View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10931_low_26 (Length: 211)
Name: NF10931_low_26
Description: NF10931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10931_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 31563946 - 31563763
Alignment:
| Q |
10 |
gcagcagcagagacggcagtattaccaaaaggtgtgaacgaaggtggctcatggggaagaggattcatcctgcctggaggaggtcttaaaggtggcattc |
109 |
Q |
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| T |
31563946 |
gcagcagcagagacggcagtattaccaaaaggtgtgaacgaaggtggctcatggggaagaggattcatcctgcctggaggaggtcttaaaggtggcattc |
31563847 |
T |
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| Q |
110 |
cagaatggatagttcccactctcccaggaggaggattcaattcaaatggcgatccgacagcagcaaaagctcccatcgattgat |
193 |
Q |
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| T |
31563846 |
cagaatggatagttcccactctcccaggaggaggattcaattcaaatggcgatccgacaacagcaaaagctcccatcgattgat |
31563763 |
T |
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