View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10931_low_12 (Length: 374)

Name: NF10931_low_12
Description: NF10931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10931_low_12
NF10931_low_12
[»] chr3 (40 HSPs)
chr3 (35-364)||(2029226-2029556)
chr3 (240-322)||(47219168-47219250)
chr3 (210-322)||(29135906-29136019)
chr3 (210-322)||(51060282-51060395)
chr3 (258-322)||(49021204-49021268)
chr3 (228-291)||(3755582-3755645)
chr3 (239-322)||(54237471-54237554)
chr3 (212-322)||(54261221-54261332)
chr3 (233-295)||(34662347-34662409)
chr3 (260-322)||(45877498-45877560)
chr3 (236-311)||(11249759-11249834)
chr3 (1-39)||(2029572-2029610)
chr3 (228-322)||(26361968-26362062)
chr3 (228-322)||(28572212-28572306)
chr3 (210-299)||(49198344-49198434)
chr3 (262-324)||(53649773-53649835)
chr3 (210-322)||(3136695-3136807)
chr3 (276-321)||(50682525-50682570)
chr3 (258-322)||(25295002-25295066)
chr3 (258-322)||(29762156-29762220)
chr3 (236-303)||(3763070-3763137)
chr3 (239-322)||(29127942-29128025)
chr3 (232-322)||(7650243-7650333)
chr3 (210-323)||(40660327-40660441)
chr3 (228-322)||(47471844-47471937)
chr3 (238-307)||(33251684-33251753)
chr3 (212-307)||(30045816-30045912)
chr3 (273-324)||(11393474-11393525)
chr3 (256-311)||(24146340-24146395)
chr3 (228-291)||(47303521-47303584)
chr3 (212-322)||(48342015-48342126)
chr3 (258-324)||(3507532-3507598)
chr3 (228-322)||(7328856-7328949)
chr3 (236-322)||(22909803-22909889)
chr3 (239-324)||(6462435-6462520)
chr3 (211-295)||(8362571-8362656)
chr3 (210-322)||(15320179-15320292)
chr3 (258-323)||(50405603-50405668)
chr3 (210-289)||(42412808-42412888)
chr3 (258-322)||(47749106-47749170)
[»] chr1 (42 HSPs)
chr1 (210-322)||(41663857-41663970)
chr1 (228-322)||(26325825-26325919)
chr1 (210-322)||(49078108-49078221)
chr1 (211-322)||(9659180-9659291)
chr1 (234-322)||(10422807-10422895)
chr1 (240-322)||(5504056-5504138)
chr1 (233-311)||(14254280-14254358)
chr1 (229-322)||(8764005-8764098)
chr1 (239-300)||(13262107-13262168)
chr1 (211-322)||(5855517-5855629)
chr1 (231-311)||(10507714-10507794)
chr1 (238-322)||(11397890-11397974)
chr1 (238-322)||(26660161-26660244)
chr1 (232-322)||(16263562-16263652)
chr1 (228-322)||(17642005-17642099)
chr1 (228-322)||(33498840-33498934)
chr1 (210-322)||(43959822-43959935)
chr1 (238-318)||(50094927-50095007)
chr1 (228-291)||(32884-32947)
chr1 (212-322)||(10172972-10173083)
chr1 (247-297)||(35908790-35908840)
chr1 (228-322)||(45361883-45361977)
chr1 (210-322)||(18915861-18915974)
chr1 (258-322)||(4581683-4581747)
chr1 (238-322)||(16150683-16150767)
chr1 (236-312)||(48761197-48761273)
chr1 (275-322)||(34878626-34878673)
chr1 (228-295)||(45726461-45726528)
chr1 (210-288)||(48798105-48798184)
chr1 (240-322)||(14357780-14357862)
chr1 (228-322)||(21849206-21849299)
chr1 (210-311)||(33418127-33418229)
chr1 (256-322)||(35211173-35211239)
chr1 (273-322)||(892303-892352)
chr1 (210-322)||(33004016-33004129)
chr1 (277-322)||(45536784-45536829)
chr1 (273-322)||(51437515-51437564)
chr1 (267-311)||(1764209-1764253)
chr1 (233-301)||(10336534-10336602)
chr1 (233-289)||(12744557-12744613)
chr1 (233-289)||(12755547-12755603)
chr1 (238-322)||(34697358-34697442)
[»] chr4 (43 HSPs)
chr4 (238-324)||(40780859-40780945)
chr4 (210-322)||(29895785-29895898)
chr4 (228-322)||(16450317-16450411)
chr4 (210-322)||(53599058-53599171)
chr4 (210-322)||(55921032-55921145)
chr4 (212-322)||(43458613-43458724)
chr4 (232-322)||(4738639-4738729)
chr4 (228-322)||(38166044-38166138)
chr4 (228-322)||(42722577-42722671)
chr4 (210-322)||(36145215-36145328)
chr4 (210-322)||(43468345-43468458)
chr4 (238-322)||(7246646-7246730)
chr4 (258-318)||(8064802-8064862)
chr4 (210-317)||(8889020-8889128)
chr4 (210-296)||(1446824-1446911)
chr4 (212-322)||(2559307-2559418)
chr4 (228-322)||(29588753-29588847)
chr4 (228-318)||(49260669-49260759)
chr4 (238-311)||(46108718-46108791)
chr4 (210-322)||(47078456-47078569)
chr4 (240-324)||(26237420-26237504)
chr4 (260-323)||(6032642-6032705)
chr4 (233-324)||(14859313-14859404)
chr4 (259-322)||(38841368-38841431)
chr4 (212-322)||(52950082-52950193)
chr4 (228-322)||(14124033-14124127)
chr4 (239-301)||(20354665-20354727)
chr4 (229-322)||(17080061-17080154)
chr4 (246-311)||(54946284-54946349)
chr4 (210-321)||(295534-295645)
chr4 (258-322)||(14858757-14858821)
chr4 (232-312)||(20532419-20532499)
chr4 (238-322)||(47682382-47682466)
chr4 (265-324)||(13552156-13552215)
chr4 (243-322)||(15839935-15840014)
chr4 (240-322)||(49952145-49952228)
chr4 (228-320)||(1940779-1940868)
chr4 (240-322)||(24166479-24166561)
chr4 (233-311)||(48317286-48317364)
chr4 (240-322)||(55703752-55703834)
chr4 (273-322)||(42722379-42722428)
chr4 (258-322)||(14567286-14567350)
chr4 (239-311)||(50485971-50486043)
[»] chr7 (34 HSPs)
chr7 (210-322)||(38578867-38578980)
chr7 (210-322)||(48804679-48804792)
chr7 (211-322)||(17748382-17748494)
chr7 (232-322)||(4195202-4195292)
chr7 (258-322)||(48551902-48551966)
chr7 (210-322)||(10047876-10047989)
chr7 (238-311)||(20247181-20247254)
chr7 (237-317)||(4228759-4228839)
chr7 (238-322)||(37514946-37515030)
chr7 (212-322)||(43861972-43862083)
chr7 (228-322)||(47341891-47341985)
chr7 (210-318)||(13095854-13095963)
chr7 (258-322)||(41945518-41945582)
chr7 (240-322)||(3353451-3353533)
chr7 (228-322)||(29151955-29152049)
chr7 (258-299)||(24983442-24983483)
chr7 (229-322)||(28744178-28744271)
chr7 (238-295)||(39474965-39475022)
chr7 (259-299)||(36619277-36619317)
chr7 (238-318)||(39420862-39420942)
chr7 (254-322)||(44961638-44961706)
chr7 (265-324)||(9685779-9685838)
chr7 (228-318)||(1797475-1797565)
chr7 (232-322)||(5069815-5069905)
chr7 (210-299)||(16802119-16802209)
chr7 (210-322)||(22993367-22993480)
chr7 (238-279)||(29805483-29805524)
chr7 (210-322)||(34659222-34659335)
chr7 (258-322)||(3603402-3603466)
chr7 (210-321)||(18785665-18785777)
chr7 (258-322)||(22573857-22573921)
chr7 (211-322)||(22973964-22974076)
chr7 (212-323)||(27875087-27875199)
chr7 (228-316)||(28396166-28396254)
[»] chr6 (28 HSPs)
chr6 (210-322)||(21898645-21898758)
chr6 (210-322)||(8932658-8932771)
chr6 (210-322)||(8944124-8944237)
chr6 (259-322)||(14783420-14783483)
chr6 (260-322)||(6606097-6606159)
chr6 (260-318)||(17114901-17114959)
chr6 (210-322)||(5253223-5253336)
chr6 (238-322)||(29333139-29333223)
chr6 (228-322)||(8938727-8938821)
chr6 (228-322)||(12635830-12635924)
chr6 (233-322)||(13036004-13036093)
chr6 (211-322)||(3601082-3601194)
chr6 (211-322)||(14107358-14107470)
chr6 (238-322)||(30788853-30788937)
chr6 (239-322)||(5029844-5029927)
chr6 (239-322)||(9633625-9633708)
chr6 (228-311)||(34954630-34954713)
chr6 (258-324)||(2271301-2271367)
chr6 (210-295)||(12606427-12606513)
chr6 (228-322)||(19089514-19089608)
chr6 (238-322)||(10396499-10396583)
chr6 (228-322)||(9179736-9179830)
chr6 (268-322)||(21167431-21167485)
chr6 (210-322)||(8611974-8612087)
chr6 (240-301)||(8888910-8888971)
chr6 (238-299)||(19230582-19230643)
chr6 (238-311)||(29444776-29444849)
chr6 (260-324)||(8149795-8149859)
[»] chr5 (36 HSPs)
chr5 (210-322)||(5731920-5732033)
chr5 (211-322)||(1538426-1538538)
chr5 (228-322)||(9805017-9805111)
chr5 (210-323)||(20525832-20525946)
chr5 (228-322)||(42086340-42086434)
chr5 (212-322)||(23247352-23247462)
chr5 (210-322)||(41163460-41163572)
chr5 (239-322)||(24875369-24875452)
chr5 (228-323)||(42291504-42291599)
chr5 (228-322)||(19572737-19572831)
chr5 (228-322)||(23383670-23383764)
chr5 (241-322)||(14728109-14728190)
chr5 (238-322)||(11845801-11845885)
chr5 (211-322)||(25417183-25417295)
chr5 (258-322)||(42861218-42861282)
chr5 (273-324)||(40060342-40060393)
chr5 (236-318)||(9168257-9168339)
chr5 (210-322)||(9812866-9812979)
chr5 (258-322)||(2485239-2485303)
chr5 (211-322)||(40117410-40117522)
chr5 (258-322)||(41801020-41801084)
chr5 (259-322)||(27648425-27648488)
chr5 (260-322)||(8513564-8513626)
chr5 (228-322)||(12081921-12082015)
chr5 (233-295)||(14588644-14588706)
chr5 (268-318)||(36783296-36783346)
chr5 (260-318)||(39099783-39099841)
chr5 (228-289)||(7308397-7308458)
chr5 (210-322)||(12705008-12705121)
chr5 (238-295)||(14974351-14974408)
chr5 (228-318)||(18136280-18136374)
chr5 (273-322)||(25950594-25950643)
chr5 (265-322)||(28857196-28857253)
chr5 (210-322)||(37263235-37263347)
chr5 (233-322)||(43399146-43399235)
chr5 (258-322)||(20255412-20255476)
[»] chr2 (46 HSPs)
chr2 (211-322)||(12864218-12864330)
chr2 (210-322)||(7747267-7747380)
chr2 (210-322)||(41220628-41220741)
chr2 (258-322)||(14169609-14169673)
chr2 (228-322)||(10823072-10823166)
chr2 (228-322)||(16325607-16325701)
chr2 (228-322)||(25540404-25540498)
chr2 (260-322)||(34130302-34130364)
chr2 (210-322)||(6358151-6358264)
chr2 (258-322)||(20116612-20116676)
chr2 (238-322)||(37560195-37560279)
chr2 (228-311)||(10026627-10026710)
chr2 (212-322)||(44139479-44139590)
chr2 (228-310)||(22593147-22593228)
chr2 (210-294)||(2550861-2550946)
chr2 (247-324)||(2784963-2785040)
chr2 (233-322)||(19976807-19976896)
chr2 (233-322)||(38962780-38962869)
chr2 (238-322)||(16813165-16813249)
chr2 (238-322)||(16852444-16852528)
chr2 (211-324)||(20612532-20612648)
chr2 (212-311)||(34356201-34356301)
chr2 (275-322)||(29422274-29422321)
chr2 (239-322)||(34722703-34722786)
chr2 (259-322)||(35946781-35946844)
chr2 (236-322)||(3643887-3643973)
chr2 (240-322)||(3848914-3848996)
chr2 (236-322)||(44945613-44945699)
chr2 (210-322)||(12455303-12455416)
chr2 (228-317)||(39201513-39201602)
chr2 (258-324)||(36480436-36480499)
chr2 (259-322)||(16034980-16035043)
chr2 (238-293)||(24179590-24179645)
chr2 (238-289)||(30721888-30721939)
chr2 (210-295)||(331494-331580)
chr2 (266-324)||(1773642-1773700)
chr2 (228-322)||(8410143-8410237)
chr2 (228-318)||(10669604-10669694)
chr2 (228-322)||(11069890-11069984)
chr2 (240-318)||(25549752-25549830)
chr2 (228-322)||(27725952-27726046)
chr2 (228-322)||(38005414-38005508)
chr2 (258-311)||(10046488-10046541)
chr2 (213-289)||(18649059-18649136)
chr2 (265-318)||(34738337-34738390)
chr2 (274-322)||(44773321-44773369)
[»] chr8 (19 HSPs)
chr8 (215-323)||(4479295-4479403)
chr8 (228-322)||(43027321-43027415)
chr8 (210-322)||(2467118-2467231)
chr8 (210-322)||(10927603-10927716)
chr8 (210-322)||(45521166-45521278)
chr8 (210-295)||(6100469-6100555)
chr8 (210-322)||(14846573-14846685)
chr8 (212-324)||(15884554-15884666)
chr8 (258-322)||(993234-993298)
chr8 (216-322)||(43032904-43033011)
chr8 (228-318)||(68102-68192)
chr8 (273-323)||(3379811-3379861)
chr8 (238-295)||(22958796-22958853)
chr8 (266-311)||(26570978-26571023)
chr8 (238-322)||(8997544-8997628)
chr8 (212-299)||(9860018-9860106)
chr8 (258-318)||(18374056-18374116)
chr8 (210-269)||(34613831-34613891)
chr8 (258-294)||(36662450-36662486)
[»] scaffold0010 (1 HSPs)
scaffold0010 (228-322)||(155711-155805)
[»] scaffold0291 (1 HSPs)
scaffold0291 (210-322)||(6851-6964)
[»] scaffold0016 (1 HSPs)
scaffold0016 (228-322)||(8701-8795)
[»] scaffold0001 (1 HSPs)
scaffold0001 (238-322)||(65152-65236)
[»] scaffold0009 (1 HSPs)
scaffold0009 (239-322)||(42832-42915)
[»] scaffold0170 (1 HSPs)
scaffold0170 (214-295)||(9845-9927)
[»] scaffold0086 (1 HSPs)
scaffold0086 (232-322)||(26202-26292)
[»] scaffold0376 (1 HSPs)
scaffold0376 (210-322)||(12666-12779)
[»] scaffold0005 (2 HSPs)
scaffold0005 (228-289)||(271107-271168)
scaffold0005 (258-322)||(250025-250089)
[»] scaffold0002 (2 HSPs)
scaffold0002 (210-322)||(566-679)
scaffold0002 (238-322)||(319447-319531)
[»] scaffold0004 (1 HSPs)
scaffold0004 (240-318)||(94984-95063)
[»] scaffold0006 (1 HSPs)
scaffold0006 (228-320)||(68532-68621)
[»] scaffold0011 (1 HSPs)
scaffold0011 (265-322)||(224369-224426)
[»] scaffold0155 (1 HSPs)
scaffold0155 (228-324)||(19270-19366)
[»] scaffold0116 (1 HSPs)
scaffold0116 (275-311)||(17452-17488)
[»] scaffold0079 (1 HSPs)
scaffold0079 (282-322)||(8232-8272)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 35 - 364
Target Start/End: Complemental strand, 2029556 - 2029226
Alignment:
Q  35 ccaccgacctcactaaactttagcattccttccattatttcgtgtttcttaaagccaaattataatcttacttaacctatctttcaacaattctttatca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2029556 ccaccgacctcactaaactttagcattccttccattatttcgtctttattaaagccaaattataatcttacttaacctatctttcaacaattctttatca 2029457  T
Q  135 aatcataatttaaaccaaaacaatgtatttcaaccatttatgaccaccttcgaaatgttattagaaaattaactaccggggaataacggattc-attccc 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||  |    
T  2029456 aatcataatttaaaccaaaacaatgtatttcaaccatttatgaccaccttcgaaatgttattagaaaattaactattggggaataacgaattcgattttc 2029357  T
Q  234 aggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaacnnnnnnnnn 333  Q
    ||||| ||||||| |||||||||||||||| ||||||| |||||| |||||||||| ||||||||||| ||||| ||| | ||||||||||             
T  2029356 aggagaaacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaaaccagtgcgaaaacaaaaaaaaa 2029257  T
Q  334 nctaccaagacccatgccgcatctcttcatc 364  Q
     |||||||||||| |||||||||||||||||    
T  2029256 actaccaagacccgtgccgcatctcttcatc 2029226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 47219168 - 47219250
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||| |||| |||| |||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  47219168 aacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 47219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 29135906 - 29136019
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||||||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| |||||||||||||||| |||||||||| | ||| ||    
T  29135906 ccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtgggttgg 29136005  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| |||| |||||    
T  29136006 aaaccggtacgaaa 29136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 51060395 - 51060282
