtc--tttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 17249027 - 17249195
Alignment:
Q  14 agacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||            ||||    
T  17249027 agacaccaccaaaaaaataataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact---gaaaaaaaataaa 17249123  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17249124 gaaaccaaacagctttagcc--tttttcttaaagggctttattttaactttgttttaaagtagcttttacaccg 17249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 43123042 - 43123193
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  43123042 aaaaaataa-aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 43123136  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    ||||| |||        |||||| ||||||||||||||||||||||||||||||||||    
T  43123137 gcttttgccttttttt-ttaaagggctttattttaactttgttttaaagtagctttta 43123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 46040568 - 46040486
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46040568 gacaccaccaaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 43119186 - 43119032
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  43119186 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaattaaagaaaccaaaca 43119090  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    | |||| |        ||||||||| |||||||||| |||||||||||||||||||||||    
T  43119089 gttttaac--ttttttcttaaagagttttattttaattttgttttaaagtagcttttaga 43119032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 24473623 - 24473551
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  24473623 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 36952796 - 36952718
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  36952796 agacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattta 36952718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 31638496 - 31638331
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||  ||| | ||            ||||||    
T  31638496 gacaccacaaaaaaataattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataaagttagagct----aaaaaaaataaaga 31638401  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31638400 aaccaaacagctttagc--tttttccttaaagagctttattttatctttgttttaaagtagctttaagaccg 31638331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 16097358 - 16097502
Alignment:
Q  37 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnn 136  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||            ||||||||||||||||||| ||||        
T  16097358 ttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact-aaaaaaaaaaataaagaaaccaaacagcttcagcc--tt 16097454  T
Q  137 nnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
       |||||||  ||||||||||||||||||||||||||||||||||||    
T  16097455 tatcttaaaggactttattttaactttgttttaaagtagcttttagac 16097502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 31215907 - 31215782
Alignment:
Q  53 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 152  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       |||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacagctttagcctttgt--cttaaagagcttt 31215813  T
Q  153 attttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||||||||||||||||||    
T  31215812 attttaactttgttttaaagtagcttttaga 31215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 31221662 - 31221537
Alignment:
Q  53 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 152  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       |||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacagctttagcctttgt--cttaaagagcttt 31221568  T
Q  153 attttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||||||||||||||||||    
T  31221567 attttaactttgttttaaagtagcttttaga 31221537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 39879223 - 39879140
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  39879223 agacaccaccaaaaaaataataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 18091268 - 18091348
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  18091268 gacaccataaaaaaataataaattcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 1322608 - 1322525
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||    
T  1322608 agacaccaccaaaaaaataataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 23730376 - 23730210
Alignment:
Q  15 gacaccaccaaaaaat-aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt-aaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||  ||||| |||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||||            ||||    
T  23730376 gacaccaccaaaaaagcaataatttcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttcaaaact---aaaaaacaataaa 23730281  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||||||        ||||||||||||||||||||||||| |||||||||||||||||||||    
T  23730280 gaaaccaaacaactttagc--ttattccttaaagagctttattttaactttg-tttaaagtagcttttagaccg 23730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 184
Target Start/End: Complemental strand, 17366411 - 17366271
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnn 137  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| || |            ||||||||||||||| |||||  |         
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaattaaaaaaaa----taaagaaaccaaacaacttta--cttttt 17366318  T
Q  138 nncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
      |||||||||||||||||||||||||||||||||||||||||||||    
T  17366317 tccttaaagagctttattttaactttgttttaaagtagcttttagac 17366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 34652277 - 34652341
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 88  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  34652277 aaaaaataataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 34078285 - 34078352
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  34078285 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataacttta 34078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 11606534 - 11606467
Alignment:
Q  29 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| | | ||||| ||||||||||    
T  11606534 ataataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaatagctttaaaact 11606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 39729262 - 39729120
Alignment:
Q  38 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnn 137  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| || |            ||||||||||||||||||||| |          
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaattaaaaaaaa----taaagaaaccaaacagctttaactttttc 39729167  T
Q  138 nncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
       ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39729166 t--ttaaagagctttattttaattttgttttaaagtagcttttagaccg 39729120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 33933029 - 33933072
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  33933029 cttaaagaactttattttaactttgttttaaagtagcttttaga 33933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 36952673 - 36952630
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  36952673 ttaaagaactttattttaactttgttttaaagtagcttttagac 36952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 7308404 - 7308331
Alignment:
Q  24 aaaaaataataaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || |||||||||  |||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  7308404 aaaaaaaaaaaaattcaaaaattttgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 44819865 - 44819821
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  44819865 cttaaatacctttattttaactttgttttaaagtagcttttagac 44819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 45589729 - 45589773
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  45589729 cttaaagggctttattttaactttgttttaaagtaacttttagac 45589773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 28568805 - 28568754
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  28568805 tttgtacaatattttgccaaacaacatttaacttaaaaatatctttaaaact 28568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 33932911 - 33932985
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    ||||||| |||||| || ||||| |||||||||||  ||||||||||||||| ||||||| | |||||||||||||    
T  33932911 acaccacaaaaaaaaaaaaaatt-aaagttttgtatgatattttgccaaacaacttttaatttaaaaataacttta 33932985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 34652388 - 34652431
