View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10929_high_6 (Length: 258)
Name: NF10929_high_6
Description: NF10929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10929_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 452133 - 451904
Alignment:
| Q |
16 |
gtgaggttagcatgcttcatggtgacacaagatgaaagtggaactgaagcttcacggtgaaaagaattgattaatgtaagtgtcattttttct-ctccat |
114 |
Q |
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| T |
452133 |
gtgaggttagcatgcttcatggtgacacaagatgaaagtggaactgaagcttcacggtgaaaagaattgattaatgtaagtgtcatttttttttctccat |
452034 |
T |
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| Q |
115 |
atatccctcttcagttcttacattaatctttaatattgtagggtattgttcaattttaataaaatttggttcatattttatttatctttcgtaacccttt |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
452033 |
atatccctcttcagttcttacattaatctttaatattgtagggtattgttcaattttaataaaatttggttcatattttatttatctttcgtaaccc-tt |
451935 |
T |
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| Q |
215 |
tnnnnnnnctaaatattttggtagaccctct |
245 |
Q |
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| T |
451934 |
taaaaaaactaaatattttggtagaccctct |
451904 |
T |
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