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| |||| |||| ||||||||  ||||| ||| |||||| ||||||| |||| | |||||||||||||||||||| | ||||||    
T  51060395 ccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcgg 51060296  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  51060295 aaaccggtgcgaaa 51060282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 49021268 - 49021204
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  49021268 cgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 49021204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 3755582 - 3755645
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtc 291  Q
    |||||||||||||||||||||||   ||| |||||||||||||| |||||||||||||||||||    
T  3755582 attcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtcgtc 3755645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 54237471 - 54237554
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||  ||||| ||| |||||||||||||| ||||||||||| ||||||||||||||  | ||||||||| ||||||||||    
T  54237471 gaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaa 54237554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 54261221 - 54261332
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||| ||||||||||||| ||||  ||| |||||| ||||||| |||||||||||||||||| |||| ||  | ||||||||    
T  54261221 ggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaa 54261320  T
Q  311 atcggtgcgaaa 322  Q
    | ||||||||||    
T  54261321 accggtgcgaaa 54261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 34662409 - 34662347
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    ||||||||| |||||||||| |||||||||||||||| | |||||||| ||||||||||||||    
T  34662409 caggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacc 34662347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 45877498 - 45877560
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| ||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  45877498 catgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaa 45877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 11249834 - 11249759
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||||||||||||| || |  |||||||| ||||||||||||||||||||||| ||| ||||||  ||||||||    
T  11249834 gaggaacaacgtttggataatgtgcatgtctttacgtatgagccggattagtcgttcactattgatgagtcggaaa 11249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2029610 - 2029572
Alignment:
Q  1 acaaaatcttcctcctattgaaagtatgtcttctccacc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2029610 acaaaatcttcctcctattgaaagtatgtcttctccacc 2029572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 26362062 - 26361968
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||| | ||||||||||||||| |||  ||||| ||||||| | |||||||||||||||  |||| ||||| ||||||||| ||||| ||||    
T  26362062 attcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaa 26361968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 28572306 - 28572212
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| | ||||||| ||||  |||| ||||| ||||||| | ||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  28572306 attcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 28572212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 49198344 - 49198434
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattg 299  Q
    |||||||||| ||| ||| ||||| ||| ||||||||  ||||  ||| |||||| ||||||| |||||||||||||||||||||||||||    
T  49198344 ccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattg 49198434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 53649773 - 53649835
Alignment:
Q  262 tgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||||||| |||||||||||||||||| |||| ||||| | ||||||| ||||||||||||    
T  53649773 tgtctctacgcatgagccggattagtcgttcacctttgatggatcggaaaccggtgcgaaaac 53649835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 3136807 - 3136695
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||||||| |||  |||| ||||||||  ||||  ||| |||||| ||||||| ||||| ||||||||||||||||| ||| | ||||||    
T  3136807 ccggggaataccggattcgattttcagg-ggaacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcgg 3136709  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  3136708 aaaccggtgcgaaa 3136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 50682525 - 50682570
Alignment:
Q  276 agccggattagtcgtccaccattgataggtcggaaatcggtgcgaa 321  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||    
T  50682525 agccggattagtcgtccaccattgataggttggaaaccggtgcgaa 50682570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 25295002 - 25295066
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||| | ||||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  25295002 cgcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaa 25295066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 29762220 - 29762156
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||| | |||||| |||||||||||||||||||| | ||||||||| ||||||||||    
T  29762220 cgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 29762156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 3763070 - 3763137
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgatag 303  Q
    ||||||||||| ||||| |||  ||||||||||||| | || | ||||||||||||||||||||||||    
T  3763070 gaggaacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtcgtccaccattgatag 3763137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 29127942 - 29128025
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||  ||||| ||| |||||| ||||||| ||||||||||||||||| ||||| ||| | ||||||||| || |||||||    
T  29127942 gaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaa 29128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 7650243 - 7650333
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||||||||  ||||  |||||| ||||||||||| | ||||||||||||||| ||||| ||| | ||| ||||| ||||||||||    
T  7650243 ccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 7650333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 40660441 - 40660327
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    ||||| |||| ||||||| ||||| |||||||||||| |||||| ||| |||||| ||||||| |||| |||||||| || | |||| ||| | |||||     
T  40660441 ccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcatgcctctacgcatgaaccggattaatcattcacctttggtgggtcga 40660342  T
Q  309 aaatcggtgcgaaaa 323  Q
    ||| |||||| ||||    
T  40660341 aaaccggtgcaaaaa 40660327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 47471844 - 47471937
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||| | |||| |||| ||||||  |||||| |||||||| |||||||||||||| ||| | ||||||||| || |||||||    
T  47471844 attcccagg-ggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaa 47471937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 33251684 - 33251753
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcg 307  Q
    ||||||||||||||  |||  ||||| ||||||| ||||||||||||||||||||||  ||||| |||||    
T  33251684 ggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgtccacatttgatgggtcg 33251753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 30045816 - 30045912
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcg 307  Q
    |||||||| ||| ||| ||||| ||| ||||||||| ||||  ||| |||||||||||||| | ||| | ||||||||||||||| ||||| |||||    
T  30045816 ggggaataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcg 30045912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 11393525 - 11393474
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||||| ||||||||||||||| ||||| ||||||||| || |||||||||    
T  11393525 atgagccagattagtcgtccacctttgattggtcggaaaccgatgcgaaaac 11393474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 24146395 - 24146340
Alignment:
Q  256 tacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||||| |||||   |||||||| |||||||||||||||||||| |||||||||    
T  24146395 tacgcatgcctctagacatgagccgaattagtcgtccaccattgatgggtcggaaa 24146340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 47303584 - 47303521
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtc 291  Q
    ||||||||||||||||||  ||||| ||| | |||| ||||||  |||||||||||||||||||    
T  47303584 attcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtc 47303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 48342015 - 48342126
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||| ||| ||||||||| |||| |||| |||||| ||||||| |||| || ||||||||||||| | ||| | | ||||||    
T  48342015 ggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatctttggtggatcggaa 48342114  T
Q  311 atcggtgcgaaa 322  Q
    |  |||||||||    
T  48342115 acaggtgcgaaa 48342126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 3507598 - 3507532
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||| ||||||| | |||||||||||||||  |||| ||| | ||||||||| ||||||||||||    
T  3507598 cgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaaac 3507532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 7328856 - 7328949
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  ||| |||||| || |||| ||||||||||||||||| ||||| ||| | ||||| ||| ||||||||||    
T  7328856 attcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 7328949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 22909803 - 22909889
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||| | || |||| |||||   |||||| |||||||| ||||||||| |||| ||||| ||||||||| | ||||||||    
T  22909803 gaggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaaccagtgcgaaa 22909889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 6462435 - 6462520
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||||| ||||  ||| |||||| ||||||| ||||||||||||||||| |||  |||  | ||| ||||| ||||||||||||    
T  6462435 gaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgaccattattagtgggttggaaaccggtgcgaaaac 6462520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 8362571 - 8362656
Alignment:
Q  211 cggggaataacggattca-ttcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    ||||||||| ||| |||| |||||||  | ||||||||||||  ||| |||||| ||||||| |||||||  ||||||||||||||    
T  8362571 cggggaataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacc 8362656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 15320179 - 15320292
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||| | ||||||||||| | ||||  |||  ||||| ||||||| | ||||||||||||||| ||||| ||| | |||| |    
T  15320179 ccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcag 15320278  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  15320279 aaaccggtgcgaaa 15320292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 50405668 - 50405603
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaa 323  Q
    |||||| ||||||| | ||| ||||||||||| ||||||||| | ||||||||| |||||| ||||    
T  50405668 cgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgcaaaaa 50405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 42412888 - 42412808
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    |||||||||| ||| ||| |||||| || ||||||||| ||||  ||| | |||| ||||||| |||||||||||||||||    
T  42412888 ccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtcg 42412808  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 47749170 - 47749106
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| | |||||| |||||||| ||||| ||| ||||||||||| || |||||||    
T  47749170 cgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaa 47749106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 41663970 - 41663857
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||| ||| |||||| ||||||| |||||| |||||||||||||||||||| | ||||||    
T  41663970 ccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcgg 41663871  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  41663870 aaaccggtgcgaaa 41663857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 26325825 - 26325919
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||  ||||||||  ||||| ||| |||||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  26325825 attcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 26325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 49078108 - 49078221
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| | ||||||  ||||  ||| |||||| ||||||| |||||||||||||||||| |||||||| ||||||||    
T  49078108 ccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcgg 49078207  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  49078208 aaaccggtgcgaaa 49078221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 9659291 - 9659180
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| ||||||||| |||||||||||||  |||| |||||| || |||| ||||||||||||||||||||||| ||| | ||| |||    
T  9659291 cggggaataccgggttcgattcccagg-ggaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttgga 9659193  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  9659192 aaccggtgcgaaa 9659180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 10422807 - 10422895
Alignment:
Q  234 aggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||  ||||  ||| |||||| ||||||| ||||||||||||||||||||||| ||| || |||||||| ||||||||||    
T  10422807 aggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaa 10422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 5504056 - 5504138
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||| ||| ||||| | |||| ||||||| ||||||||||||||||||||||| ||||| ||||||||| |||| |||||    
T  5504056 aacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaa 5504138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 14254358 - 14254280
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||| ||||||||| ||||  |||||||||| || |||| ||||||||||||||||||||||| ||||| |||||||||    
T  14254358 cagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgtccacctttgatgggtcggaaa 14254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 8764005 - 8764098
Alignment:
Q  229 ttcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||| ||||||||  ||||  ||| |||||| ||||||| | ||||||||||||||||||||| ||| | ||||||||| ||||||||||    
T  8764005 ttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaa 8764098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 13262107 - 13262168
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattga 300  Q
    |||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||||    
T  13262107 gaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccaccattga 13262168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 5855517 - 5855629
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| ||||||||||||||||||| ||||  ||| |||||| ||||||| ||||| |||||||||||| |||| ||  | |||||||    
T  5855517 cggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcgga 5855616  T
Q  310 aatcggtgcgaaa 322  Q
    || || |||||||    
T  5855617 aaccgatgcgaaa 5855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 10507714 - 10507794
Alignment:
Q  231 cccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||||||||||||||||||  |||  ||||  ||||||| |||||||||||||||||||||||| || | |||||||||    
T  10507714 cccaggaggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtccaccactggtgggtcggaaa 10507794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 11397974 - 11397890
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  | | || ||| ||||||| ||||| ||||||||||||||||| ||| | ||||||||||||||||||||    
T  11397974 ggaacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaa 11397890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 26660161 - 26660244
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||| |||| | |||||||||| ||||||| ||||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  26660161 ggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaa 26660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 16263562 - 16263652
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||| ||||  ||| |||||| ||||||| || ||||||| |||||||||||  ||||| | ||||||| ||||||||||    
T  16263562 ccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatggatcggaaaccggtgcgaaa 16263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 17642099 - 17642005
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  ||| |||||| ||||||| | ||||||||||||||||||||| ||| | |||||||||  |||||||||    
T  17642099 attcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 17642005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 33498934 - 33498840
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||||||| ||||| ||||  ||| |||||| ||||||| ||||||||||||||||||||||| ||||| | ||| ||| |||| |||||    
T  33498934 attctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatggatcgtaaagcggtacgaaa 33498840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 43959935 - 43959822
Alignment:
Q  210 ccggggaataacggattca-ttcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| |||| |||||||| ||||||||| ||||  ||| |||||| ||||||| | ||||||||||||||| ||||| ||  | | ||||    
T  43959935 ccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcgg 43959836  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  43959835 aaaccggtgcgaaa 43959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 50094927 - 50095007
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||||||||||||   ||||||||||  |||||| ||||| ||||||||||||||||||||  | ||||||||| ||||||    
T  50094927 ggaacaacgtttgaccagtacgcatgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaaccggtgc 50095007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 32884 - 32947
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtc 291  Q
    ||||||||||||||||||| ||||| ||| | |||| ||||||| |||||||| ||||||||||    
T  32884 attcccaggaggaacaacgcttggtcagtgcacatgcctctacgcatgagccgaattagtcgtc 32947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 10173083 - 10172972
Alignment:
Q  212 ggggaataacggattca-ttcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| |||||||| ||||||  | |||||||| ||||  ||| | |||| ||||||| ||||||||||||| ||| ||||| ||| | ||||||||    
T  10173083 ggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacctttggtgggtcggaa 10172984  T
Q  311 atcggtgcgaaa 322  Q
    | ||||||||||    
T  10172983 accggtgcgaaa 10172972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 297
Target Start/End: Original strand, 35908790 - 35908840
Alignment:
Q  247 tttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccat 297  Q
    |||||| ||| |||||| ||||||| |||||||||||||||||||||||||    
T  35908790 tttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccat 35908840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 45361977 - 45361883
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||||||||||||| ||||  ||| |||||| | ||||| || ||||||||||||||| |||| ||  | ||||||||| ||||||||||    
T  45361977 attctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 45361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 18915861 - 18915974
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  |||  ||||| ||||||| | |||||||||||||||  |||||||| | ||| ||    
T  18915861 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttgg 18915960  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  18915961 aaaccggtgcgaaa 18915974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 4581747 - 4581683
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| | |||||||| |||||||||||| ||| | ||||||||| ||||||||||    
T  4581747 cgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 16150767 - 16150683
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  | | ||||||||| ||||||  || | ||||| ||||||||| ||||||||| |||||||||| |||||    
T  16150767 ggaacaacgtttggccaatgcgcatgtctttacgtacaagtcagattaatcgtccacctttgataggttggaaatcggtacgaaa 16150683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 48761197 - 48761273
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaat 312  Q
    ||||||||||||||||| |||   |||| ||||||| | |||| |||||||||||||||| ||| | ||||||||||    
T  48761197 gaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccacctttggtcggtcggaaat 48761273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 34878626 - 34878673
Alignment:
Q  275 gagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  ||||| ||||| ||||||||||||||||||||    
T  34878626 gagccggattagtcacccacctttgatgggtcggaaatcggtgcgaaa 34878673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 45726528 - 45726461
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    |||| ||||||||| ||| |||||  ||| || ||||||||||| |||||||||||||||||| ||||    
T  45726528 attctcaggaggaataacatttggccagtgcgtatgtctctacgcatgagccggattagtcgttcacc 45726461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 48798184 - 48798105
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtc 288  Q
    |||||||||| ||| ||| ||| ||||| ||||||||| |||  |||| |||||| ||||||| ||||||||||||||||    
T  48798184 ccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 14357780 - 14357862
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||   ||| |||||| ||||||| | || |||||||| ||||  ||||||||| ||||||||| ||||||||||    
T  14357780 aacaacgtttgaccagtgcgcatgcctctacgcacgaaccggattaatcgtttaccattgatgggtcggaaaccggtgcgaaa 14357862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 21849299 - 21849206
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| |||| |||| |||||| ||||||| | |||||||||||||||  ||| |||| | ||||| ||| |||| |||||    
T  21849299 attcccagg-ggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaaccggtacgaaa 21849206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 311
Target Start/End: Complemental strand, 33418229 - 33418127
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||| ||||| ||||||| ||||| ||| || |||||| ||||  ||| |||||| ||||| | | ||||||||||||||||||||| ||| | ||||||    
T  33418229 ccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttggtcggtcgg 33418130  T
Q  309 aaa 311  Q
    |||    
T  33418129 aaa 33418127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 35211239 - 35211173
Alignment:
Q  256 tacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||| ||||||| |||||| | |||||||||||||| ||| | ||||||||| ||||| ||||    
T  35211239 tacgcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaa 35211173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 892352 - 892303
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||| ||||| ||| | | ||||||||||||||||||    
T  892352 atgagccggattagtcgcccacctttggtggatcggaaatcggtgcgaaa 892303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 33004129 - 33004016
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||||||| ||| ||||| | ||||| | ||||  ||| |||||| ||||||| | ||||||||||||||  |||||| || | |||||     
T  33004129 ccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcga 33004030  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  33004029 aaaccggtgcgaaa 33004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 45536784 - 45536829
Alignment:
Q  277 gccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||| |||||| |||| ||||||||| ||||||||||    
T  45536784 gccggattagtcgcccaccaatgatgggtcggaaaccggtgcgaaa 45536829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 51437515 - 51437564
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||||| |||||| ||| | ||||||||| ||||||||||    
T  51437515 atgagccggattagtcatccacctttggtgggtcggaaaccggtgcgaaa 51437564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 311
Target Start/End: Complemental strand, 1764253 - 1764209
Alignment:
Q  267 ctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    ||||| ||||| ||||||||||| ||||| |||||||||||||||    
T  1764253 ctacgcatgaggcggattagtcgcccacctttgataggtcggaaa 1764209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 10336534 - 10336602
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgat 301  Q
    |||| ||||||||| |||   ||| |||||| ||||||| ||||||||||||| ||||||||| |||||    
T  10336534 cagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatcgtccacctttgat 10336602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 12744613 - 12744557
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    |||| ||||||||| |||  |||| |||||||||||||| |||||||| ||||||||    
T  12744613 cagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcg 12744557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 12755603 - 12755547
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    |||| ||||||||| |||  |||| |||||||||||||| |||||||| ||||||||    
T  12755603 cagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcg 12755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 34697358 - 34697442
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||  |||| ||||  ||||| ||||||| ||||||||||||||||| ||||  ||||| ||| ||||| || |||||||    
T  34697358 ggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaaccgatgcgaaa 34697442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 40780945 - 40780859
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||||||| ||||| ||| |||||| ||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||    
T  40780945 ggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaaac 40780859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 29895785 - 29895898
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| ||||||||||||||||||||||||||| | | ||||    
T  29895785 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggttcgg 29895884  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  29895885 aaaccggtgcgaaa 29895898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 16450317 - 16450411
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| ||||  ||| | |||| ||||||| ||||||| ||||||||||||||| ||| ||||||||||| ||||||||||    
T  16450317 attcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaa 16450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 53599058 - 53599171
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||  ||| |||||| ||||||| ||||||||||||| |||| |||| ||  | | ||||    
T  53599058 ccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtggatcgg 53599157  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  53599158 aaaccggtgcgaaa 53599171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 55921032 - 55921145
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||| ||| |||||| ||||||||||||||||||||| |||  |||| ||| | ||||||    
T  55921032 ccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcgg 55921131  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  55921132 aaaccggtgcgaaa 55921145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 43458613 - 43458724
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    ||||||||  |||||| |||||||||||||| |||| ||||  ||| |||||| ||||||| | ||||||||||||||||||||| |||||  |||||||    
T  43458613 ggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtccacctttgatgagtcggaa 43458712  T
Q  311 atcggtgcgaaa 322  Q
    | || |||||||    
T  43458713 accgttgcgaaa 43458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 4738639 - 4738729
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||| || |  ||| |||||||||||||| |||||| | |||||||||||||| ||| | ||||||||| ||||||||||    
T  4738639 ccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4738729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 38166044 - 38166138
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| ||||  ||| |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  38166044 attcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 38166138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 42722671 - 42722577
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||| ||||  ||| |||||| ||||||| |||||||||||||||||| |||| ||  | ||||| ||| ||||||||||    
T  42722671 attcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaa 42722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 36145328 - 36145215