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  34652388 ttaaagaactttattttaactttgttttaaagtagtttttagac 34652431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 43124356 - 43124419
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataac 87  Q
    ||||||||| ||||||||| |||| || ||||||||||||||||  |||||||| |||||||||    
T  43124356 aaaaaataaaaaattcaaatttttatataatattttgccaaacaaattttaacttaaaaataac 43124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 46040448 - 46040405
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  46040448 cttaaagggctttattttaactttgttttaaaatagcttttaga 46040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16033054 - 16033008
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  16033054 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 16033008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 39879102 - 39879056
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||    
T  39879102 cttaaagagttttattttaactttgttttaaagtaatttttagaccg 39879056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 17670009 - 17670058
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||||||||||||| | ||||||| |||| |||||||||||    
T  17670009 tttgtacaatattttgccaaacaacatttaacttaaaagtaactttaaaa 17670058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 40648535 - 40648494
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  40648535 cttaaagagctttatttgaactttgttttaaaggagctttta 40648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 44065502 - 44065442
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| ||||| | || |||||||    
T  44065502 attcaaagctttgtacaatattgtgccaaacaacttttaacttaaaaaaagctgtaaaact 44065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 49223163 - 49223222
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||| |||||| | ||||||| ||||||| ||||||||    
T  49223163 aaattcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaaatagctttaaaa 49223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 49571314 - 49571357
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  49571314 cttaaagagctttattttaact---ttttaaagtagcttttagaccg 49571357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 12247728 - 12247685
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  12247728 cttaaaggcctttattttaactttgttttaaagtaacttttaga 12247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 23910965 - 23910914
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  23910965 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 23910914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 186
Target Start/End: Original strand, 34078401 - 34078440
Alignment:
Q  147 agctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  34078401 agctttattttaacttcattttaaagtagcttttagaccg 34078440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 28568717 - 28568671
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  28568717 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 28568671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 36680039 - 36680085
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||||||||||||||||| || || |||||||||||    
T  36680039 cttaaagacctttattttaactttgttttgaattaacttttagaccg 36680085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 174
Target Start/End: Original strand, 43808845 - 43808879
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagta 174  Q
    ||||||||| |||||||||||||||||||||||||    
T  43808845 cttaaagagttttattttaactttgttttaaagta 43808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 17670106 - 17670143
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  17670106 ctttattttaactttgttttgaagtaacttttagaccg 17670143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 18091391 - 18091436
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||  |||||||||||||||||||| || |||||||||||||    
T  18091391 cttaaaggcctttattttaactttgttttgaactagcttttagacc 18091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 5542119 - 5542163
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||| ||| |||||||||||||||||||| ||||| |||||||||    
T  5542119 cttagagacctttattttaactttgttttgaagtaacttttagac 5542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 49223271 - 49223307
Alignment:
Q  150 tttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  49223271 tttattttaactttgttttgaagtaacttttagaccg 49223307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 1466 - 1632
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  1466 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 1562  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  1563 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 27031311 - 27031149
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  27031311 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaag 27031213  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttt 179  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  27031212 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttt 27031149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 12907906 - 12908069
Alignment:
Q  18 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaac 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||    
T  12907906 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaac 12908002  T
Q  118 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  12908003 caaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 12908069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 29448799 - 29448631
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  29448799 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 29448702  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29448701 aaaccaaacagctttaacc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 29448631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 38045648 - 38045815
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  38045648 agacaccaccaaaaaataataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 38045744  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  38045745 aaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 38045815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 40239979 - 40239811
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  40239979 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--acaaaaaaaataaag 40239882  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| |||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  40239881 aaaccaaacagttttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 40789170 - 40789366
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  40789170 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataact---aaaaaaaaataaag 40789266  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtaccta 213  Q
    |||||||||||||||| ||       |||||||| ||||||||||||||||||||||||| ||||||||||||       ||||| ||||||||||||||    
T  40789267 aaaccaaacagctttaacc--tttttcttaaagaactttattttaactttgttttaaagttgcttttagaccgaaaaaaagtctggtcaaacggtaccta 40789364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 18956380 - 18956216
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  18956380 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaag 18956285  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||    
T  18956284 aaaccaaacagctttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagac 18956216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 10999103 - 10999271
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             ||||    
T  10999103 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaata--aaag 10999200  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||| |||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10999201 aaaccaaacagctttggcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 10999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 32960878 - 32960712
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  32960878 agacactatcaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 32960782  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
    |||||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||||||    
T  32960781 aaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagacc 32960712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 37669349 - 37669184
