View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10931_low_23 (Length: 244)
Name: NF10931_low_23
Description: NF10931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10931_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 45554135 - 45554344
Alignment:
| Q |
15 |
agcagagatgcgaataagatgtttgaaacgcgaagtagtttcaatcctcctaatcaattggcggcaaaggcaccggcagattcgaagcttcagtcctcat |
114 |
Q |
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| T |
45554135 |
agcaaagatgcgaataagatgtttgaaacgcgaagtagtttcaatcctcctaatcaattggcggcaaaggcaccggcagattcgaagcttcagtcctcat |
45554234 |
T |
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| Q |
115 |
cctcatcctcatcgtgtttctgattctgatgcagcagcaacacagcttgcccgttaccatatctcacgcaatgaaatccaactcgcccgtcacgtgttcg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
45554235 |
cctcatcctcatcgtgtttctgattctgatgcagcagcaacacagcttgcccgttaccatatctcacgtaatgaaatccaactcgcccgtcacgtgttcg |
45554334 |
T |
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| Q |
215 |
accaaattcc |
224 |
Q |
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|||||||||| |
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| T |
45554335 |
accaaattcc |
45554344 |
T |
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