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| | ||||||| ||| | ||| |||||| ||||||  ||||||||||||||||||||||| |||||   ||||    
T  36145328 ccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacctttgatgaatcgg 36145229  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  36145228 aaaccggtgcgaaa 36145215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 43468345 - 43468458
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||| ||||  ||| | ||| |||||||| ||||||||||||||||| |||||| || | ||||||    
T  43468345 ccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggtgggtcgg 43468444  T
Q  309 aaatcggtgcgaaa 322  Q
    | | ||||||||||    
T  43468445 agaccggtgcgaaa 43468458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 7246730 - 7246646
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||  ||| |||||| ||||||| ||||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  7246730 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 7246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 8064862 - 8064802
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||    
T  8064862 cgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaaccggtgc 8064802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 317
Target Start/End: Original strand, 8889020 - 8889128
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||| ||||||||  ||||  ||| |||||| ||||||| ||||||||||||||||||||||| ||| | ||||||    
T  8889020 ccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtcgg 8889119  T
Q  309 aaatcggtg 317  Q
    ||| |||||    
T  8889120 aaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 1446824 - 1446911
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacca 296  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  1446824 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacca 1446911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 2559307 - 2559418
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||||||| ||| | ||||||||||||| ||||  ||| |||||| ||||||| |  |||||||||| ||||||||| ||| | ||||||||    
T  2559307 ggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaa 2559406  T
Q  311 atcggtgcgaaa 322  Q
    | ||||||||||    
T  2559407 accggtgcgaaa 2559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 29588753 - 29588847
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| | ||||| | |||| |||| |||||| ||||||| | |||||||||||||  |||||||||| | |||||||||||| |||||||    
T  29588753 attcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaatcgatgcgaaa 29588847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 49260759 - 49260669
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    ||||||| | ||||||||| ||||  ||| |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||||||||||||||    
T  49260759 attcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtcggaaatcggtgc 49260669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 311
Target Start/End: Original strand, 46108718 - 46108791
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||||| ||||| |||| |||||| ||||||| ||||||| ||||||||||||||  ||||| |||||||||    
T  46108718 ggaacaacatttggctagtgcgcatgcctctacgcatgagccagattagtcgtccacttttgatgggtcggaaa 46108791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 47078456 - 47078569
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||| ||||  ||| | |||| ||||||| | |||||||||||||||  |||||||| | ||||||    
T  47078456 ccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgg 47078555  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| | ||||||||    
T  47078556 aaaccagtgcgaaa 47078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 26237504 - 26237420
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||||||||| | ||| || |||||| |||| ||||| ||||||||| ||||||||||||| |||||||||  | |||||||||    
T  26237504 aacaacgtttgatcagtgcgtatgtctttacgcatgagtcggattagtagtccaccattgatgggtcggaaactgatgcgaaaac 26237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 6032705 - 6032642
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaa 323  Q
    |||| ||||||| ||||||||||||||||||| ||| ||| | ||||||||| |||||||||||    
T  6032705 catgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaaa 6032642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 14859313 - 14859404
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||||||||| |||||   ||| |||||||||||||| | ||||| |||||||| |||||| |||||  ||||||||  |||||||||||    
T  14859313 caggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaaac 14859404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 38841431 - 38841368
Alignment:
Q  259 gcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||| ||||| ||||||||||||||| | ||| ||| |||||||||| |||||||    
T  38841431 gcatgtctctacgcatgagtcggattagtcgtccatctttggtagttcggaaatcgatgcgaaa 38841368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 52950082 - 52950193
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||||||| ||||||||| ||||  ||| |||||| ||||||  |||| || ||||||||||||||| ||| | ||||||||    
T  52950082 ggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcggaa 52950181  T
Q  311 atcggtgcgaaa 322  Q
    | || |||||||    
T  52950182 accgatgcgaaa 52950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 14124033 - 14124127
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| |||||||| |||||  ||| |||||| ||||||  | |||||||||||||||  |||||||| | ||| ||||| ||||||||||    
T  14124033 attcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaa 14124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 20354665 - 20354727
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgat 301  Q
    |||||||| |||| |||| |||||| ||||||| ||||| |||||||||||||||| ||||||    
T  20354665 gaacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccactattgat 20354727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 17080061 - 17080154
Alignment:
Q  229 ttcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| | ||||||||| ||||  ||| |||||| ||||||| |||||||||||||||||  |||| ||||| | ||| ||| ||||||||||    
T  17080061 ttcccatggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaa 17080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 54946284 - 54946349
Alignment:
Q  246 gtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||||| ||| ||||| | |||||||||    
T  54946284 gtttggtcagtccgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaa 54946349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 295645 - 295534
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| | ||||| |||||||| |||||||||||||||  ||| |||||| ||||||| | || || ||||||||||||||| ||| | |||  |    
T  295645 ccggggaataccagattcgattcccag-aggaacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgttggtgggtttg 295547  T
Q  309 aaatcggtgcgaa 321  Q
    ||| |||||||||    
T  295546 aaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 14858757 - 14858821
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||||| ||| | ||||| ||||||||| ||||| |||| |||| ||||||||||    
T  14858757 cgcatgtctctacgtacgagtcagattattcgtccacctttgatgggtcagaaaccggtgcgaaa 14858821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 20532499 - 20532419
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaat 312  Q
    ||||||||||||||| ||||  ||| |||||| ||||||| ||||||||||| ||||| ||||| ||| | | ||||||||    
T  20532499 ccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttggtggatcggaaat 20532419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 47682466 - 47682382
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||||||||  ||| | |||||||||||| | ||||||| ||||||| ||||| ||| | ||||||||| ||||||||||    
T  47682466 ggaataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaa 47682382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 13552156 - 13552215
Alignment:
Q  265 ctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||||| |||||||||||||||| |||||||||||| | | ||||| |||||| |||||    
T  13552156 ctctacgcatgagccggattagtcatccaccattgatggataggaaaccggtgcaaaaac 13552215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 15840014 - 15839935
Alignment:
Q  243 aacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||  ||| |||||| ||||||| ||||||||||||||||| ||  | ||||||||| ||||| | ||||||||    
T  15840014 aacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgcccttctttgataggttggaaaccagtgcgaaa 15839935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 49952228 - 49952145
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg-tccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||| ||| |||| | ||||||| |||||||||||||||||   |||| ||||| ||| ||||| ||||||||||    
T  49952228 aacaacgtttggtcagtgcgcacgcctctacgcatgagccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaaa 49952145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 320
Target Start/End: Complemental strand, 1940868 - 1940779
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcga 320  Q
    ||||||||| ||||||||| ||||   || |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||| ||| ||||||||    
T  1940868 attcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 24166479 - 24166561
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||  ||| |||||| ||||||| | ||||| ||||||||  ||||| ||||| | ||||||| ||||||||||    
T  24166479 aacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgcgaaa 24166561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 48317364 - 48317286
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||||||||||| ||||| |||  | ||| ||||||| | ||||||||||||||| ||||| ||||| ||| |||||    
T  48317364 caggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccaccgttgatgggttggaaa 48317286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 55703834 - 55703752
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||| ||| |||||||||| ||  | ||||||||||||| ||||| | || || ||||| ||||||||| ||||    
T  55703834 aacaacgtttggtcagtgcgcatgtctcaacccacgagccggattagttgtccatcttttatgggtcgaaaatcggtgtgaaa 55703752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 42722428 - 42722379
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| |||||||||||||||||| || | ||||| ||||||||||||||    
T  42722428 atgagtcggattagtcgtccaccaatggtgggtcgaaaatcggtgcgaaa 42722379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 14567286 - 14567350
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| | |||||||||||||||  | || ||| | ||||||||||||||||||||    
T  14567286 cgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaa 14567350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 50485971 - 50486043
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||||| ||||  || ||||||| ||||||| | ||||||||||||||| ||||||||  | |||||||||    
T  50485971 gaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaa 50486043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 38578980 - 38578867
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||| ||||  ||| |||||| ||||||| ||||||||||||||||| ||||| ||| | ||||||    
T  38578980 ccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcgg 38578881  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  38578880 aaaccggtgcgaaa 38578867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 48804679 - 48804792
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||| | ||||||||  ||||  ||| |||||| ||||||| ||||||||||||||||||||||||||| | ||||||    
T  48804679 ccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgg 48804778  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  48804779 aaaccggtgcgaaa 48804792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 17748494 - 17748382
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| ||||||||| ||||||||| ||||  ||| |||||| ||||||||| ||||||||||||||||||||| ||| | |||||||    
T  17748494 cggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcgga 17748395  T
Q  310 aatcggtgcgaaa 322  Q
    || || |||||||    
T  17748394 aaccgatgcgaaa 17748382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 4195292 - 4195202
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||| ||||| |||| |||||| ||||||| |||||||||||||| |||||||||||| | ||| ||||| || |||||||    
T  4195292 ccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaa 4195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 48551902 - 48551966
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||    
T  48551902 cgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaa 48551966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 10047989 - 10047876
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||| | ||||||| |||||| | |||||||||||||||||| | ||||||    
T  10047989 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcgg 10047890  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  10047889 aaaccggtgcgaaa 10047876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 20247254 - 20247181
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    ||||||||| ||||  ||||| |||||||||||||| | | ||||||||||||||||||||||||||| |||||    
T  20247254 ggaacaacgcttgggcagtacacatgtctctacgtacgggtcggattagtcgtccaccattgataggttggaaa 20247181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 4228839 - 4228759
Alignment:
Q  237 aggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtg 317  Q
    |||||||||||||||  ||| | |||| | ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||    
T  4228839 aggaacaacgtttggccagtgcacatgcccctacgcatgagccggattagtcgcccaccattgatgggtcgaaaatcggtg 4228759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 37514946 - 37515030
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||| ||| |||||||||||||| | ||||||||||| |||| |||||||  | ||||||||| ||||| ||||    
T  37514946 ggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgttcaccattagtgggtcggaaaccggtgtgaaa 37515030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 43862083 - 43861972