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |            ||||||     
T  37669349 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaatt---aaaaaaaaataaagat 37669253  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37669252 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37669184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 43156185 - 43156349
Alignment:
Q  16 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  43156185 acaccaccaaaaaataataa-ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 43156280  T
Q  116 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43156281 accaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43156349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 14 - 212
Target Start/End: Original strand, 17278145 - 17278340
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             |||     
T  17278145 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaa-aaaa 17278243  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 212  Q
    ||| ||||||||||| |||       ||||||||||||||||| |||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  17278244 aaatcaaacagctttggcc--tttttcttaaagagctttatttcaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 17278340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 41426954 - 41427120
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  41426954 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaag 41427050  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||| |        ||||||||  |||||||||||||||||||||||||||||||||||||    
T  41427051 aaaccaaacagctttaac--ttttttcttaaaga-atttattttaactttgttttaaagtagcttttagaccg 41427120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 23639497 - 23639333
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |             ||||    
T  23639497 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaaaa---aaag 23639401  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||| |||||    
T  23639400 aaaccaaacaactttagcc--tttttcttaaagaactttattttaactttgttttaaagtagctcttaga 23639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 1448091 - 1448258
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||            |||||    
T  1448091 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact---aaaaaaaaataaag 1448187  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||| |||||       || |||||| |||||||||||||||||||||| ||||||||| ||||    
T  1448188 aaaccaaacagctctagcc--tttttctgaaagagatttattttaactttgttttaaaatagcttttaaaccg 1448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 45620640 - 45620717
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45620640 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataacttta 45620717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 4408118 - 4407957
Alignment:
Q  14 agacaccaccaaaaa-ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||             |||    
T  4408118 agacaccaccaaaaagataataaattcaaagttta-tacaatattttgccaaacagcttttaacttaaaaataactttaaaactaaaaa--------aaa 4408028  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
     ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  4408027 taaaccaaacagctttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 4407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 41343392 - 41343235
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||            ||||||||| |||||    
T  41343392 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact---aaaacaaaataaagaaacaaaaca 41343296  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
     |||||||        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41343295 actttagc--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 41343235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 4400148 - 4399981
Alignment:
Q  14 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||            ||||    
T  4400148 agacaccaccaaaaaaatattaaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact----gaaaaaaataaa 4400053  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||| ||||| |        ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4400052 gaaaccaaacaactttaac--ttttttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 4399981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 4406709 - 4406541
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 113  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||  ||||            |||||    
T  4406709 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaact--aaaaaaaaaataaag 4406612  T
Q  114 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||| |||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  4406611 aaaacaaacaactttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 4406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 20482280 - 20482352
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||    
T  20482280 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 4615384 - 4615454
Alignment:
Q  16 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 85  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4615384 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 44651955 - 44651882
Alignment:
Q  23 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||    
T  44651955 caaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 47840722 - 47840803
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||||    
T  47840722 gacaccataaaaaaatactaaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 6607088 - 6607169
Alignment:
Q  16 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| |||| ||||    
T  6607088 acaccaccaaaaaaataataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 21134436 - 21134356
Alignment:
Q  15 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| |||||||| || |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  21134436 gacaccgccaaaaaaaaaaaaat-caaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 186
Target Start/End: Complemental strand, 40036083 - 40035944
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnn 139  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||            |||||||| ||||||||||||  |           
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaact-----ataaaaataaagaaatcaaacagcttta--cctttttt 40035991  T
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  40035990 cttaaagagttttattttaactttattttaaagtagcttttagaccg 40035944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 36769226 - 36769298
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||||| ||||    
T  36769226 aaaaaataataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 4404295 - 4404447
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||  | |||| ||||            |||||||||||||||    
T  4404295 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa--attttagaactaaaaaaaa----taaagaaaccaaaca 4404388  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| |        |||||| | ||||||||||||||||||||||||||||||||||||    
T  4404389 gctttaac--tttttccttaaataactttattttaactttgttttaaagtagcttttagac 4404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 4492506 - 4492356
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||| ||| ||||            ||||||| |||||||    
T  4492506 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaa-tttaaaataaccttagaact----aaaaaaaataaagaatccaaaca 4492412  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 181  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  4492411 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 184
Target Start/End: Original strand, 5483406 - 5483562
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||| || ||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||             |||||||||||||||    
T  5483406 aaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac--aaaaaaaaatataaagaaaccaaaca 5483503  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    |||||| |        ||| ||||| |||||||||||||||||||||||||||||||||||    
T  5483504 gctttaac--tttttcctttaagagttttattttaactttgttttaaagtagcttttagac 5483562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 5526108 - 5526177
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||| ||||    
T  5526108 aaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 20135158 - 20135099
