View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10931_low_19 (Length: 263)
Name: NF10931_low_19
Description: NF10931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10931_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 6265182 - 6265434
Alignment:
| Q |
1 |
ctccttaaacaatctcacaaattcttacggtagataagttcaaataagttttagcaactcccaaatacaatagattctcaaactttctctaacaatattt |
100 |
Q |
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| T |
6265182 |
ctccttaaacaatctcacaagttcttacaatagataagttcaaataagttttagcaactcccaaatacaatagattctcaaactttctctaacaatattt |
6265281 |
T |
|
| Q |
101 |
gatttggaacaagttcttttcaatgatat--accacgaagttccttgattactttttgtaatagtgattgaatatgatgcaagaaagttcaatgaactta |
198 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6265282 |
gatttggaacaagttcttttcaatgatatataccacgaagttccttgattactttttgtaatagtgattgaatatgatgcaagaaagttcaatgaactta |
6265381 |
T |
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| Q |
199 |
aaagaatgatgtcctttcttgattgtttagtgggagtggagcattctctcttc |
251 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
6265382 |
aaagaatgatgtccttttttgattgtttagtgggagtggagcattctctcttc |
6265434 |
T |
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