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||||||| ||||||||||||||  ||| |||||| ||||||| |||||||||||||||| | |||| ||| | | ||| ||    
T  43862083 ggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaa 43861984  T
Q  311 atcggtgcgaaa 322  Q
    | ||||||||||    
T  43861983 accggtgcgaaa 43861972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 47341891 - 47341985
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  ||| |||||| ||||||| | |||| ||||| ||||| |||||||| | ||||||||||||||||||||    
T  47341891 attcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaa 47341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 318
Target Start/End: Original strand, 13095854 - 13095963
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| |||||||||||||||||  |||| ||| | ||||||    
T  13095854 ccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcgg 13095953  T
Q  309 aaatcggtgc 318  Q
    ||| ||||||    
T  13095954 aaaccggtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 41945518 - 41945582
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| | ||||||||||||||||||||| ||| |  |||||||||||||||||||    
T  41945518 cgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaa 41945582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 3353451 - 3353533
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| |||||  ||| |||||| ||||||| | ||||||||||||||||||||| ||||| | || |||| ||||||||||    
T  3353451 aacaacatttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaa 3353533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 29151955 - 29152049
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||| ||||||||||||   ||| |||||| ||||||  | || |||||||| ||||| ||||||||| ||||||||| || |||||||    
T  29151955 attcccaggaagaacaacgtttgaccagtgcgcatgcctctacacacgatccggattaatcgtctaccattgatgggtcggaaaccgatgcgaaa 29152049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 24983483 - 24983442
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattg 299  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  24983483 cgcatgcctctacgcatgagccggattagtcgtccaccattg 24983442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 28744178 - 28744271
Alignment:
Q  229 ttcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| ||| ||||||| | ||||  |||||||||  |||||| || ||||||||||||||||||||| ||| | |||||||||  |||||||||    
T  28744178 ttcctagggggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 28744271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 39474965 - 39475022
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    ||||||||| ||||| ||| |||||  ||||||| |||||||||||||||||||||||    
T  39474965 ggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacc 39475022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 36619317 - 36619277
Alignment:
Q  259 gcatgtctctacgtatgagccggattagtcgtccaccattg 299  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  36619317 gcatgcctctacgcatgagccggattagtcgtccaccattg 36619277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 39420862 - 39420942
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    ||||||||| ||||  ||| ||| || ||||||| ||||||||||||||||||| ||| ||||| || |||||| ||||||    
T  39420862 ggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgc 39420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 44961706 - 44961638
Alignment:
Q  254 agtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||||||||| ||| | |||||||  ||| || ||||| ||||||||| ||||||||||    
T  44961706 agtacgcatgtctctacgtacgagtcagattagttatccgcctttgatgggtcggaaaccggtgcgaaa 44961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 9685779 - 9685838
Alignment:
Q  265 ctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||||| |||||||||||||||| |||||||||||| | | ||||| |||||| |||||    
T  9685779 ctctacgcatgagccggattagtcatccaccattgatggataggaaaccggtgcaaaaac 9685838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 1797475 - 1797565
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    ||||||||| | ||||||| ||||  ||| |||||||||||||| | |||||||| |||||||||| | ||||| | ||| ||| ||||||    
T  1797475 attcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtcgtccatctttgatggatcgaaaaccggtgc 1797565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 5069905 - 5069815
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||| || | ||||  ||||| ||||||| |  |||||||||||||| ||||| ||| | ||||||||| || |||||||    
T  5069905 ccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaa 5069815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 16802119 - 16802209
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattg 299  Q
    |||||||||| ||||||| ||||  ||||||||||||| ||||  ||| || ||| ||||||| | |||||||||||||||  ||||||||    
T  16802119 ccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtcgctcaccattg 16802209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 22993480 - 22993367
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||||||||||||| ||||  |||  ||||| ||||||| | || ||||||||||||  |||| ||| | |||| |    
T  22993480 ccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgctcacctttggtgggtcag 22993381  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  22993380 aaaccggtgcgaaa 22993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 29805524 - 29805483
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagcc 279  Q
    ||||||||||||||| ||| |||||||||||||| |||||||    
T  29805524 ggaacaacgtttggtcagtgcgcatgtctctacgcatgagcc 29805483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 34659222 - 34659335
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| |||| || | ||||||||| |||   ||| |||||| ||||||| | ||||||||||||||| ||||||||| |  ||||     
T  34659222 ccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcga 34659321  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  34659322 aaaccggtgcgaaa 34659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 3603402 - 3603466
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| | ||||||||||| |||| |||  ||| | ||||||||||||||||||||    
T  3603402 cgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaa 3603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 18785665 - 18785777
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||| ||||||||  ||||  ||| |||||| ||||||| |||| | ||||||||||| ||||  || | ||||||    
T  18785665 ccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcgttcacctctggtgggtcgg 18785764  T
Q  309 aaatcggtgcgaa 321  Q
    ||| |||||||||    
T  18785765 aaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 22573857 - 22573921
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| || |||| ||||||||||||| ||||||| ||||||| ||| | ||| ||||||||||    
T  22573857 cgcatgcctttacgcatgagccggattaatcgtccatcattgatgggttgaaaaccggtgcgaaa 22573921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 22973964 - 22974076
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| |||| |||| ||||||||| ||||  |||  |||||  |||||| ||||||| ||||||||||||||| ||| | |||| ||    
T  22973964 cggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacctttggtgggtcaga 22974063  T
Q  310 aatcggtgcgaaa 322  Q
    || ||| ||||||    
T  22974064 aaccggcgcgaaa 22974076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 27875199 - 27875087
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||||||| ||||||||| |||| |||  ||||  ||| | |||| ||||||| ||||| || |||||||||||||| ||  | ||||| ||    
T  27875199 ggggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaa 27875100  T
Q  311 atcggtgcgaaaa 323  Q
    | |||||||||||    
T  27875099 accggtgcgaaaa 27875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 28396254 - 28396166
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggt 316  Q
    |||| |||| ||||||||| || | | || |||||| || |||| ||||||||||||||||||| ||| ||| | ||||||||| ||||    
T  28396254 attctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 21898645 - 21898758
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||||||||||||| ||||  ||| |||||| ||||||| |||||||||||||||||| |||| ||  | ||||||    
T  21898645 ccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgg 21898744  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  21898745 aaaccggtgcgaaa 21898758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 8932658 - 8932771
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  |||| |||| |||||| ||||||| ||||||||||||| ||  ||||| ||||| ||||||    
T  8932658 ccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcgg 8932757  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  8932758 aaaccggtgcgaaa 8932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 8944124 - 8944237
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  |||| |||| |||||| ||||||| ||||||||||||| ||  ||||| ||||| ||||||    
T  8944124 ccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcgg 8944223  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  8944224 aaaccggtgcgaaa 8944237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 14783483 - 14783420
Alignment:
Q  259 gcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  14783483 gcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 14783420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 6606159 - 6606097
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  6606159 catgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 6606097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 17114959 - 17114901
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  17114959 catgcctctacgcatgagccggattagtcgcccacctttgataggtcggaaatcggtgc 17114901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 5253336 - 5253223
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| ||||||||||||| ||| ||||| ||| | ||||||    
T  5253336 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcgg 5253237  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  5253236 aaaccggtgcgaaa 5253223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 29333223 - 29333139
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  ||| |||||| ||||||| |||||||| || ||||||||||| ||| |||||||| || ||||||||||    
T  29333223 ggaacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcggtaaccggtgcgaaa 29333139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 8938727 - 8938821
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||  |||   ||| |||| |  |||||| |||||||| |||||||||||||| ||||| ||||||||| ||||||||||    
T  8938727 attcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 8938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 12635830 - 12635924
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| | ||||||| |||| |||| |||||| ||||||| |  |||||||||||||| |||| |||| | ||||||||| ||||||||||    
T  12635830 attcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaaa 12635924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 13036093 - 13036004
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| ||||||||  ||||  ||| |||||| ||||||| ||||||| |||||||||||||| |||| | ||||||||| ||||||||||    
T  13036093 cagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaa 13036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 3601082 - 3601194
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| |||| |||| ||||||||| ||||  ||| |||||| || |||  | ||||||||||||||||||||| ||| | |||||||    
T  3601082 cggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcgga 3601181  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  3601182 aaccggtgcgaaa 3601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 14107470 - 14107358
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| ||||||||||||||||||| |||   ||| | |||| ||||||| ||||||||||||||||| |||  |||  | |||||||    
T  14107470 cggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtcgcccattattagtgggtcgga 14107371  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  14107370 aaccggtgcgaaa 14107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 30788937 - 30788853
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  ||| |||||| ||||| | | ||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  30788937 ggaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 30788853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 5029844 - 5029927
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||| ||| |||||| ||||||| |||||  |||||||||| ||| | ||||| |||||||||  |||||||||    
T  5029844 gaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaa 5029927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 9633708 - 9633625
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||| ||||  ||| |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 9633625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 34954713 - 34954630
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||| |||| ||||||||||||||  ||| | |||  ||||||| ||||||| ||||||||||||||| ||||| |||||||||    
T  34954713 attctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttgatgggtcggaaa 34954630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 2271367 - 2271301
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||||||||||| | ||||||||||||||||||||| ||||| |||| |||| | |||| |||||    
T  2271367 cgcatgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaaccagtgcaaaaac 2271301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 12606427 - 12606513
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    |||||||||| | ||||| ||| ||||| ||||||||||||||  ||| |||||| ||||||| | ||||||||||||||| |||||    
T  12606427 ccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 12606513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 19089514 - 19089608
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  |||  ||||| ||||||| | ||||||||||||||||| ||| ||| | ||||||||| ||||||||||    