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagctttt 73  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  20135158 gacaccaccaaaaaaatattaaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16933447 - 16933401
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16933447 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 16933401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 16938830 - 16938784
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16938830 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 16938784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 3840021 - 3840090
Alignment:
Q  27 aaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| || ||||||||||||||||||||||||| |||||| ||||||||| ||||||| || |||||||    
T  3840021 aaatattagattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaatagctgtaaaact 3840090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 183
Target Start/End: Complemental strand, 20135077 - 20135005
Alignment:
Q  109 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||    
T  20135077 taaagaaaccaaacagctttagc--ttttttcttaaagggctttattttaactttgttttaaagtagcttttaga 20135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 43111035 - 43111076
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaa 65  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43111035 aaaaaataataaattcaaagttttgtacaatattttgccaaa 43111076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 43111100 - 43111175
Alignment:
Q  109 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||| |||||||||||||||||||       |||||||||||||||||||| |||||||| |||||||||||||||||    
T  43111100 taaaaaaaccaaacagctttagccttttt--cttaaagagctttattttaattttgttttgaagtagcttttagaccg 43111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 23154632 - 23154789
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaacca 119  Q
    ||||| |||| || ||| ||| |||||||||||||||||||||||||| |||||||||  |||||||||||| ||||            |||||||||||    
T  23154632 caccacaaaaaaaaaaaatcatagttttgtacaatattttgccaaacaacttttaact-taaaataactttagaact----aaaaaaaataaagaaacca 23154726  T
Q  120 aacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 184  Q
    ||| |||||| |        |||||| | ||||||||||||||||||||||||||||||||||||    
T  23154727 aacggctttaac--tttttccttaaataactttattttaactttgttttaaagtagcttttagac 23154789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 36765688 - 36765734
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  36765688 cttaaagaactttattttaactttgttttaaaatagcttttagaccg 36765734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 44651839 - 44651793
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  44651839 cttaaagggctttattttaactttgttttaaagtaacttttagaccg 44651793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 19036402 - 19036360
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  19036402 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 19036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 20718234 - 20718276
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20718234 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 20718276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 29488481 - 29488523
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  29488481 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 29488523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 33232697 - 33232655
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  33232697 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 33232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 34284839 - 34284797
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  34284839 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 34284797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 42915378 - 42915429
Alignment:
Q  45 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  42915378 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 42915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 16933550 - 16933500
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  16933550 acaccaccaaaaaaataataaattcaatgttttgtacaatattttgtcaaa 16933500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 16938933 - 16938883
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 65  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  16938933 acaccaccaaaaaaataataaattcaatgttttgtacaatattttgtcaaa 16938883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 37143542 - 37143584
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttaga 183  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  37143542 ttaaagagttttattttaactttattttaaagtagcttttaga 37143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 38049198 - 38049152
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  38049198 cttaaagagctttattttaactttgttttaaattaggttttataccg 38049152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 38049299 - 38049237
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| |||||| ||||||||||||| ||||||| ||||||| | |||||||| |||||||||    
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaact 38049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 42828845 - 42828799
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  42828845 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 42828799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 4616173 - 4616218
Alignment:
Q  141 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  4616173 ttaaagagctttattttaattttgttttaaagtattttttagaccg 4616218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 5526226 - 5526259
Alignment:
Q  150 tttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||||||||||||||||||||||||    
T  5526226 tttattttaactttgttttaaagtagcttttaga 5526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 17816601 - 17816661
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  17816601 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 17816661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 19050400 - 19050340
Alignment:
Q  35 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  19050400 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 19050340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 36769344 - 36769381
Alignment:
Q  147 agctttattttaactttgttttaaagtagcttttagac 184  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36769344 agctttattttaactttgttttaaaatagcttttagac 36769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 3840137 - 3840169
Alignment:
Q  149 ctttattttaactttgttttaaagtagctttta 181  Q
    |||||||||||||||||||||||||||||||||    
T  3840137 ctttattttaactttgttttaaagtagctttta 3840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  40 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||  ||||||| |||||| ||||||||| ||||||||||||| ||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 20482404 - 20482435
Alignment:
Q  149 ctttattttaactttgttttaaagtagctttt 180  Q
    ||||||||||||||||||||||||||||||||    
T  20482404 ctttattttaactttgttttaaagtagctttt 20482435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 20762915 - 20762957
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 67  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  20762915 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 20762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 15641229 - 15641275
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  15641229 cttaaagaactttattgtaactttgtattaaaatagcttttagaccg 15641275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 44
Target Start/End: Complemental strand, 19758190 - 19758160
Alignment:
Q  14 agacaccaccaaaaaataataaattcaaagt 44  Q
    |||||||||||||||||||||||||||||||    
T  19758190 agacaccaccaaaaaataataaattcaaagt 19758160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 47171750 - 47171796
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  47171750 cttaaaggtctttattttaactttgttttgaagtaacttttagaccg 47171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 42828956 - 42828881
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| |||| || ||| ||||||||| ||||||||||||| |||||| | ||||||| |||| || ||||||||||    
T  42828956 caccataaaaaaaaaaaatcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaagtagctttaaaact 42828881  T

