View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10932_low_12 (Length: 301)
Name: NF10932_low_12
Description: NF10932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10932_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 1865740 - 1866032
Alignment:
| Q |
1 |
gttaatccaaatatcggagatgcatctgttacaccaatcactaatgttgaacctaactcacgttctatgaatggagcaattctggatcatacaaagactt |
100 |
Q |
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| T |
1865740 |
gttaatccaaatatcggagatgcatatgttacaccaatcactaatgttgaacctaactcacgttctgtgaatggagcaattctggatcatacaaagactt |
1865839 |
T |
|
| Q |
101 |
cttctaatgaactattgtctagaaattttagctttccagaagagtcttctcatgcttctttgtttttaggtatgtattctctcttatgtttatgtggatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1865840 |
cttctaatgaactattgtctagaaattttagctttccagaagagtcttctcatgcttctttgtttttaggtatgtattctctcttatgtttatgtggatt |
1865939 |
T |
|
| Q |
201 |
aatgtgacccatttttcaattgttacatataaaaatgtattcttagttacaaagtatagtttgaattaatcaatgcaggtagtagttcatctc |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1865940 |
aatgtgacccatttttcaattgttacatataaaaatgtattcttagttacaaagtatagtttgaattaatcaatgcaggtagtagttcatctc |
1866032 |
T |
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