T  19089514 attcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 19089608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 10396499 - 10396583
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  ||| ||||| |||||| | ||||| ||||||||||  |||  |||||||||||||||| |||| |||||    
T  10396499 ggaacaacgtttggccagtgcgcatatctctatgcatgagtcggattagtcacccattattgataggtcggaaaccggtacgaaa 10396583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 9179830 - 9179736
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  |||   |||| ||||  ||||||| |||||| |||||||||||||||| ||| | | |||||||||||| |||||    
T  9179830 attcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtcgtccacctttggtggatcggaaatcggtccgaaa 9179736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 21167431 - 21167485
Alignment:
Q  268 tacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| ||||||||||||| ||||||||||||||| ||| | ||| ||||||||||    
T  21167431 tacgcatgagccggattaatcgtccaccattgatgggttgaaaaccggtgcgaaa 21167485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 8612087 - 8611974
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||||||||||||| |||   |||  |||||  |||||| |||| |||||||||||| ||||| ||| | |||| |    
T  8612087 ccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcag 8611988  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  8611987 aaaccggtgcgaaa 8611974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 8888910 - 8888971
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgat 301  Q
    ||||||||||||  ||| |||||  ||||||| ||||| ||||||||||||||||| |||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgat 8888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 19230643 - 19230582
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattg 299  Q
    ||||||||| ||||| |||| ||||| ||||||| | |||||||||||||||| || |||||    
T  19230643 ggaacaacgcttggtcagtatgcatgcctctacgcacgagccggattagtcgttcatcattg 19230582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 311
Target Start/End: Complemental strand, 29444849 - 29444776
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    ||||||||| ||||  ||| |||||| ||||||| ||||||||||||||| ||||| | ||| | |||||||||    
T  29444849 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaa 29444776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 8149859 - 8149795
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||| ||||||| || ||||| |||||||||||||| ||| | ||| ||||| ||||||||||||    
T  8149859 catgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaaac 8149795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 5732033 - 5731920
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||||||||||||| ||||  ||| |||||| ||||||||||||||| |||||||||| |||| ||  | ||||||    
T  5732033 ccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcgg 5731934  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  5731933 aaaccggtgcgaaa 5731920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 1538426 - 1538538
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| ||||||||||||| ||||||||||||| | |||||||    
T  1538426 cggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcgga 1538525  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  1538526 aaccggtgcgaaa 1538538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 9805017 - 9805111
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| ||||  ||| |||||| ||||||| ||||||||||||||||||||||| ||| | |||||||||  |||||||||    
T  9805017 attcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaa 9805111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 20525832 - 20525946
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  || |  ||| |||||| ||||||| ||||||||||||||||||||||||||| | | ||||    
T  20525832 ccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcgg 20525931  T
Q  309 aaatcggtgcgaaaa 323  Q
    ||| |||||||||||    
T  20525932 aaaccggtgcgaaaa 20525946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 42086340 - 42086434
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| |||   ||| |||||| ||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||    
T  42086340 attcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 42086434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 23247462 - 23247352
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||||||||||||||||| ||| | |||| ||||| ||||||| | ||||| ||||||||||||||| ||||| ||||| ||    
T  23247462 ggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtcgtccacctttgat-ggtcgaaa 23247364  T
Q  311 atcggtgcgaaa 322  Q
    | ||||||||||    
T  23247363 accggtgcgaaa 23247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 41163572 - 41163460
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||||  ||| | |||||||||||| |||||| |||||||||||||||| ||  | ||||||    
T  41163572 ccggggaataccgggttcgattcccagg-ggaacaacgtttggccagtgcacatgtctctacgcatgagctggattagtcgtccaccttttgtgggtcgg 41163474  T
Q  309 aaatcggtgcgaaa 322  Q
    |||  |||||||||    
T  41163473 aaactggtgcgaaa 41163460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 24875369 - 24875452
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||   ||| |||||||||||||| | ||||||||||| ||||||||| ||||| |||||||||||  |||||||    
T  24875369 gaacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttgatgggtcggaaatcaatgcgaaa 24875452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 42291599 - 42291504
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaa 323  Q
    |||||||||  |||||||| ||||  ||| | |||| ||||||| | ||||||||||||||||||||| ||||| | ||||||| |||||||||||    
T  42291599 attcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaaa 42291504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 19572737 - 19572831
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  ||| |||||| ||||||| |||||||||||||||||| |||||||| | ||| ||||| | ||||||||    
T  19572737 attcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaa 19572831  T

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Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 23383670 - 23383764
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| ||||  ||| ||| || ||||||| |||||| |||||||||||||||| ||| | |||||||||  |||||||||    
T  23383670 attcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 23383764  T

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Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 14728109 - 14728190
Alignment:
Q  241 acaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||| ||| |||||| ||||||| ||||||||||||||| |  |||| ||||| ||||||||| ||||||||||    
T  14728109 acaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaa 14728190  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 11845885 - 11845801
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||  ||| |||||| |||||||||||||||| |||| ||| ||||| ||||| ||| ||||| ||||| ||||    
T  11845885 ggaacaacgtttggccagtgcgcatgcctctacgtatgagccgaattaatcgcccacctttgatgggttggaaaccggtgtgaaa 11845801  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 25417295 - 25417183
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||| ||| ||||||||| ||||||||| ||||  ||| |||||| ||||||| | |||||||||||||| |  ||||||| | |||| ||    
T  25417295 cggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtcatttaccattggtgggtcaga 25417196  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  25417195 aaccggtgcgaaa 25417183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 42861282 - 42861218
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| ||||||||||||| ||||||||||||| | ||||||| | ||||||||||    
T  42861282 cgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaa 42861218  T

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Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 40060342 - 40060393
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||    
T  40060342 atgagccggattaatcgtccaccattgatgggttggaaaccggtgcgaaaac 40060393  T

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Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 9168339 - 9168257
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    ||||||||||| ||||  ||| |||||  ||||||| ||||||||||||||||||||||| ||  | ||||| ||||||||||    
T  9168339 gaggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaatcggtgc 9168257  T

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Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 9812866 - 9812979
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||||||||||||| ||||  |||  |||||  |||||| |||| |||||||||||| ||||| ||| | |||| |    
T  9812866 ccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcag 9812965  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  9812966 aaaccggtgcgaaa 9812979  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 2485239 - 2485303
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||||||||| |||||||||||  |||| ||||| ||||||||| || |||||||    
T  2485239 cgcatgcctctacgtatgagtcggattagtcgctcacctttgatgggtcggaaaccgatgcgaaa 2485303  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 40117410 - 40117522
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| || |||| ||| ||||| ||||||||| ||||  ||| |||||| ||||||| ||||||||||||| |||| |||| ||| | | ||| |    
T  40117410 cggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaa 40117509  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  40117510 aaccggtgcgaaa 40117522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 41801020 - 41801084
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||| | |||||||||||||||| || | ||||| ||||||||| ||||| ||||    
T  41801020 cgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaagcggtgtgaaa 41801084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 27648488 - 27648425
Alignment:
Q  259 gcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||||||||||||||||||||||||||||| | ||| | | ||||||| || |||||||    
T  27648488 gcatgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaaccgatgcgaaa 27648425  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 8513564 - 8513626
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| ||||||| | ||||| ||||||||||||||| ||| | ||||||||| ||||||||||    
T  8513564 catgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 8513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 12081921 - 12082015
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||| ||||||||| ||||  ||| ||||||  |||||| | |||||| |||||||||||||| ||| |  |||||||||||||| ||||    
T  12081921 attctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttggtgagtcggaaatcggtgtgaaa 12082015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 14588706 - 14588644
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    ||||||||| |||| |||   ||| |||||| ||||||| |||||||||||||||||||||||    
T  14588706 caggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 14588644  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 36783296 - 36783346
Alignment:
Q  268 tacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||| ||||||||||||||||||||||||||| | ||| ||||| ||||||    
T  36783296 tacgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgc 36783346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 39099841 - 39099783
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||| ||||||| ||||||||||||||||| ||||| ||| | ||||||||| ||||||    
T  39099841 catgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 39099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 7308458 - 7308397
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    ||||||||| ||||||||| ||||  ||| | |||| ||||||| |||||||||||||||||    
T  7308458 attcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtcg 7308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 12705008 - 12705121
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||||||||||||| |||   |||  |||||  |||||| |||| |||||||||||| ||||| ||| | |||| |    
T  12705008 ccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcag 12705107  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  12705108 aaaccggtgcgaaa 12705121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 14974408 - 14974351
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    |||||||| |||||  ||| | |||| ||||||| |||||||||||||||||||||||    
T  14974408 ggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtcgtccacc 14974351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 18136374 - 18136280
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggatta----gtcgtccaccattgataggtcggaaatcggtgc 318  Q
    ||||||||| ||||||||  ||||| |||  ||||| ||||||  |||||||||||||    |||||||||||||| | ||||||||| ||||||    
T  18136374 attcccagggggaacaacacttggtcagtgtgcatgcctctacacatgagccggattaattagtcgtccaccattggtgggtcggaaaccggtgc 18136280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 25950643 - 25950594
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||||||| ||| | ||||| |||||| |||||||    
T  25950643 atgagccggattagtcgtccacctttggtgggtcgaaaatcgatgcgaaa 25950594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 28857196 - 28857253
Alignment:
Q  265 ctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||| |||||||||||||||||  |||| ||| | ||||||||| ||||||||||    
T  28857196 ctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 28857253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 37263235 - 37263347
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| |||| |||| ||||||||| ||||  | | |||||| ||||||| | ||||||||||||||||||||| ||  | | ||||    
T  37263235 ccggggaatatcgggttcgattctcagg-ggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccacctttattggatcgg 37263333  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  37263334 aaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 43399146 - 43399235