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Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 42915466 - 42915506
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagctttt 180  Q
    |||||||| |||||||||||||||||||| ||||| |||||    
T  42915466 cttaaagacctttattttaactttgttttgaagtaactttt 42915506  T

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Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 42995355 - 42995414
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  42995355 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 42995414  T

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Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 47840841 - 47840881
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagctttt 180  Q
    |||||| ||||||||||||||||||| ||||||||| ||||    
T  47840841 cttaaatagctttattttaactttgtcttaaagtagttttt 47840881  T

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Target: scaffold0178 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 7364 - 7204
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||             ||| ||||||||||    
T  7364 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaactaaaaaaaaaaaaaaaaaaaaccaaaca 7265  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7264 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7204  T

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Target: scaffold0024 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 90542 - 90374
Alignment:
Q  16 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |            ||||||    
T  90542 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa-ttaaaaaaataaataaaga 90444  T
Q  115 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||        ||||||   |||||||||||||||||||||||||||||||||||||    
T  90443 aaccaaacagctttagcctttttt--ttaaaggattttattttaactttgttttaaagtagcttttagaccg 90374  T

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Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 186
Target Start/End: Complemental strand, 110600 - 110442
Alignment:
Q  23 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaac 122  Q
    ||||||| || ||| |||||||||  ||||||||||||| ||||| ||||||||| ||||||||||||| || |            |||||||| |||||    
T  110600 caaaaaaaaaaaaaatcaaagtttcttacaatattttgctaaacaacttttaacttaaaaataactttagaagt---aaaaaaaaataaagaaaacaaac 110504  T
Q  123 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||         ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  110503 agctttagc--tttttcgttaaagaactttattttaactttgttttaaagtagcttttaaaccg 110442  T

