View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10932_high_11 (Length: 326)
Name: NF10932_high_11
Description: NF10932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10932_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 19 - 311
Target Start/End: Original strand, 13870211 - 13870501
Alignment:
| Q |
19 |
aaaactacctgtctcctccgacttccaccaccacctatcctctcctcccactcttctccaattcctaattacctccaaaagactattgcacaaaatggtt |
118 |
Q |
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| T |
13870211 |
aaaactacctgtctcctccgacttccaccaccacctatcctctcctcccactcttctccaattcccaattacctccaaaagactattgcacaaaatggtt |
13870310 |
T |
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| Q |
119 |
tcccacacaaagagttttcttcgtcaaaccaaagaccaatagcctacttcccagttaagttaattgttgcattgaactgattccggccaggaagagcatc |
218 |
Q |
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| T |
13870311 |
tcccacaca--gagttttcttcgtcaaaccaaagacaaatagcctacttcccagttaagttgattgttccattgaactgattccggccaggaagagcatc |
13870408 |
T |
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| Q |
219 |
cttaacggcgagagtgttgtcatccacggtaacctcaacttcctccttcctgacacctctgaacacatacacactcaaaaacaacagagtcct |
311 |
Q |
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|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13870409 |
cttaacggtgagagtgttgtcatccacagtaacctcaacttcctccttcctgacacctctgaacacatacacactcaaaaacaacagagtcct |
13870501 |
T |
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