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||| |||| ||||  ||| |||||| ||||||| | |||| |||||||||||||||  ||| | ||||||||| ||||||||||    
T  43399146 cagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaa 43399235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 20255412 - 20255476
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||| |  ||||||||  |||||||||    
T  20255412 cgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaa 20255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 322
Target Start/End: Original strand, 12864218 - 12864330
Alignment:
Q  211 cggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgga 309  Q
    ||||||||| ||||||| ||| ||||| ||||||||  ||||| ||| |||||| |||| || ||||||| ||||||||||||||||||| | |||||||    
T  12864218 cggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcgga 12864317  T
Q  310 aatcggtgcgaaa 322  Q
    || ||||||||||    
T  12864318 aaccggtgcgaaa 12864330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 7747267 - 7747380
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||||||||||||||||||  |||  ||||| ||||||| |||||||||||||||||| |||| ||  | ||||||    
T  7747267 ccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgg 7747366  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  7747367 aaaccggtgcgaaa 7747380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 41220628 - 41220741
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||||||||||||| ||||  ||| |||||| ||||||| |||||||| ||||||||| |||| ||  | ||||||    
T  41220628 ccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcgg 41220727  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  41220728 aaaccggtgcgaaa 41220741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 14169673 - 14169609
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||| ||||||||||||||||||| ||||||| | ||||||||| ||||||||||    
T  14169673 cgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaa 14169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 10823072 - 10823166
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||| ||||  ||| |||||| ||||||| | ||||||||||||||| ||||| ||  | ||||||||| ||||||||||    
T  10823072 attcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaa 10823166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 16325607 - 16325701
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  |||  ||||| ||||||| ||||||| ||||||||||||||||||| | ||||||||| ||||||||||    
T  16325607 attcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 16325701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 25540498 - 25540404
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||| ||||||||| ||||  ||| |||||| ||||||| | ||||||||||||||||||||| ||| | ||||||||| ||||||||||    
T  25540498 attcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 25540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 34130364 - 34130302
Alignment:
Q  260 catgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||| ||||||| ||||||||||| ||||||| ||| ||||||||||||||||||    
T  34130364 catgtctctacgcatgagccagattagtcgtctaccattggtagatcggaaatcggtgcgaaa 34130302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 6358264 - 6358151
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| | ||||| ||| ||||| ||||||||  ||||  ||| |||||| ||||||| ||||||||||||||||||||||||||| | |||||     
T  6358264 ccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcga 6358165  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||| ||||    
T  6358164 aaaccggtgtgaaa 6358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 20116676 - 20116612
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| |||||||||||||| |||||||| ||||| ||||||||| ||||||||||    
T  20116676 cgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaa 20116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 37560195 - 37560279
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||| ||| |||||| ||||||| | ||||||||||| ||||||||| ||||| ||||| ||| ||||| ||||    
T  37560195 ggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaaccggtgtgaaa 37560279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 311
Target Start/End: Complemental strand, 10026710 - 10026627
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||| |||| ||||||||||||||  ||| |||||| ||||||| ||||||||||||||||| ||||| ||| | |||||||||    
T  10026710 attctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaa 10026627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 44139479 - 44139590
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||||||| ||||||||| ||||  ||| ||| || ||||||| | ||||||||||||||| |||||| || | ||||||||    
T  44139479 ggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaa 44139578  T
Q  311 atcggtgcgaaa 322  Q
    | ||||||||||    
T  44139579 accggtgcgaaa 44139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 22593147 - 22593228
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    ||||||||| ||||||||||| ||  ||| |||||| ||||||| ||||||||||||||||||||||| ||| | ||||||||    
T  22593147 attcccagggggaacaacgtt-ggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaa 22593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 2550861 - 2550946
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccac 294  Q
    |||||||||| ||| ||| ||||||||||||||||||  || |  ||| |||||||||||||| ||||||||||||||||| ||||    
T  2550861 ccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtcgcccac 2550946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 2784963 - 2785040
Alignment:
Q  247 tttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||| ||| |||||| ||||||| ||||| | ||||||||||||| |||||||  |||||||| ||||||||||||    
T  2784963 tttggtcagtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgcgaaaac 2785040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Complemental strand, 19976896 - 19976807
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||| |||||||||| ||| |||||||||||||| || || || |||||||| ||||| |||||   ||||||||||||||||||    
T  19976896 cagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtcgcccacctttgatgaatcggaaatcggtgcgaaa 19976807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 38962780 - 38962869
Alignment:
Q  233 caggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||| ||||  ||| |||||| ||||||| |||| |||||||||||||||||| ||| | |||| ||||  |||||||||    
T  38962780 caggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaactggtgcgaaa 38962869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 16813249 - 16813165
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||   |||||||||| ||||| | | ||||||||||||||||||| | ||| ||||| ||||||| ||||||||    
T  16813249 ggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 16852528 - 16852444
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||   |||||||||| ||||| | | ||||||||||||||||||| | ||| ||||| ||||||| ||||||||    
T  16852528 ggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 324
Target Start/End: Complemental strand, 20612648 - 20612532
Alignment:
Q  211 cggggaataacggattc-attcccaggagg-aacaacgtttggttagtacgcatgtctctacgtatgagccgg-attagtcgtccaccattgataggtcg 307  Q
    ||||||||| ||| ||| |||| ||||||| ||||||  ||||  ||| |||||| ||||| | ||||||||| |||||||||||||||||| | |||||    
T  20612648 cggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcg 20612549  T
Q  308 gaaatcggtgcgaaaac 324  Q
    |||| ||||||||||||    
T  20612548 gaaaccggtgcgaaaac 20612532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 311
Target Start/End: Original strand, 34356201 - 34356301
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||| ||||| ||||||||  ||||| ||| |||||| ||||| | ||||||||||||| |||| |||||||||| ||||||||    
T  34356201 ggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggattaatcgtgcaccattgatgggtcggaa 34356300  T
Q  311 a 311  Q
    |    
T  34356301 a 34356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 29422274 - 29422321
Alignment:
Q  275 gagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  29422274 gagccggattagtcgtccacctttgatggatcggaaatcggtgcgaaa 29422321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 34722703 - 34722786
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||| ||||| ||| | |||||||||||| | ||||||||||||||| ||||| ||||| | || |||| ||||||||||    
T  34722703 gaacaacgcttggtcagtgcacatgtctctacgcacgagccggattagtcgcccacctttgatggatcagaaaccggtgcgaaa 34722786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 35946781 - 35946844
Alignment:
Q  259 gcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||||||| | ||||||||||||||||||||||||| | |||||||||  |||||||||    
T  35946781 gcatgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaa 35946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 3643973 - 3643887
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||| ||||  ||| |||||| ||||||| |||||| |||||||||||||||| ||| | || |||||| || |||||||    
T  3643973 gaggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaa 3643887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 3848996 - 3848914
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||  ||  |||||||||||||| | ||| |||||||||||| |||| ||||| ||||| |||| |||||||||    
T  3848996 aacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcacctttgatgggtcgaaaattggtgcgaaa 3848914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 44945613 - 44945699
Alignment:
Q  236 gaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||| |||| |||| |||||| ||||||| | ||||||||||||||| ||||| ||  | | ||||||| ||||||||||    
T  44945613 gaggaacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaa 44945699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 12455303 - 12455416
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||| ||||| | ||||||| || |  ||| |||||| ||||||| | |||||||||||||||  |||||||| | ||||||    
T  12455303 ccggggaataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgg 12455402  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  12455403 aaaccggtgcgaaa 12455416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 39201602 - 39201513
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtg 317  Q
    |||| |||| ||||||| ||||||  |||  ||||| ||||||| |||||||||||||||||| |||| ||| | ||||||||| |||||    
T  39201602 attctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 36480499 - 36480436
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||| ||||||| ||||||||||   |||||||||| ||||| ||||| ||||||||||||||||    
T  36480499 cgcatgcctctacgcatgagccgga---gtcgtccacctttgatgggtcgaaaatcggtgcgaaaac 36480436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 16034980 - 16035043
Alignment:
Q  259 gcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| || |||||| |||||||||||||||  ||||||||||  |||||||| ||||||||||    
T  16034980 gcatgcctatacgtacgagccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaa 16035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 24179590 - 24179645
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtcca 293  Q
    ||||||||||||||  ||| | |||| ||||||| |||||||||||||||||||||    
T  24179590 ggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtcca 24179645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 30721939 - 30721888
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    ||||||||  ||||| ||| |||||||||||||||||||| |||||||||||    
T  30721939 ggaacaacacttggtcagtgcgcatgtctctacgtatgagtcggattagtcg 30721888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 331494 - 331580
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| ||||||  |||||| ||||||||||||||||| |||||    
T  331494 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacc 331580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 1773700 - 1773642
Alignment:
Q  266 tctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    |||||| |||||  |||||||||||||||||||| | ||||| ||| ||||||||||||    
T  1773700 tctacgcatgagttggattagtcgtccaccattggtgggtcgaaaaccggtgcgaaaac 1773642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 8410143 - 8410237
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||  ||||  ||| |||||| ||||||| | ||||||||||||||| ||||  |||   ||||||||| ||||||||||    
T  8410143 attcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaa 8410237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 318
Target Start/End: Original strand, 10669604 - 10669694
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||||||||  |||||||| ||||  ||| |||||||||||||| | ||| ||||||| |||| |||| ||| | ||||||||| ||||||    
T  10669604 attcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtgc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 11069890 - 11069984
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||| ||||||||||||||  ||| |||||  ||||||| | |||| | |||||||||||||| ||| | ||||||||| || |||||||    
T  11069890 attccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaa 11069984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 25549752 - 25549830
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||||| ||||| |||| | |||| ||||||| | ||||||||||||||||||| | ||||| | ||| ||||||||||    
T  25549752 aacaacatttggctagtgcacatgcctctacgcacgagccggattagtcgtccatctttgatggatcgtaaatcggtgc 25549830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 27725952 - 27726046
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||| |||||||||||| | ||||  ||| |||||| ||||||| |  |||||||||||||| |||||| || | ||||||||| ||||| ||||    
T  27725952 attctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaa 27726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 38005414 - 38005508
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||| | ||||||||| ||||  ||| |||||| ||||||  ||||||||||||||||| ||||| ||| | | |||||||  |||||||||    