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Target: scaffold0198 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 15333 - 15174
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  15333 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 15237  T
Q  124 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||           ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15236 gctttaattttttttttttaaaaagctttattttaactttgttttaaagtagcttttagaccg 15174  T

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Target: scaffold0244 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 7656 - 7574
Alignment:
Q  15 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  7656 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

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Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 7527 - 7493
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttaga 183  Q
    ||||||||||||||||||||||| |||||||||||    
T  7527 ctttattttaactttgttttaaaatagcttttaga 7493  T

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Target: scaffold0768 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 6375 - 6308
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6375 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataatttta 6308  T

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Target: scaffold0020 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 132648 - 132817
Alignment:
Q  14 agacaccaccaaaaa-ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 112  Q
    |||||| |||||||| |||||||||| |||||||  ||||||||||||||||||| ||||||| | ||||||||||||| ||||             |||    
T  132648 agacacaaccaaaaagataataaattgaaagttta-tacaatattttgccaaacaacttttaaattaaaaataactttagaactaaaaaaaaataaaaaa 132746  T
Q  113 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 185  Q
     ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  132747 taaaccaaacagctttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 132817  T

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Target: scaffold0003 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 229101 - 229156
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 229156  T

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Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 229195 - 229241
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  229195 cttaaaggactttattttaactttgttttaaaggagcttttagaccg 229241  T

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Target: scaffold1793 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 228 - 182
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  228 cttaaagagctttattttaactttgttttaaagtaacttttagaccg 182  T

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Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 1072 - 1127
Alignment:
Q  41 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  1072 aagttttgaaaaatattttgccaaacaacttttaacttaaaaataactttaaaact 1127  T

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Target: scaffold0318; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 1174 - 1247
Alignment:
Q  149 ctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatatgttt 222  Q
    |||||||||||||||||||||||  |||||||||||||       ||||| |||||||||||||||||| ||||    
T  1174 ctttattttaactttgttttaaaagagcttttagaccgtaaaaaagtctggtcaaacggtacctaaataagttt 1247  T

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Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 138101 - 138034
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 91  Q
    |||||| || ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  138101 aaaaaaaaaaaaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataacttta 138034  T

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Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 137990 - 137944
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  137990 cttaaagagctttattttaactttgttttaaagtaatttttagaccg 137944  T

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Target: scaffold1822 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 356 - 402
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  356 cttaaagagttttattttaactttgttttaaagtaacttttagaccg 402  T

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Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 5793 - 5732
Alignment:
Q  36 attcaaagttttgtacaatattttgccaaacagcttttaactcaa-aaataactttaaaact 96  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| || ||||||||||||||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactttaaaact 5732  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 31633 - 31572
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  31633 aaattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 31572  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 156640 - 156569
Alignment:
Q  24 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    |||||| || ||| ||||||||| |||||||||||||||||||| | ||||||| ||| ||| ||||||||||    
T  156640 aaaaaaaaaaaaaatcaaagttt-gtacaatattttgccaaacaacatttaacttaaacatatctttaaaact 156569  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 99491 - 99537
Alignment:
Q  140 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 186  Q
    |||||||| |||||||||||||||||||| || || |||||||||||    
T  99491 cttaaagacctttattttaactttgttttgaaataacttttagaccg 99537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 236 - 295
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  236 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 295  T

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Target: scaffold0095; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 1726 - 1785
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  1726 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 55458 - 55399
Alignment:
Q  34 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 94  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  55458 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 55399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 50244 - 50319
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| |||| || ||| ||||||||| ||||||||||||| |||||| | ||||| | ||||||| ||||||||||    
T  50244 caccataaaaaaaaaaaatcaaagttt-gtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 50319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 57777 - 57852
Alignment:
Q  20 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 96  Q
    ||||| |||| || ||| ||||||||| ||||||||||||| |||||| | ||||| | ||||||| ||||||||||    
T  57777 caccataaaaaaaaaaaatcaaagttt-gtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 57852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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