T  38005414 attcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtggatcggaaactggtgcgaaa 38005508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 10046541 - 10046488
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||| ||||||| ||||||||||||||||| ||||| ||| | |||||||||    
T  10046541 cgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaa 10046488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 18649136 - 18649059
Alignment:
Q  213 gggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    ||||||| ||||||| |||| ||||||||||||  |||||  ||| |||||| ||||||| ||||| |||||||||||    
T  18649136 gggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatgagtcggattagtcg 18649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 34738390 - 34738337
Alignment:
Q  265 ctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    ||||||| | ||| |||||||||||||||||| || ||||||||||| ||||||    
T  34738390 ctctacgcacgagtcggattagtcgtccaccaatggtaggtcggaaaccggtgc 34738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 44773321 - 44773369
Alignment:
Q  274 tgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||  |||| ||||| ||||||||| ||||||||||    
T  44773321 tgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaa 44773369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 4479403 - 4479295
Alignment:
Q  215 gaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatc 313  Q
    ||||| ||||||| ||||||||| ||||||||| ||||  ||| |||||| ||||||| |||||| |||||||||||||||| ||| | ||||||||| |    
T  4479403 gaataccggattcgattcccagg-ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaacc 4479305  T
Q  314 ggtgcgaaaa 323  Q
    ||||||||||    
T  4479304 ggtgcgaaaa 4479295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 43027321 - 43027415
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||| |||   | | |||||| ||||||| ||||||||||||||||||||| | ||||| ||||||||| || |||||||    
T  43027321 attcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaa 43027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Complemental strand, 2467231 - 2467118
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||| ||||| ||||||||  ||||  ||| |||||||||||| | |||||||||||||||||||||| |||| |  |||||    
T  2467231 ccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtcgtccacaattggtgtgtcgg 2467132  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  2467131 aaaccggtgcgaaa 2467118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 10927603 - 10927716
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||| ||||||||||||| ||||  ||| |||||| ||||||| |||||||||||||||||| |||| ||  | ||||||    
T  10927603 ccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgg 10927702  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| || |||||||    
T  10927703 aaaccgatgcgaaa 10927716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 45521166 - 45521278
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||| | ||| |||||| ||||||| |||||||||||||||||  |||| ||||| ||||||    
T  45521166 ccggggaataccgggttcgattcccagg-ggaacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcgg 45521264  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  45521265 aaaccggtgcgaaa 45521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 6100469 - 6100555
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    |||||||||| ||| ||| ||||||||||||||||||| ||||  ||| |||||| | ||||| |||||||||||||||||| ||||    
T  6100469 ccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtcgttcacc 6100555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 14846573 - 14846685
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| |||| |||| ||||||| | ||||| ||| |||||| ||||||| ||||| | ||| ||||||||||| ||| | ||||||    
T  14846573 ccggggaataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccacctttggtgggtcgg 14846671  T
Q  309 aaatcggtgcgaaa 322  Q
    ||||||||||||||    
T  14846672 aaatcggtgcgaaa 14846685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 324
Target Start/End: Complemental strand, 15884666 - 15884554
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaa 310  Q
    |||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||||||    
T  15884666 ggggaataccgggttcgattcccagg-ggaacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaa 15884568  T
Q  311 atcggtgcgaaaac 324  Q
    | ||||||||||||    
T  15884567 accggtgcgaaaac 15884554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 993234 - 993298
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||||||||||||||  |||||||||||||||| ||| | | || |||||||||||||||    
T  993234 cgcatgtctctacgtatgagttggattagtcgtccacctttggtggttcagaaatcggtgcgaaa 993298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 43032904 - 43033011
Alignment:
Q  216 aataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcg 314  Q
    |||| ||||||| ||||||||| ||||||||| ||||  ||| |||||| ||||||  | ||||||||||||||| ||||| ||| | |||| |||| ||    
T  43032904 aatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccg 43033003  T
Q  315 gtgcgaaa 322  Q
    ||||||||    
T  43033004 gtgcgaaa 43033011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 68192 - 68102
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||| |||||||||||||||||||  |||| ||||| || |||  | ||||||||||| |||| |||| ||||| ||||||||| ||||||    
T  68192 attctcaggaggaacaacgtttggccagtatgcatgcctttacacacgagccggattaatcgttcacctttgatgggtcggaaaccggtgc 68102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 3379861 - 3379811
Alignment:
Q  273 atgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaa 323  Q
    ||||| ||||||||||||||||  ||| | |||||||||||||||||||||    
T  3379861 atgagtcggattagtcgtccacttttggtgggtcggaaatcggtgcgaaaa 3379811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 22958796 - 22958853
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    ||||||| | ||||| |||  ||||||||||| | |||||||||||||||||||||||    
T  22958796 ggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacc 22958853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 26570978 - 26571023
Alignment:
Q  266 tctacgtatgagccggattagtcgtccaccattgataggtcggaaa 311  Q
    |||||| ||||||||||||||||||||||| |||||  ||||||||    
T  26570978 tctacgcatgagccggattagtcgtccacctttgatgagtcggaaa 26571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 8997628 - 8997544
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||| |  ||| |||||| || |||| ||||||| |||||||||| || | ||| | ||||||||| ||||||||||    
T  8997628 ggaacaacgtttcgccagttcgcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaa 8997544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 9860106 - 9860018
Alignment:
Q  212 ggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattg 299  Q
    |||||||| ||| ||| ||||||||| ||||||||  ||||  |||  ||||| ||||||  ||||||| |||||||||||||||||||    
T  9860106 ggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattg 9860018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 18374056 - 18374116
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgc 318  Q
    |||||| ||||||| ||||||||||||||||||||| | ||| | ||||| ||| ||||||    
T  18374056 cgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgc 18374116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 34613891 - 34613831
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctcta 269  Q
    |||||||||| ||| ||| |||||||||||||||||||| |||  |||||||||| |||||    
T  34613891 ccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctcta 34613831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 36662450 - 36662486
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccac 294  Q
    |||||| |||||||||||| |||||||||||||||||    
T  36662450 cgcatgcctctacgtatgaaccggattagtcgtccac 36662486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 155805 - 155711
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| |||| |||| |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||||||  ||||||||||    
T  155805 attcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaa 155711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 6851 - 6964
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||  ||| |||||| ||||||| |||||||||||||||||  |||| ||| | ||||||    
T  6851 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcgg 6950  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  6951 aaaccggtgcgaaa 6964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 8795 - 8701
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||||||| ||||  ||| ||| || ||||||| |||||| |||||||||||||||| ||| | |||||||||  |||||||||    
T  8795 attcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 8701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 65236 - 65152
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||  ||| |||||||||||||| |||||| ||||||||||  |||  ||||||| ||||||| ||||||||||    
T  65236 ggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcgctcacttttgatagatcggaaaccggtgcgaaa 65152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 42915 - 42832
Alignment:
Q  239 gaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| | ||||| ||| |||||| ||||||  ||||||||||||||||| ||||| ||| | ||||||||| ||||||||||    
T  42915 gaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 42832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 9845 - 9927
Alignment:
Q  214 ggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacc 295  Q
    |||||| ||||||| ||| ||||| ||||||||| ||||  ||| |||||| ||||||| | |||||||||||||||||||||    
T  9845 ggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacc 9927  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 26202 - 26292
Alignment:
Q  232 ccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||| ||||||||| ||||  |||  ||||| ||||||| | |||||||||||||||||||| ||||||  |||||||| | ||||||||    
T  26202 ccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaaaccagtgcgaaa 26292  T

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Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 12666 - 12779
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| ||||  ||||||||||||| ||||  |||  ||||| ||||||| | || |||||||||||| ||||| ||||| |||| |    
T  12666 ccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacctttgatgggtcag 12765  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  12766 aaaccggtgcgaaa 12779  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 271168 - 271107
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcg 289  Q
    ||||||||| ||||||||| ||||| ||| |||||||||||||| | ||||||| |||||||    
T  271168 attcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggttagtcg 271107  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 250089 - 250025
Alignment:
Q  258 cgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||| ||||||| | |||||||||||||||  | || ||| | ||||||||||||||||||||    
T  250089 cgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaa 250025  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 322
Target Start/End: Original strand, 566 - 679
Alignment:
Q  210 ccggggaataacggattc-attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcgg 308  Q
    |||||||||| ||| ||| |||| |||| ||||||||  ||| | |||  ||||| ||||||||||||||| |||||||||  |||| ||| | ||||||    
T  566 ccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtcgctcacctttggtgggtcgg 665  T
Q  309 aaatcggtgcgaaa 322  Q
    ||| ||||||||||    
T  666 aaaccggtgcgaaa 679  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 319447 - 319531
Alignment:
Q  238 ggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||||| ||||  ||| |||||  ||||| | |||||| |||||||||||||||| ||| | || |||||| ||||||||||    
T  319447 ggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaa 319531  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 95063 - 94984
Alignment:
Q  240 aacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccacca-ttgataggtcggaaatcggtgc 318  Q
    |||||||||||   ||| |||||| || |||| ||||||||||||||||| |||||| ||| | ||||||||||||||||    
T  95063 aacaacgtttgaccagtgcgcatgcctttacgcatgagccggattagtcgcccaccatttggtgggtcggaaatcggtgc 94984  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 320
Target Start/End: Original strand, 68532 - 68621
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcga 320  Q
    ||||||||| ||||||||| ||||   || |||||| ||||||| | ||||||||||||||| ||||| ||| | ||||| ||| ||||||||    
T  68532 attcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 224369 - 224426
Alignment:
Q  265 ctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    ||||||| | ||||||||||||||||||| | ||| | ||||||||| ||||||||||    
T  224369 ctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaa 224426  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 324
Target Start/End: Original strand, 19270 - 19366
Alignment:
Q  228 attcccaggaggaacaacgtttggttagtacgcatgtctctacgtatgagccggattagtcgtccaccattgataggtcggaaatcggtgcgaaaac 324  Q
    ||||| ||| ||||||||| |||| |||| ||||   ||||||| ||||||||||||||||| |||  |||  | | ||||||| ||||||||||||    
T  19270 attcctagggggaacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcggccattattagtggatcggaaaccggtgcgaaaac 19366  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 311
Target Start/End: Original strand, 17452 - 17488
Alignment:
Q  275 gagccggattagtcgtccaccattgataggtcggaaa 311  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  17452 gagccggattagtcgcccaccattgatgggtcggaaa 17488  T

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Target: scaffold0079 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 8232 - 8272
Alignment:
Q  282 attagtcgtccaccattgataggtcggaaatcggtgcgaaa 322  Q
    |||||||||||||| ||| ||||||||||| ||||||||||    
T  8232 attagtcgtccacctttggtaggtcggaaaccggtgcgaaa 8272  T

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